Wall clock time and date at job start Sat Mar 6 2021 01:56:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 C 1.53003 * 109.47428 * 2 1 4 4 C 1.53003 * 109.47360 * 240.00147 * 2 1 3 5 5 O 1.42896 * 109.47446 * 120.00242 * 2 1 3 6 6 C 1.42904 * 114.00189 * 60.00107 * 5 2 1 7 7 H 1.09005 * 112.84485 * 18.80281 * 6 5 2 8 8 C 1.53775 * 113.61891 * 150.00110 * 6 5 2 9 9 C 1.53777 * 87.08025 * 139.98049 * 8 6 5 10 10 H 1.09004 * 113.61440 * 89.20276 * 9 8 6 11 11 C 1.53005 * 113.61386 * 220.01981 * 9 8 6 12 12 O 1.45204 * 109.46880 * 185.00162 * 11 9 8 13 13 C 1.34897 * 116.99992 * 179.97438 * 12 11 9 14 14 O 1.21626 * 119.99805 * 0.02562 * 13 12 11 15 15 C 1.46483 * 120.00125 * 179.97438 * 13 12 11 16 16 C 1.37999 * 126.26203 * 180.33993 * 15 13 12 17 17 C 1.39795 * 106.96656 * 180.15820 * 16 15 13 18 18 C 1.50706 * 126.08036 * 179.84177 * 17 16 15 19 19 O 1.42895 * 109.46849 * 64.71097 * 18 17 16 20 20 Si 1.86294 * 109.47281 * 184.71579 * 18 17 16 21 21 C 1.35491 * 107.84403 * 359.57662 * 17 16 15 22 22 N 1.34955 * 108.98450 * 0.26654 * 21 17 16 23 23 C 1.53772 * 87.08556 * 334.56807 * 9 8 6 24 24 H 1.08996 * 109.47426 * 299.99464 * 1 2 3 25 25 H 1.09002 * 109.46930 * 60.00248 * 1 2 3 26 26 H 1.09006 * 109.46742 * 179.97438 * 1 2 3 27 27 H 1.08997 * 109.47507 * 179.97438 * 3 2 1 28 28 H 1.08998 * 109.47012 * 300.00530 * 3 2 1 29 29 H 1.09004 * 109.46603 * 59.99621 * 3 2 1 30 30 H 1.09000 * 109.47045 * 300.00090 * 4 2 1 31 31 H 1.09006 * 109.46934 * 59.99976 * 4 2 1 32 32 H 1.09001 * 109.47537 * 179.97438 * 4 2 1 33 33 H 1.09005 * 113.61124 * 25.43729 * 8 6 5 34 34 H 1.08999 * 113.61504 * 254.53283 * 8 6 5 35 35 H 1.08999 * 109.46909 * 65.00462 * 11 9 8 36 36 H 1.09001 * 109.47203 * 304.99982 * 11 9 8 37 37 H 1.07993 * 126.51641 * 359.97438 * 16 15 13 38 38 H 1.09001 * 109.46694 * 304.71563 * 18 17 16 39 39 H 0.96705 * 113.99673 * 180.02562 * 19 18 17 40 40 H 1.48504 * 109.99879 * 178.68194 * 20 18 17 41 41 H 1.48501 * 109.99823 * 299.99844 * 20 18 17 42 42 H 1.08003 * 125.50700 * 180.28436 * 21 17 16 43 43 H 0.97000 * 125.63425 * 179.97438 * 22 21 17 44 44 H 1.09002 * 113.61964 * 139.97668 * 23 9 8 45 45 H 1.08997 * 113.61834 * 270.88607 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2493 5 8 2.0063 -0.6737 1.1667 6 6 1.5848 -2.0356 1.2644 7 1 1.2523 -2.4452 0.3105 8 6 2.5838 -2.9380 2.0077 9 6 1.3668 -3.6120 2.6629 10 1 0.9746 -4.4542 2.0929 11 6 1.5713 -3.9403 4.1433 12 8 0.4217 -4.6758 4.6392 13 6 0.4439 -5.0448 5.9365 14 8 1.3984 -4.7588 6.6339 15 6 -0.6822 -5.7891 6.5056 16 6 -0.7976 -6.2231 7.8105 17 6 -2.0227 -6.8886 7.9122 18 6 -2.5799 -7.5377 9.1530 19 8 -2.8304 -6.5374 10.1422 20 14 -4.1717 -8.4110 8.7357 21 6 -2.6230 -6.8413 6.6984 22 7 -1.8219 -6.1784 5.8381 23 6 0.6077 -2.2964 2.4230 24 1 -0.3634 0.5137 0.8900 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3633 -1.0277 -0.0005 27 1 3.1300 1.4425 0.0005 28 1 1.6766 1.9564 -0.8899 29 1 1.6766 1.9563 0.8900 30 1 1.6767 -1.7489 -1.2493 31 1 1.6767 -0.2073 -2.1393 32 1 3.1300 -0.7208 -1.2495 33 1 3.2171 -2.3998 2.7130 34 1 3.1478 -3.5993 1.3500 35 1 1.6821 -3.0151 4.7087 36 1 2.4690 -4.5474 4.2602 37 1 -0.0769 -6.0790 8.6018 38 1 -1.8603 -8.2592 9.5399 39 1 -3.1907 -6.8843 10.9699 40 1 -4.7148 -9.0819 9.9441 41 1 -5.1612 -7.4381 8.2069 42 1 -3.5869 -7.2651 6.4583 43 1 -2.0166 -6.0053 4.9037 44 1 -0.4236 -2.4398 2.1005 45 1 0.7009 -1.5829 3.2417 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_10542844_14598394.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 01:56:20 Heat of formation + Delta-G solvation = -95.157788 kcal Electronic energy + Delta-G solvation = -25332.543737 eV Core-core repulsion = 21511.549092 eV Total energy + Delta-G solvation = -3820.994645 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.166 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -42.52285 -41.22763 -40.57673 -38.53638 -37.75052 -37.13814 -33.92777 -32.79904 -31.12427 -29.64707 -28.43825 -28.35417 -26.72559 -26.58933 -24.74394 -23.38995 -21.37982 -20.92380 -20.89653 -20.54976 -19.51454 -18.42855 -18.14102 -17.71349 -17.43210 -16.93326 -16.50953 -16.00127 -15.83765 -15.67322 -15.17645 -15.06099 -14.68601 -14.61626 -14.43405 -14.22649 -13.96666 -13.88833 -13.51618 -13.38718 -13.36021 -13.19114 -13.07062 -12.85788 -12.71204 -12.56856 -12.42580 -12.22908 -11.98278 -11.89330 -11.78837 -11.50960 -11.36916 -11.21197 -10.42672 -10.38817 -9.96552 -9.39377 -4.97731 0.23599 1.27496 1.46314 1.53180 1.60970 1.96728 2.06157 2.14819 2.67893 3.35932 3.45873 3.48498 3.64971 3.70855 3.82949 3.87618 3.93806 3.93993 4.03064 4.03596 4.08918 4.18229 4.23432 4.41107 4.46308 4.51703 4.59139 4.63515 4.69743 4.71393 4.74113 4.77458 4.83943 4.85665 4.87644 4.93708 5.02478 5.05483 5.09768 5.23908 5.26404 5.31669 5.40181 5.58181 5.75916 6.27181 6.37733 6.54320 6.78720 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C 0.104 3.896 3 C -0.139 4.139 4 C -0.179 4.179 5 O -0.361 6.361 6 C 0.062 3.938 7 H 0.093 0.907 8 C -0.127 4.127 9 C -0.111 4.111 10 H 0.105 0.895 11 C 0.083 3.917 12 O -0.362 6.362 13 C 0.537 3.463 14 O -0.496 6.496 15 C -0.047 4.047 16 C -0.064 4.064 17 C -0.170 4.170 18 C -0.041 4.041 19 O -0.536 6.536 20 Si 0.681 3.319 21 C 0.050 3.950 22 N -0.519 5.519 23 C -0.149 4.149 24 H 0.064 0.936 25 H 0.066 0.934 26 H 0.058 0.942 27 H 0.064 0.936 28 H 0.071 0.929 29 H 0.063 0.937 30 H 0.059 0.941 31 H 0.068 0.932 32 H 0.065 0.935 33 H 0.095 0.905 34 H 0.079 0.921 35 H 0.076 0.924 36 H 0.076 0.924 37 H 0.153 0.847 38 H 0.074 0.926 39 H 0.378 0.622 40 H -0.262 1.262 41 H -0.255 1.255 42 H 0.179 0.821 43 H 0.428 0.572 44 H 0.072 0.928 45 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.676 -3.262 -4.842 6.422 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.065 3.935 3 C -0.196 4.196 4 C -0.236 4.236 5 O -0.280 6.280 6 C 0.004 3.996 7 H 0.110 0.890 8 C -0.164 4.164 9 C -0.130 4.130 10 H 0.123 0.877 11 C 0.010 3.990 12 O -0.279 6.279 13 C 0.382 3.618 14 O -0.384 6.384 15 C -0.157 4.157 16 C -0.090 4.090 17 C -0.176 4.176 18 C -0.151 4.151 19 O -0.343 6.343 20 Si 0.582 3.418 21 C -0.089 4.089 22 N -0.114 5.114 23 C -0.187 4.187 24 H 0.083 0.917 25 H 0.085 0.915 26 H 0.077 0.923 27 H 0.083 0.917 28 H 0.090 0.910 29 H 0.082 0.918 30 H 0.078 0.922 31 H 0.087 0.913 32 H 0.084 0.916 33 H 0.114 0.886 34 H 0.097 0.903 35 H 0.094 0.906 36 H 0.094 0.906 37 H 0.171 0.829 38 H 0.092 0.908 39 H 0.225 0.775 40 H -0.186 1.186 41 H -0.179 1.179 42 H 0.196 0.804 43 H 0.267 0.733 44 H 0.090 0.910 45 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -2.851 -2.662 -5.026 6.362 hybrid contribution -0.153 0.444 0.584 0.749 sum -3.003 -2.219 -4.442 5.803 Atomic orbital electron populations 1.22468 0.95482 1.02476 1.02931 1.21546 0.93232 0.93309 0.85368 1.21772 1.02044 0.93196 1.02631 1.22473 1.02365 1.00817 0.97982 1.88046 1.73800 1.23236 1.42925 1.23565 0.95581 0.82906 0.97517 0.88952 1.23233 0.96342 0.97332 0.99504 1.22365 0.98824 0.98049 0.93732 0.87729 1.23102 0.86292 0.95944 0.93699 1.86522 1.46074 1.68294 1.27017 1.19728 0.85168 0.76700 0.80182 1.90939 1.33837 1.52771 1.60828 1.19313 0.90049 1.12812 0.93520 1.21249 0.97295 0.96971 0.93465 1.18689 0.96739 1.08613 0.93602 1.24054 1.08541 0.94019 0.88472 1.86619 1.85924 1.35056 1.26742 0.95420 0.76469 0.83167 0.86774 1.21796 0.97150 0.99932 0.90047 1.41774 1.14851 1.42195 1.12593 1.23641 0.98987 0.96340 0.99699 0.91670 0.91519 0.92326 0.91726 0.91048 0.91752 0.92245 0.91343 0.91567 0.88622 0.90259 0.90568 0.90577 0.82894 0.90763 0.77463 1.18635 1.17916 0.80390 0.73346 0.90956 0.89008 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.12 8.38 37.15 0.31 0.43 16 2 C 0.10 0.01 1.11 -90.62 -0.10 -0.09 16 3 C -0.14 0.03 8.84 37.16 0.33 0.36 16 4 C -0.18 0.15 8.38 37.16 0.31 0.46 16 5 O -0.36 -0.61 10.00 -35.23 -0.35 -0.96 16 6 C 0.06 -0.02 2.82 -25.92 -0.07 -0.09 16 7 H 0.09 -0.12 5.54 -51.93 -0.29 -0.41 16 8 C -0.13 0.11 7.47 -25.92 -0.19 -0.09 16 9 C -0.11 0.11 4.02 -89.81 -0.36 -0.25 16 10 H 0.10 -0.19 8.14 -51.93 -0.42 -0.61 16 11 C 0.08 0.06 5.32 37.16 0.20 0.26 16 12 O -0.36 -0.65 10.23 -41.03 -0.42 -1.07 16 13 C 0.54 1.99 7.93 34.05 0.27 2.26 16 14 O -0.50 -3.27 16.68 -19.36 -0.32 -3.60 16 15 C -0.05 -0.11 7.10 -82.00 -0.58 -0.69 16 16 C -0.06 -0.19 10.60 -39.09 -0.41 -0.60 16 17 C -0.17 -0.21 5.46 -105.02 -0.57 -0.78 16 18 C -0.04 0.00 3.01 36.01 0.11 0.11 16 19 O -0.54 -0.89 12.86 -35.23 -0.45 -1.35 16 20 Si 0.68 -1.15 30.60 -169.99 -5.20 -6.35 16 21 C 0.05 -0.04 10.43 -17.16 -0.18 -0.22 16 22 N -0.52 0.34 6.07 -9.53 -0.06 0.29 16 23 C -0.15 0.06 7.46 -25.92 -0.19 -0.13 16 24 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 25 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 26 H 0.06 -0.06 7.02 -51.93 -0.36 -0.42 16 27 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 28 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 29 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 30 H 0.06 -0.08 6.24 -51.93 -0.32 -0.40 16 31 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 32 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 33 H 0.10 -0.01 8.10 -51.93 -0.42 -0.43 16 34 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 35 H 0.08 0.11 7.84 -51.93 -0.41 -0.30 16 36 H 0.08 0.06 8.14 -51.93 -0.42 -0.37 16 37 H 0.15 0.47 8.06 -52.49 -0.42 0.05 16 38 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 39 H 0.38 -0.91 8.74 45.56 0.40 -0.51 16 40 H -0.26 -0.19 7.11 56.52 0.40 0.21 16 41 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 42 H 0.18 -0.72 6.20 -52.48 -0.33 -1.04 16 43 H 0.43 -1.44 8.96 -40.82 -0.37 -1.81 16 44 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 45 H 0.09 0.06 7.90 -51.93 -0.41 -0.35 16 LS Contribution 371.13 15.07 5.59 5.59 Total: 0.00 -8.04 371.13 -9.55 -17.59 By element: Atomic # 1 Polarization: -3.88 SS G_CDS: -7.19 Total: -11.07 kcal Atomic # 6 Polarization: 2.08 SS G_CDS: -1.14 Total: 0.93 kcal Atomic # 7 Polarization: 0.34 SS G_CDS: -0.06 Total: 0.29 kcal Atomic # 8 Polarization: -5.43 SS G_CDS: -1.55 Total: -6.98 kcal Atomic # 14 Polarization: -1.15 SS G_CDS: -5.20 Total: -6.35 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -8.04 -9.55 -17.59 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_10542844_14598394.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.567 kcal (2) G-P(sol) polarization free energy of solvation -8.040 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -85.608 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.550 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.591 kcal (6) G-S(sol) free energy of system = (1) + (5) -95.158 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds