Wall clock time and date at job start Sat Mar 6 2021 02:51:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42906 * 114.00034 * 2 1 4 4 C 1.53007 * 112.84872 * 69.96892 * 3 2 1 5 5 F 1.39908 * 109.46744 * 283.05891 * 4 3 2 6 6 F 1.39899 * 109.47199 * 43.05599 * 4 3 2 7 7 F 1.39893 * 109.47167 * 163.05965 * 4 3 2 8 8 C 1.53779 * 113.61554 * 298.77301 * 3 2 1 9 9 C 1.53778 * 87.07816 * 270.79694 * 8 3 2 10 10 H 1.09001 * 113.61804 * 219.93309 * 9 8 3 11 11 C 1.52999 * 113.61320 * 89.11632 * 9 8 3 12 12 O 1.45211 * 109.47253 * 174.99864 * 11 9 8 13 13 C 1.34221 * 117.00170 * 180.02562 * 12 11 9 14 14 O 1.20832 * 120.00337 * 359.97438 * 13 12 11 15 15 C 1.50701 * 120.00234 * 180.02562 * 13 12 11 16 16 C 1.53001 * 109.46683 * 294.99875 * 15 13 12 17 17 O 1.42901 * 109.47061 * 175.00127 * 15 13 12 18 18 C 1.35903 * 116.99394 * 205.61914 * 17 15 13 19 19 C 1.38736 * 120.05320 * 174.17221 * 18 17 15 20 20 C 1.38142 * 119.93996 * 179.74359 * 19 18 17 21 21 C 1.38259 * 120.06044 * 0.49927 * 20 19 18 22 22 C 1.50701 * 119.94616 * 179.74581 * 21 20 19 23 23 O 1.42895 * 109.47045 * 120.02672 * 22 21 20 24 24 Si 1.86294 * 109.47025 * 0.02562 * 22 21 20 25 25 C 1.38270 * 120.11189 * 359.77299 * 21 20 19 26 26 C 1.38146 * 120.05047 * 359.97403 * 25 21 20 27 27 C 1.53781 * 113.69139 * 201.23152 * 3 2 1 28 28 H 1.08998 * 109.46803 * 179.04847 * 1 2 3 29 29 H 1.09000 * 109.47194 * 299.05483 * 1 2 3 30 30 H 1.08999 * 109.46818 * 59.04910 * 1 2 3 31 31 H 1.08995 * 113.61344 * 156.25129 * 8 3 2 32 32 H 1.08995 * 113.69116 * 25.35411 * 8 3 2 33 33 H 1.08996 * 109.47523 * 55.00136 * 11 9 8 34 34 H 1.08997 * 109.47605 * 294.99709 * 11 9 8 35 35 H 1.08996 * 109.47066 * 54.99766 * 15 13 12 36 36 H 1.08996 * 109.47281 * 299.99760 * 16 15 13 37 37 H 1.08999 * 109.47196 * 60.00112 * 16 15 13 38 38 H 1.08998 * 109.46637 * 179.97438 * 16 15 13 39 39 H 1.08006 * 120.02729 * 359.97438 * 19 18 17 40 40 H 1.08004 * 119.96633 * 180.22512 * 20 19 18 41 41 H 1.09001 * 109.47251 * 240.02679 * 22 21 20 42 42 H 0.96709 * 113.99909 * 300.00081 * 23 22 21 43 43 H 1.48499 * 110.00247 * 58.68105 * 24 22 21 44 44 H 1.48507 * 110.00027 * 179.97438 * 24 22 21 45 45 H 1.07996 * 119.97392 * 179.97438 * 25 21 20 46 46 H 1.08001 * 120.02232 * 180.02562 * 26 25 21 47 47 H 1.09003 * 113.61610 * 334.58513 * 27 3 2 48 48 H 1.08999 * 113.61182 * 203.67864 * 27 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 6 1.8107 2.0447 1.3247 5 9 0.4991 2.5262 1.3970 6 9 2.0444 1.1667 2.3885 7 9 2.7059 3.1171 1.3998 8 6 1.6413 2.1441 -1.2350 9 6 2.8780 1.5377 -1.9188 10 1 3.4356 2.2513 -2.5253 11 6 2.5904 0.2283 -2.6561 12 8 3.7837 -0.2013 -3.3632 13 6 3.6984 -1.3417 -4.0657 14 8 2.6610 -1.9610 -4.0889 15 6 4.8967 -1.8507 -4.8248 16 6 5.2475 -0.8669 -5.9429 17 8 4.5947 -3.1274 -5.3912 18 6 5.6425 -3.9589 -5.6318 19 6 5.4141 -5.2565 -6.0665 20 6 6.4810 -6.0979 -6.3155 21 6 7.7751 -5.6514 -6.1220 22 6 8.9369 -6.5734 -6.3889 23 8 9.7711 -6.0075 -7.4017 24 14 8.2984 -8.2268 -6.9625 25 6 8.0052 -4.3604 -5.6834 26 6 6.9419 -3.5133 -5.4380 27 6 3.4607 1.3361 -0.5100 28 1 -0.3633 -1.0275 -0.0171 29 1 -0.3633 0.4991 0.8983 30 1 -0.3633 0.5285 -0.8813 31 1 1.7161 3.2191 -1.0711 32 1 0.6989 1.8511 -1.6978 33 1 1.7813 0.3834 -3.3699 34 1 2.2988 -0.5372 -1.9371 35 1 5.7436 -1.9456 -4.1454 36 1 4.4005 -0.7719 -6.6223 37 1 5.4778 0.1070 -5.5109 38 1 6.1145 -1.2347 -6.4916 39 1 4.4032 -5.6072 -6.2136 40 1 6.3038 -7.1070 -6.6573 41 1 9.5144 -6.7046 -5.4738 42 1 9.3219 -5.8627 -8.2458 43 1 7.4827 -8.0577 -8.1919 44 1 9.4345 -9.1451 -7.2298 45 1 9.0169 -4.0141 -5.5326 46 1 7.1221 -2.5049 -5.0959 47 1 3.9871 0.3896 -0.3865 48 1 4.0329 2.1902 -0.1478 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_10157686_17321610.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 02:51:20 Heat of formation + Delta-G solvation = -276.274206 kcal Electronic energy + Delta-G solvation = -37032.838342 eV Core-core repulsion = 31414.145552 eV Total energy + Delta-G solvation = -5618.692790 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.142 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -51.19125 -48.74220 -48.62226 -42.15640 -41.60862 -40.91093 -39.34982 -37.81348 -37.28963 -36.93674 -33.64737 -32.13679 -31.55684 -30.76853 -28.44853 -27.63726 -26.93113 -26.75300 -25.62112 -24.27371 -23.44593 -22.69313 -21.67849 -20.77027 -19.86202 -19.64662 -19.48760 -19.26448 -18.69978 -18.25119 -18.02710 -17.69157 -17.34026 -16.73297 -16.58605 -16.53360 -16.37897 -16.09666 -15.88041 -15.65981 -15.53904 -15.52447 -15.31436 -15.14841 -14.97192 -14.82318 -14.79845 -14.73910 -14.52187 -14.33757 -14.25738 -13.94720 -13.73606 -13.51863 -13.44923 -13.38947 -13.25871 -13.00388 -12.88661 -12.51595 -12.30724 -12.22669 -12.20717 -12.09158 -11.83323 -11.75971 -11.62130 -11.37636 -10.90488 -10.61211 -10.09465 -9.27982 -4.96357 0.18329 0.28813 0.92367 1.02366 1.28442 1.51551 1.59108 1.94495 1.96272 2.23017 2.48856 2.58529 2.60058 2.76484 3.04944 3.19977 3.34258 3.35969 3.43802 3.50888 3.56879 3.65491 3.67532 3.78577 3.81496 4.00925 4.07403 4.11899 4.18989 4.19425 4.23077 4.25699 4.30915 4.38259 4.42632 4.44265 4.49337 4.52607 4.60613 4.60872 4.63391 4.78566 4.86685 4.93803 5.12794 5.23248 5.25064 5.43168 5.56932 5.59092 6.18863 6.39219 6.59529 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.010 3.990 2 O -0.332 6.332 3 C 0.037 3.963 4 C 0.438 3.562 5 F -0.182 7.182 6 F -0.173 7.173 7 F -0.175 7.175 8 C -0.144 4.144 9 C -0.100 4.100 10 H 0.109 0.891 11 C 0.078 3.922 12 O -0.349 6.349 13 C 0.467 3.533 14 O -0.479 6.479 15 C 0.096 3.904 16 C -0.176 4.176 17 O -0.288 6.288 18 C 0.134 3.866 19 C -0.140 4.140 20 C -0.075 4.075 21 C -0.154 4.154 22 C -0.070 4.070 23 O -0.531 6.531 24 Si 0.681 3.319 25 C -0.050 4.050 26 C -0.210 4.210 27 C -0.113 4.113 28 H 0.103 0.897 29 H 0.054 0.946 30 H 0.056 0.944 31 H 0.115 0.885 32 H 0.096 0.904 33 H 0.078 0.922 34 H 0.094 0.906 35 H 0.114 0.886 36 H 0.076 0.924 37 H 0.090 0.910 38 H 0.082 0.918 39 H 0.138 0.862 40 H 0.135 0.865 41 H 0.118 0.882 42 H 0.376 0.624 43 H -0.260 1.260 44 H -0.257 1.257 45 H 0.131 0.869 46 H 0.134 0.866 47 H 0.099 0.901 48 H 0.118 0.882 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.177 2.095 -0.782 2.243 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 O -0.250 6.250 3 C -0.006 4.006 4 C 0.383 3.617 5 F -0.163 7.163 6 F -0.155 7.155 7 F -0.156 7.156 8 C -0.181 4.181 9 C -0.119 4.119 10 H 0.127 0.873 11 C 0.005 3.995 12 O -0.267 6.267 13 C 0.307 3.693 14 O -0.364 6.364 15 C 0.038 3.962 16 C -0.233 4.233 17 O -0.201 6.201 18 C 0.089 3.911 19 C -0.158 4.158 20 C -0.093 4.093 21 C -0.154 4.154 22 C -0.180 4.180 23 O -0.337 6.337 24 Si 0.583 3.417 25 C -0.068 4.068 26 C -0.229 4.229 27 C -0.150 4.150 28 H 0.122 0.878 29 H 0.073 0.927 30 H 0.074 0.926 31 H 0.133 0.867 32 H 0.115 0.885 33 H 0.096 0.904 34 H 0.112 0.888 35 H 0.131 0.869 36 H 0.095 0.905 37 H 0.109 0.891 38 H 0.101 0.899 39 H 0.156 0.844 40 H 0.152 0.848 41 H 0.136 0.864 42 H 0.223 0.777 43 H -0.184 1.184 44 H -0.182 1.182 45 H 0.149 0.851 46 H 0.151 0.849 47 H 0.117 0.883 48 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges 0.135 1.111 -0.930 1.455 hybrid contribution -0.197 1.284 -0.337 1.342 sum -0.062 2.395 -1.268 2.710 Atomic orbital electron populations 1.23161 0.79311 1.04568 1.01535 1.88098 1.21320 1.21798 1.93789 1.24042 1.00428 0.86680 0.89407 1.21148 0.74006 0.78225 0.88291 1.93194 1.37214 1.88999 1.96892 1.93223 1.94103 1.68600 1.59535 1.93177 1.68135 1.57621 1.96690 1.23610 0.99860 1.01037 0.93593 1.22114 0.97614 0.96550 0.95584 0.87271 1.23073 0.84808 0.96161 0.95458 1.86385 1.41395 1.39396 1.59476 1.22947 0.89536 0.79224 0.77583 1.90743 1.30652 1.56249 1.58722 1.21633 0.94318 0.84041 0.96236 1.22347 1.03961 0.99054 0.97943 1.86163 1.31913 1.25122 1.76939 1.19027 0.86007 0.90150 0.95919 1.20411 1.00449 0.90816 1.04135 1.20839 0.91484 0.98958 0.97985 1.20218 0.94586 0.96252 1.04360 1.24945 0.93663 1.04224 0.95140 1.86596 1.39513 1.83628 1.23984 0.95041 0.82376 0.77357 0.86940 1.20810 0.98864 0.92308 0.94847 1.21351 0.91825 1.01632 1.08054 1.23285 0.91556 1.05780 0.94337 0.87836 0.92690 0.92589 0.86694 0.88533 0.90402 0.88768 0.86883 0.90481 0.89141 0.89914 0.84407 0.84786 0.86429 0.77650 1.18443 1.18221 0.85114 0.84880 0.88252 0.86333 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.45 101.05 1.06 1.04 16 2 O -0.33 -0.09 8.35 -35.23 -0.29 -0.39 16 3 C 0.04 -0.03 0.85 -89.81 -0.08 -0.11 16 4 C 0.44 0.31 2.61 37.16 0.10 0.41 16 5 F -0.18 -0.20 15.43 2.25 0.03 -0.17 16 6 F -0.17 -0.45 17.09 2.25 0.04 -0.41 16 7 F -0.17 -0.11 15.83 2.25 0.04 -0.07 16 8 C -0.14 0.43 6.48 -25.92 -0.17 0.26 16 9 C -0.10 0.28 4.21 -89.81 -0.38 -0.10 16 10 H 0.11 -0.43 8.14 -51.93 -0.42 -0.85 16 11 C 0.08 -0.06 5.05 37.16 0.19 0.13 16 12 O -0.35 0.00 10.21 -39.23 -0.40 -0.40 16 13 C 0.47 0.79 7.29 36.01 0.26 1.05 16 14 O -0.48 -2.50 16.26 -25.47 -0.41 -2.91 16 15 C 0.10 -0.03 2.74 -27.88 -0.08 -0.11 16 16 C -0.18 0.40 9.17 37.16 0.34 0.74 16 17 O -0.29 -0.61 9.33 -39.34 -0.37 -0.98 16 18 C 0.13 0.15 6.61 -39.22 -0.26 -0.11 16 19 C -0.14 -0.09 9.99 -39.43 -0.39 -0.48 16 20 C -0.08 0.03 8.66 -39.61 -0.34 -0.31 16 21 C -0.15 0.04 5.39 -104.60 -0.56 -0.53 16 22 C -0.07 0.04 2.82 36.01 0.10 0.14 16 23 O -0.53 -0.44 12.77 -35.23 -0.45 -0.89 16 24 Si 0.68 -0.75 29.78 -169.99 -5.06 -5.81 16 25 C -0.05 0.01 9.60 -39.60 -0.38 -0.37 16 26 C -0.21 0.08 8.27 -39.43 -0.33 -0.25 16 27 C -0.11 0.24 6.89 -25.92 -0.18 0.06 16 28 H 0.10 -0.23 8.14 -51.93 -0.42 -0.66 16 29 H 0.05 -0.05 6.56 -51.93 -0.34 -0.39 16 30 H 0.06 -0.15 6.45 -51.93 -0.34 -0.49 16 31 H 0.11 -0.45 8.08 -51.93 -0.42 -0.87 16 32 H 0.10 -0.34 6.43 -51.93 -0.33 -0.68 16 33 H 0.08 -0.08 8.13 -51.93 -0.42 -0.50 16 34 H 0.09 0.05 6.12 -51.93 -0.32 -0.27 16 35 H 0.11 -0.28 6.27 -51.93 -0.33 -0.60 16 36 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 37 H 0.09 -0.34 8.14 -51.93 -0.42 -0.76 16 38 H 0.08 -0.23 6.98 -51.93 -0.36 -0.60 16 39 H 0.14 -0.02 8.06 -52.48 -0.42 -0.44 16 40 H 0.13 -0.30 4.87 -52.48 -0.26 -0.56 16 41 H 0.12 -0.15 7.96 -51.93 -0.41 -0.56 16 42 H 0.38 -0.70 8.70 45.56 0.40 -0.31 16 43 H -0.26 -0.22 7.11 56.52 0.40 0.18 16 44 H -0.26 -0.60 7.11 56.52 0.40 -0.19 16 45 H 0.13 -0.13 8.06 -52.49 -0.42 -0.56 16 46 H 0.13 -0.33 5.45 -52.49 -0.29 -0.62 16 47 H 0.10 -0.16 8.10 -51.93 -0.42 -0.59 16 48 H 0.12 -0.38 6.99 -51.93 -0.36 -0.74 16 LS Contribution 402.13 15.07 6.06 6.06 Total: 0.00 -8.24 402.13 -7.85 -16.09 By element: Atomic # 1 Polarization: -5.65 SS G_CDS: -5.93 Total: -11.59 kcal Atomic # 6 Polarization: 2.56 SS G_CDS: -1.10 Total: 1.46 kcal Atomic # 8 Polarization: -3.64 SS G_CDS: -1.93 Total: -5.57 kcal Atomic # 9 Polarization: -0.76 SS G_CDS: 0.11 Total: -0.65 kcal Atomic # 14 Polarization: -0.75 SS G_CDS: -5.06 Total: -5.81 kcal Total LS contribution 6.06 Total: 6.06 kcal Total: -8.24 -7.85 -16.09 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_10157686_17321610.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -260.180 kcal (2) G-P(sol) polarization free energy of solvation -8.241 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -268.421 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.853 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.094 kcal (6) G-S(sol) free energy of system = (1) + (5) -276.274 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds