Wall clock time and date at job start Sat Mar 6 2021 01:30:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42909 * 1 3 3 Si 1.86296 * 109.47057 * 2 1 4 4 C 1.50700 * 109.46982 * 119.99823 * 2 1 3 5 5 C 1.35485 * 126.08024 * 244.97129 * 4 2 1 6 6 N 1.34957 * 108.98615 * 179.75282 * 5 4 2 7 7 C 1.37697 * 108.73016 * 0.44289 * 6 5 4 8 8 C 1.46493 * 126.26750 * 179.82696 * 7 6 5 9 9 O 1.21621 * 120.00256 * 179.68816 * 8 7 6 10 10 O 1.34897 * 119.99685 * 359.69036 * 8 7 6 11 11 C 1.45198 * 116.99664 * 179.97438 * 10 8 7 12 12 C 1.53001 * 109.46656 * 179.97438 * 11 10 8 13 13 H 1.09006 * 109.47166 * 180.02562 * 12 11 10 14 14 O 1.42964 * 109.47606 * 300.00162 * 12 11 10 15 15 C 1.43122 * 113.88659 * 178.72315 * 14 12 11 16 16 C 1.53256 * 108.92598 * 302.23379 * 15 14 12 17 17 H 1.09004 * 109.57942 * 294.45223 * 16 15 14 18 18 N 1.46499 * 109.57675 * 174.19453 * 16 15 14 19 19 C 1.34525 * 124.45789 * 120.25450 * 18 16 15 20 20 O 1.21444 * 125.71383 * 359.71639 * 19 18 16 21 21 C 1.47822 * 108.57653 * 179.97438 * 19 18 16 22 22 C 1.40938 * 105.87999 * 359.97438 * 21 19 18 23 23 C 1.38566 * 119.81405 * 179.97438 * 22 21 19 24 24 C 1.38610 * 119.72302 * 0.02562 * 23 22 21 25 25 C 1.38224 * 120.46025 * 359.97252 * 24 23 22 26 26 C 1.38567 * 134.29291 * 180.02562 * 21 19 18 27 27 C 1.34523 * 124.45983 * 300.22943 * 18 16 15 28 28 O 1.21438 * 125.70944 * 0.05958 * 27 18 16 29 29 C 1.53262 * 108.95121 * 54.32025 * 16 15 14 30 30 O 1.42972 * 109.47286 * 60.00312 * 12 11 10 31 31 C 1.37997 * 107.47204 * 359.56519 * 7 6 5 32 32 H 0.96705 * 113.99435 * 300.00052 * 1 2 3 33 33 H 1.09001 * 109.46989 * 239.99570 * 2 1 3 34 34 H 1.48501 * 110.00021 * 178.68493 * 3 2 1 35 35 H 1.48506 * 109.99925 * 299.99811 * 3 2 1 36 36 H 1.07995 * 125.50351 * 0.02652 * 5 4 2 37 37 H 0.97000 * 125.63477 * 180.26741 * 6 5 4 38 38 H 1.09003 * 109.47273 * 60.00416 * 11 10 8 39 39 H 1.08998 * 109.47783 * 299.99684 * 11 10 8 40 40 H 1.08999 * 109.67845 * 182.33667 * 15 14 12 41 41 H 1.08998 * 109.45286 * 61.99901 * 15 14 12 42 42 H 1.08008 * 120.13849 * 180.02562 * 23 22 21 43 43 H 1.08007 * 119.77048 * 180.02562 * 24 23 22 44 44 H 1.07998 * 119.77280 * 180.02562 * 25 24 23 45 45 H 1.08000 * 120.14283 * 0.02562 * 26 21 19 46 46 H 1.09001 * 109.55801 * 65.38044 * 29 16 15 47 47 H 1.09000 * 109.55863 * 185.59185 * 29 16 15 48 48 H 1.08000 * 126.51889 * 180.28863 * 31 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.6341 -0.1500 2.2443 6 7 2.9011 -1.0962 3.1689 7 6 2.3707 -2.2932 2.7426 8 6 2.4410 -3.5735 3.4510 9 8 1.9250 -4.5641 2.9696 10 8 3.0780 -3.6538 4.6374 11 6 3.1077 -4.9540 5.2829 12 6 3.8682 -4.8489 6.6064 13 1 3.8910 -5.8251 7.0909 14 8 5.2057 -4.4114 6.3542 15 6 5.9962 -4.2525 7.5367 16 6 5.3033 -3.2509 8.4670 17 1 5.2911 -2.2663 7.9996 18 7 6.0263 -3.1814 9.7393 19 6 6.5835 -2.0631 10.2379 20 8 6.5715 -0.9692 9.7106 21 6 7.2184 -2.3901 11.5321 22 6 6.9868 -3.7649 11.7389 23 6 7.4672 -4.3799 12.8839 24 6 8.1720 -3.6376 13.8186 25 6 8.3992 -2.2894 13.6157 26 6 7.9240 -1.6605 12.4756 27 6 6.2199 -4.2272 10.5629 28 8 5.8300 -5.3614 10.3721 29 6 3.8653 -3.7176 8.7184 30 8 3.2119 -3.9081 7.4598 31 6 1.7557 -2.0649 1.5285 32 1 -0.3932 0.4417 0.7651 33 1 1.7924 -0.5139 -0.8900 34 1 3.5347 1.7703 0.0320 35 1 1.5615 2.4678 -1.2086 36 1 2.9287 0.8872 2.3050 37 1 3.3885 -0.9566 3.9959 38 1 3.6085 -5.6712 4.6325 39 1 2.0881 -5.2879 5.4749 40 1 6.9848 -3.8791 7.2699 41 1 6.0914 -5.2139 8.0415 42 1 7.2930 -5.4332 13.0475 43 1 8.5471 -4.1163 14.7112 44 1 8.9501 -1.7218 14.3511 45 1 8.1032 -0.6065 12.3230 46 1 3.8779 -4.6582 9.2691 47 1 3.3327 -2.9630 9.2973 48 1 1.2367 -2.7939 0.9238 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_10542844_13594054.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 01:30:22 Heat of formation + Delta-G solvation = -148.126594 kcal Electronic energy + Delta-G solvation = -39085.177887 eV Core-core repulsion = 33653.906110 eV Total energy + Delta-G solvation = -5431.271777 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 415.128 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -43.72710 -42.62072 -41.51100 -40.87162 -39.96787 -39.48860 -37.72780 -37.64351 -37.19698 -37.13906 -34.58227 -32.70923 -32.17360 -31.92021 -31.00185 -29.84818 -27.53762 -26.75489 -26.36655 -25.52220 -24.89852 -23.65985 -23.49866 -22.37290 -21.49377 -21.06860 -20.95418 -19.97900 -19.20681 -19.00644 -18.91416 -18.33935 -17.78816 -17.74956 -17.54322 -17.36699 -17.18522 -16.94995 -16.54848 -16.26819 -16.21388 -16.10554 -15.90208 -15.50057 -15.38563 -15.34679 -15.07941 -15.07605 -14.82127 -14.75980 -14.60781 -14.44178 -14.22700 -13.96417 -13.81449 -13.58200 -13.53276 -13.29405 -12.88087 -12.70809 -12.51638 -12.27854 -12.27653 -12.06594 -11.95064 -11.89684 -11.71829 -11.64424 -11.01174 -10.89058 -10.36505 -10.26989 -10.25864 -10.06146 -9.46435 -4.92663 -1.12640 -0.07267 0.05591 0.85113 0.87425 1.29704 1.39677 1.46243 1.59863 1.73620 1.93297 2.07703 2.09170 2.13394 2.18578 2.42806 2.56109 3.05291 3.12396 3.19516 3.39467 3.51121 3.52402 3.65929 3.68745 3.81960 3.89607 3.91735 4.01862 4.03061 4.03614 4.09328 4.12877 4.13726 4.19024 4.22800 4.30780 4.39416 4.44106 4.51341 4.63350 4.76681 4.79287 4.86395 4.93000 5.06154 5.17217 5.24073 5.31694 5.37853 5.49119 5.64172 5.65463 5.66863 5.90398 6.32900 6.35134 6.51704 6.90743 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.564 6.564 2 C -0.048 4.048 3 Si 0.797 3.203 4 C -0.229 4.229 5 C 0.073 3.927 6 N -0.507 5.507 7 C -0.068 4.068 8 C 0.538 3.462 9 O -0.533 6.533 10 O -0.344 6.344 11 C 0.083 3.917 12 C 0.243 3.757 13 H 0.108 0.892 14 O -0.384 6.384 15 C 0.051 3.949 16 C 0.077 3.923 17 H 0.122 0.878 18 N -0.569 5.569 19 C 0.577 3.423 20 O -0.487 6.487 21 C -0.159 4.159 22 C -0.160 4.160 23 C -0.043 4.043 24 C -0.085 4.085 25 C -0.084 4.084 26 C -0.044 4.044 27 C 0.576 3.424 28 O -0.481 6.481 29 C 0.051 3.949 30 O -0.382 6.382 31 C -0.082 4.082 32 H 0.394 0.606 33 H 0.096 0.904 34 H -0.276 1.276 35 H -0.306 1.306 36 H 0.220 0.780 37 H 0.439 0.561 38 H 0.105 0.895 39 H 0.107 0.893 40 H 0.116 0.884 41 H 0.074 0.926 42 H 0.155 0.845 43 H 0.176 0.824 44 H 0.176 0.824 45 H 0.154 0.846 46 H 0.074 0.926 47 H 0.117 0.883 48 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.685 4.040 11.949 13.836 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.372 6.372 2 C -0.157 4.157 3 Si 0.702 3.298 4 C -0.235 4.235 5 C -0.067 4.067 6 N -0.102 5.102 7 C -0.178 4.178 8 C 0.386 3.614 9 O -0.423 6.423 10 O -0.261 6.261 11 C 0.009 3.991 12 C 0.148 3.852 13 H 0.125 0.875 14 O -0.304 6.304 15 C -0.026 4.026 16 C -0.025 4.025 17 H 0.140 0.860 18 N -0.314 5.314 19 C 0.369 3.631 20 O -0.359 6.359 21 C -0.163 4.163 22 C -0.163 4.163 23 C -0.062 4.062 24 C -0.102 4.102 25 C -0.102 4.102 26 C -0.063 4.063 27 C 0.367 3.633 28 O -0.354 6.354 29 C -0.027 4.027 30 O -0.302 6.302 31 C -0.108 4.108 32 H 0.244 0.756 33 H 0.114 0.886 34 H -0.203 1.203 35 H -0.235 1.235 36 H 0.236 0.764 37 H 0.280 0.720 38 H 0.123 0.877 39 H 0.125 0.875 40 H 0.134 0.866 41 H 0.092 0.908 42 H 0.173 0.827 43 H 0.193 0.807 44 H 0.193 0.807 45 H 0.172 0.828 46 H 0.092 0.908 47 H 0.135 0.865 48 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 5.807 4.033 10.323 12.511 hybrid contribution 0.106 -1.226 -0.087 1.234 sum 5.913 2.806 10.235 12.149 Atomic orbital electron populations 1.86462 1.18022 1.82357 1.50334 1.24696 0.84581 1.10979 0.95486 0.93923 0.77339 0.73460 0.85068 1.19982 1.09082 0.94167 1.00312 1.22439 0.99614 0.96068 0.88611 1.41864 1.42057 1.06428 1.19898 1.19157 1.14239 0.85101 0.99310 1.20024 0.74773 0.87692 0.78938 1.90909 1.46057 1.37584 1.67769 1.86633 1.69756 1.36330 1.33356 1.23297 1.02228 0.83091 0.90469 1.23827 0.79329 0.92283 0.89737 0.87466 1.88218 1.23417 1.88060 1.30678 1.23043 0.95334 0.98682 0.85579 1.22576 0.93192 1.04037 0.82679 0.85957 1.46457 1.51943 1.11667 1.21291 1.18741 0.76498 0.82641 0.85265 1.90821 1.56364 1.23562 1.65159 1.20438 1.04417 0.95459 0.95966 1.20450 1.03767 0.94963 0.97166 1.21161 0.93295 1.01737 0.89988 1.21963 0.94854 0.94142 0.99265 1.21957 0.96697 0.95236 0.96277 1.21164 0.92488 1.01255 0.91367 1.18731 0.77856 0.83492 0.83189 1.90796 1.49141 1.19147 1.76308 1.23036 0.90659 1.03111 0.85848 1.88225 1.50176 1.64244 1.27539 1.21324 0.98874 0.96976 0.93644 0.75616 0.88603 1.20292 1.23453 0.76393 0.72021 0.87687 0.87531 0.86640 0.90811 0.82732 0.80699 0.80698 0.82814 0.90808 0.86522 0.84444 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.52 12.88 -148.98 -1.92 -3.44 16 2 C -0.05 -0.04 3.02 71.24 0.22 0.17 16 3 Si 0.80 -2.98 30.60 68.60 2.10 -0.88 16 4 C -0.23 -0.35 5.43 -20.12 -0.11 -0.46 16 5 C 0.07 -0.28 10.43 83.58 0.87 0.59 16 6 N -0.51 0.48 6.07 -184.06 -1.12 -0.64 16 7 C -0.07 -0.43 7.10 40.32 0.29 -0.15 16 8 C 0.54 5.29 7.93 69.97 0.55 5.85 16 9 O -0.53 -8.15 16.68 19.44 0.32 -7.83 16 10 O -0.34 -2.41 10.03 -51.81 -0.52 -2.93 16 11 C 0.08 0.29 5.56 71.98 0.40 0.69 16 12 C 0.24 0.59 3.60 71.98 0.26 0.85 16 13 H 0.11 -0.17 8.14 -2.38 -0.02 -0.19 16 14 O -0.38 -1.68 10.43 -122.14 -1.27 -2.95 16 15 C 0.05 0.08 6.34 72.07 0.46 0.54 16 16 C 0.08 0.13 3.07 45.17 0.14 0.27 16 17 H 0.12 0.35 7.59 -2.38 -0.02 0.33 16 18 N -0.57 -1.10 2.53 -739.56 -1.87 -2.97 16 19 C 0.58 1.88 8.02 86.82 0.70 2.58 16 20 O -0.49 -4.06 17.44 -3.54 -0.06 -4.12 16 21 C -0.16 0.17 6.40 -20.00 -0.13 0.04 16 22 C -0.16 0.22 6.40 -20.00 -0.13 0.10 16 23 C -0.04 0.28 10.09 22.44 0.23 0.51 16 24 C -0.08 0.94 10.03 22.36 0.22 1.17 16 25 C -0.08 0.93 10.04 22.36 0.22 1.15 16 26 C -0.04 0.27 10.09 22.44 0.23 0.50 16 27 C 0.58 1.26 7.35 86.82 0.64 1.89 16 28 O -0.48 -2.73 15.17 -3.52 -0.05 -2.78 16 29 C 0.05 0.07 6.33 72.07 0.46 0.53 16 30 O -0.38 -1.57 10.44 -122.14 -1.27 -2.84 16 31 C -0.08 -0.58 10.60 22.59 0.24 -0.34 16 32 H 0.39 -2.35 8.70 -74.05 -0.64 -2.99 16 33 H 0.10 0.32 7.96 -2.39 -0.02 0.30 16 34 H -0.28 0.07 7.11 99.48 0.71 0.77 16 35 H -0.31 -1.51 7.11 99.48 0.71 -0.80 16 36 H 0.22 -2.73 6.20 -2.91 -0.02 -2.74 16 37 H 0.44 -2.24 8.96 -92.71 -0.83 -3.08 16 38 H 0.11 0.23 8.14 -2.39 -0.02 0.21 16 39 H 0.11 0.21 8.14 -2.39 -0.02 0.19 16 40 H 0.12 0.00 8.14 -2.39 -0.02 -0.01 16 41 H 0.07 0.15 6.68 -2.39 -0.02 0.13 16 42 H 0.16 -1.41 8.06 -2.91 -0.02 -1.43 16 43 H 0.18 -2.99 8.06 -2.91 -0.02 -3.01 16 44 H 0.18 -2.97 8.06 -2.91 -0.02 -2.99 16 45 H 0.15 -1.32 8.06 -2.91 -0.02 -1.35 16 46 H 0.07 0.13 6.68 -2.39 -0.02 0.12 16 47 H 0.12 -0.04 8.14 -2.39 -0.02 -0.06 16 48 H 0.14 1.30 8.06 -2.91 -0.02 1.27 16 Total: 0.00 -29.92 418.09 -0.28 -30.20 By element: Atomic # 1 Polarization: -14.95 SS G_CDS: -0.36 Total: -15.31 kcal Atomic # 6 Polarization: 10.74 SS G_CDS: 5.75 Total: 16.49 kcal Atomic # 7 Polarization: -0.62 SS G_CDS: -2.99 Total: -3.61 kcal Atomic # 8 Polarization: -22.11 SS G_CDS: -4.78 Total: -26.89 kcal Atomic # 14 Polarization: -2.98 SS G_CDS: 2.10 Total: -0.88 kcal Total: -29.92 -0.28 -30.20 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_10542844_13594054.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -117.927 kcal (2) G-P(sol) polarization free energy of solvation -29.916 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -147.843 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.283 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.199 kcal (6) G-S(sol) free energy of system = (1) + (5) -148.127 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds