Wall clock time and date at job start Sat Mar 6 2021 01:30:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42909 * 1 3 3 Si 1.86296 * 109.47057 * 2 1 4 4 C 1.50700 * 109.46982 * 119.99823 * 2 1 3 5 5 C 1.35485 * 126.08024 * 244.97129 * 4 2 1 6 6 N 1.34957 * 108.98615 * 179.75282 * 5 4 2 7 7 C 1.37697 * 108.73016 * 0.44289 * 6 5 4 8 8 C 1.46493 * 126.26750 * 179.82696 * 7 6 5 9 9 O 1.21621 * 120.00256 * 179.68816 * 8 7 6 10 10 O 1.34897 * 119.99685 * 359.69036 * 8 7 6 11 11 C 1.45198 * 116.99664 * 179.97438 * 10 8 7 12 12 C 1.53001 * 109.46656 * 179.97438 * 11 10 8 13 13 H 1.09006 * 109.47166 * 180.02562 * 12 11 10 14 14 O 1.42964 * 109.47606 * 300.00162 * 12 11 10 15 15 C 1.43122 * 113.88659 * 178.72315 * 14 12 11 16 16 C 1.53256 * 108.92598 * 302.23379 * 15 14 12 17 17 H 1.09004 * 109.57942 * 294.45223 * 16 15 14 18 18 N 1.46499 * 109.57675 * 174.19453 * 16 15 14 19 19 C 1.34525 * 124.45789 * 120.25450 * 18 16 15 20 20 O 1.21444 * 125.71383 * 359.71639 * 19 18 16 21 21 C 1.47822 * 108.57653 * 179.97438 * 19 18 16 22 22 C 1.40938 * 105.87999 * 359.97438 * 21 19 18 23 23 C 1.38566 * 119.81405 * 179.97438 * 22 21 19 24 24 C 1.38610 * 119.72302 * 0.02562 * 23 22 21 25 25 C 1.38224 * 120.46025 * 359.97252 * 24 23 22 26 26 C 1.38567 * 134.29291 * 180.02562 * 21 19 18 27 27 C 1.34523 * 124.45983 * 300.22943 * 18 16 15 28 28 O 1.21438 * 125.70944 * 0.05958 * 27 18 16 29 29 C 1.53262 * 108.95121 * 54.32025 * 16 15 14 30 30 O 1.42972 * 109.47286 * 60.00312 * 12 11 10 31 31 C 1.37997 * 107.47204 * 359.56519 * 7 6 5 32 32 H 0.96705 * 113.99435 * 300.00052 * 1 2 3 33 33 H 1.09001 * 109.46989 * 239.99570 * 2 1 3 34 34 H 1.48501 * 110.00021 * 178.68493 * 3 2 1 35 35 H 1.48506 * 109.99925 * 299.99811 * 3 2 1 36 36 H 1.07995 * 125.50351 * 0.02652 * 5 4 2 37 37 H 0.97000 * 125.63477 * 180.26741 * 6 5 4 38 38 H 1.09003 * 109.47273 * 60.00416 * 11 10 8 39 39 H 1.08998 * 109.47783 * 299.99684 * 11 10 8 40 40 H 1.08999 * 109.67845 * 182.33667 * 15 14 12 41 41 H 1.08998 * 109.45286 * 61.99901 * 15 14 12 42 42 H 1.08008 * 120.13849 * 180.02562 * 23 22 21 43 43 H 1.08007 * 119.77048 * 180.02562 * 24 23 22 44 44 H 1.07998 * 119.77280 * 180.02562 * 25 24 23 45 45 H 1.08000 * 120.14283 * 0.02562 * 26 21 19 46 46 H 1.09001 * 109.55801 * 65.38044 * 29 16 15 47 47 H 1.09000 * 109.55863 * 185.59185 * 29 16 15 48 48 H 1.08000 * 126.51889 * 180.28863 * 31 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.6341 -0.1500 2.2443 6 7 2.9011 -1.0962 3.1689 7 6 2.3707 -2.2932 2.7426 8 6 2.4410 -3.5735 3.4510 9 8 1.9250 -4.5641 2.9696 10 8 3.0780 -3.6538 4.6374 11 6 3.1077 -4.9540 5.2829 12 6 3.8682 -4.8489 6.6064 13 1 3.8910 -5.8251 7.0909 14 8 5.2057 -4.4114 6.3542 15 6 5.9962 -4.2525 7.5367 16 6 5.3033 -3.2509 8.4670 17 1 5.2911 -2.2663 7.9996 18 7 6.0263 -3.1814 9.7393 19 6 6.5835 -2.0631 10.2379 20 8 6.5715 -0.9692 9.7106 21 6 7.2184 -2.3901 11.5321 22 6 6.9868 -3.7649 11.7389 23 6 7.4672 -4.3799 12.8839 24 6 8.1720 -3.6376 13.8186 25 6 8.3992 -2.2894 13.6157 26 6 7.9240 -1.6605 12.4756 27 6 6.2199 -4.2272 10.5629 28 8 5.8300 -5.3614 10.3721 29 6 3.8653 -3.7176 8.7184 30 8 3.2119 -3.9081 7.4598 31 6 1.7557 -2.0649 1.5285 32 1 -0.3932 0.4417 0.7651 33 1 1.7924 -0.5139 -0.8900 34 1 3.5347 1.7703 0.0320 35 1 1.5615 2.4678 -1.2086 36 1 2.9287 0.8872 2.3050 37 1 3.3885 -0.9566 3.9959 38 1 3.6085 -5.6712 4.6325 39 1 2.0881 -5.2879 5.4749 40 1 6.9848 -3.8791 7.2699 41 1 6.0914 -5.2139 8.0415 42 1 7.2930 -5.4332 13.0475 43 1 8.5471 -4.1163 14.7112 44 1 8.9501 -1.7218 14.3511 45 1 8.1032 -0.6065 12.3230 46 1 3.8779 -4.6582 9.2691 47 1 3.3327 -2.9630 9.2973 48 1 1.2367 -2.7939 0.9238 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_10542844_13594054.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 01:30:23 Heat of formation + Delta-G solvation = -146.084254 kcal Electronic energy + Delta-G solvation = -39085.089324 eV Core-core repulsion = 33653.906110 eV Total energy + Delta-G solvation = -5431.183214 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 415.128 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -43.74814 -42.52604 -41.42249 -40.70312 -39.88834 -39.64963 -37.61809 -37.46975 -37.10602 -37.05001 -34.62890 -32.65477 -32.42148 -31.92229 -30.93535 -29.82296 -27.49375 -26.68746 -26.41153 -25.58767 -24.85178 -23.64204 -23.58084 -22.41337 -21.35504 -21.07919 -20.91833 -19.88916 -19.13066 -19.09057 -18.84968 -18.22708 -17.80711 -17.67483 -17.53868 -17.20243 -17.15015 -16.89606 -16.54380 -16.26016 -16.16051 -16.05731 -16.03240 -15.67185 -15.35362 -15.29727 -15.24177 -15.01271 -14.75908 -14.70985 -14.51146 -14.30470 -14.07108 -13.99293 -13.89417 -13.59051 -13.52220 -13.41380 -12.93354 -12.79597 -12.45047 -12.20672 -12.18841 -11.94915 -11.77384 -11.75925 -11.69604 -11.57946 -10.95264 -10.84233 -10.50740 -10.48296 -10.34224 -9.97243 -9.39144 -5.01596 -1.22731 -0.31578 0.23685 0.74704 0.84431 1.35425 1.45322 1.50143 1.60258 1.68647 2.04113 2.08914 2.13537 2.19798 2.23839 2.31665 2.32417 2.99863 3.12425 3.22109 3.30817 3.44639 3.56938 3.63835 3.64173 3.70962 3.81276 3.87049 3.88931 3.92529 3.97756 4.02919 4.06257 4.10311 4.10816 4.19794 4.28447 4.37564 4.41210 4.48529 4.55384 4.64050 4.69793 4.83836 4.85797 4.94075 5.02392 5.24628 5.27679 5.34885 5.43252 5.58824 5.72817 5.76985 5.90880 6.28944 6.35048 6.73535 6.76218 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.032 4.032 3 Si 0.686 3.314 4 C -0.217 4.217 5 C 0.047 3.953 6 N -0.518 5.518 7 C -0.045 4.045 8 C 0.538 3.462 9 O -0.498 6.498 10 O -0.343 6.343 11 C 0.089 3.911 12 C 0.244 3.756 13 H 0.090 0.910 14 O -0.371 6.371 15 C 0.048 3.952 16 C 0.075 3.925 17 H 0.129 0.871 18 N -0.570 5.570 19 C 0.577 3.423 20 O -0.454 6.454 21 C -0.141 4.141 22 C -0.143 4.143 23 C -0.041 4.041 24 C -0.093 4.093 25 C -0.092 4.092 26 C -0.042 4.042 27 C 0.576 3.424 28 O -0.458 6.458 29 C 0.047 3.953 30 O -0.370 6.370 31 C -0.065 4.065 32 H 0.378 0.622 33 H 0.112 0.888 34 H -0.257 1.257 35 H -0.255 1.255 36 H 0.179 0.821 37 H 0.428 0.572 38 H 0.100 0.900 39 H 0.101 0.899 40 H 0.110 0.890 41 H 0.075 0.925 42 H 0.144 0.856 43 H 0.145 0.855 44 H 0.146 0.854 45 H 0.145 0.855 46 H 0.075 0.925 47 H 0.110 0.890 48 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.234 2.749 9.476 10.737 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.144 4.144 3 Si 0.588 3.412 4 C -0.224 4.224 5 C -0.092 4.092 6 N -0.112 5.112 7 C -0.155 4.155 8 C 0.383 3.617 9 O -0.385 6.385 10 O -0.260 6.260 11 C 0.015 3.985 12 C 0.149 3.851 13 H 0.107 0.893 14 O -0.290 6.290 15 C -0.030 4.030 16 C -0.027 4.027 17 H 0.147 0.853 18 N -0.316 5.316 19 C 0.366 3.634 20 O -0.324 6.324 21 C -0.144 4.144 22 C -0.146 4.146 23 C -0.060 4.060 24 C -0.111 4.111 25 C -0.110 4.110 26 C -0.061 4.061 27 C 0.365 3.635 28 O -0.329 6.329 29 C -0.030 4.030 30 O -0.289 6.289 31 C -0.091 4.091 32 H 0.225 0.775 33 H 0.129 0.871 34 H -0.181 1.181 35 H -0.180 1.180 36 H 0.196 0.804 37 H 0.267 0.733 38 H 0.118 0.882 39 H 0.119 0.881 40 H 0.128 0.872 41 H 0.093 0.907 42 H 0.162 0.838 43 H 0.163 0.837 44 H 0.163 0.837 45 H 0.163 0.837 46 H 0.093 0.907 47 H 0.128 0.872 48 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 4.354 2.771 7.790 9.344 hybrid contribution 0.534 -0.831 0.650 1.182 sum 4.887 1.940 8.440 9.944 Atomic orbital electron populations 1.86506 1.17436 1.81744 1.49059 1.24366 0.84757 1.09063 0.96198 0.95159 0.80566 0.77707 0.87777 1.19881 1.08151 0.94949 0.99389 1.21859 1.02163 0.94900 0.90267 1.41846 1.42679 1.07261 1.19419 1.19298 1.12637 0.84558 0.99005 1.19786 0.75453 0.87531 0.78945 1.90941 1.44363 1.36345 1.66900 1.86641 1.70149 1.35431 1.33793 1.23102 1.01605 0.83557 0.90230 1.23689 0.79785 0.91656 0.89957 0.89324 1.88242 1.22977 1.87884 1.29941 1.23037 0.95241 0.98750 0.85939 1.22643 0.93073 1.04433 0.82532 0.85346 1.46452 1.52157 1.11616 1.21375 1.18413 0.77063 0.83133 0.84787 1.90850 1.54869 1.22520 1.64124 1.20462 1.02786 0.95053 0.96122 1.20455 1.02582 0.94886 0.96717 1.20865 0.93678 1.00956 0.90498 1.21565 0.96327 0.94171 0.99039 1.21566 0.97716 0.95000 0.96720 1.20871 0.93165 1.00691 0.91324 1.18459 0.78252 0.83915 0.82840 1.90818 1.48002 1.18414 1.75695 1.23027 0.90686 1.03002 0.86285 1.88249 1.49766 1.63880 1.27052 1.21256 0.98493 0.95971 0.93368 0.77528 0.87052 1.18137 1.18004 0.80418 0.73266 0.88196 0.88140 0.87209 0.90656 0.83781 0.83675 0.83664 0.83746 0.90654 0.87194 0.82852 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.57 12.88 -35.23 -0.45 -1.02 16 2 C -0.03 -0.01 3.02 36.01 0.11 0.10 16 3 Si 0.69 -0.94 30.60 -169.99 -5.20 -6.14 16 4 C -0.22 -0.15 5.43 -105.02 -0.57 -0.72 16 5 C 0.05 -0.06 10.43 -17.16 -0.18 -0.24 16 6 N -0.52 0.17 6.07 -9.53 -0.06 0.11 16 7 C -0.04 -0.11 7.10 -81.99 -0.58 -0.69 16 8 C 0.54 2.10 7.93 34.06 0.27 2.37 16 9 O -0.50 -3.15 16.68 -19.36 -0.32 -3.47 16 10 O -0.34 -0.94 10.03 -47.62 -0.48 -1.42 16 11 C 0.09 0.09 5.56 37.16 0.21 0.30 16 12 C 0.24 0.17 3.60 37.16 0.13 0.30 16 13 H 0.09 -0.10 8.14 -51.93 -0.42 -0.53 16 14 O -0.37 -0.60 10.43 -63.30 -0.66 -1.26 16 15 C 0.05 0.01 6.34 37.29 0.24 0.25 16 16 C 0.08 0.01 3.07 -67.66 -0.21 -0.20 16 17 H 0.13 0.07 7.59 -51.93 -0.39 -0.32 16 18 N -0.57 -0.16 2.53 -110.22 -0.28 -0.44 16 19 C 0.58 0.55 8.02 -12.45 -0.10 0.45 16 20 O -0.45 -1.53 17.44 5.41 0.09 -1.43 16 21 C -0.14 0.10 6.40 -104.83 -0.67 -0.57 16 22 C -0.14 0.12 6.40 -104.84 -0.67 -0.55 16 23 C -0.04 0.11 10.09 -39.32 -0.40 -0.28 16 24 C -0.09 0.40 10.03 -39.45 -0.40 0.01 16 25 C -0.09 0.40 10.04 -39.45 -0.40 0.00 16 26 C -0.04 0.11 10.09 -39.32 -0.40 -0.29 16 27 C 0.58 0.31 7.35 -12.46 -0.09 0.22 16 28 O -0.46 -1.03 15.17 5.42 0.08 -0.95 16 29 C 0.05 0.01 6.33 37.29 0.24 0.24 16 30 O -0.37 -0.56 10.44 -63.30 -0.66 -1.22 16 31 C -0.06 -0.17 10.60 -39.09 -0.41 -0.59 16 32 H 0.38 -1.11 8.70 45.56 0.40 -0.71 16 33 H 0.11 0.11 7.96 -51.93 -0.41 -0.31 16 34 H -0.26 -0.20 7.11 56.52 0.40 0.20 16 35 H -0.26 -0.57 7.11 56.52 0.40 -0.17 16 36 H 0.18 -0.81 6.20 -52.49 -0.33 -1.14 16 37 H 0.43 -0.97 8.96 -40.82 -0.37 -1.34 16 38 H 0.10 0.03 8.14 -51.93 -0.42 -0.39 16 39 H 0.10 0.02 8.14 -51.93 -0.42 -0.40 16 40 H 0.11 -0.07 8.14 -51.93 -0.42 -0.49 16 41 H 0.08 0.03 6.68 -51.93 -0.35 -0.32 16 42 H 0.14 -0.58 8.06 -52.48 -0.42 -1.01 16 43 H 0.15 -0.97 8.06 -52.48 -0.42 -1.39 16 44 H 0.15 -0.97 8.06 -52.49 -0.42 -1.39 16 45 H 0.14 -0.56 8.06 -52.49 -0.42 -0.99 16 46 H 0.08 0.02 6.68 -51.93 -0.35 -0.32 16 47 H 0.11 -0.08 8.14 -51.93 -0.42 -0.51 16 48 H 0.15 0.47 8.06 -52.49 -0.42 0.04 16 LS Contribution 418.09 15.07 6.30 6.30 Total: 0.00 -11.57 418.09 -10.74 -22.31 By element: Atomic # 1 Polarization: -6.25 SS G_CDS: -5.22 Total: -11.47 kcal Atomic # 6 Polarization: 4.00 SS G_CDS: -3.88 Total: 0.12 kcal Atomic # 7 Polarization: 0.01 SS G_CDS: -0.34 Total: -0.33 kcal Atomic # 8 Polarization: -8.38 SS G_CDS: -2.40 Total: -10.78 kcal Atomic # 14 Polarization: -0.94 SS G_CDS: -5.20 Total: -6.14 kcal Total LS contribution 6.30 Total: 6.30 kcal Total: -11.57 -10.74 -22.31 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_10542844_13594054.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -123.777 kcal (2) G-P(sol) polarization free energy of solvation -11.568 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -135.344 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.740 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.308 kcal (6) G-S(sol) free energy of system = (1) + (5) -146.084 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds