Wall clock time and date at job start Sat Mar 6 2021 02:00:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.34961 * 125.62960 * 2 1 4 4 C 1.35486 * 108.98257 * 180.02562 * 3 2 1 5 5 C 1.50703 * 126.08029 * 179.97438 * 4 3 2 6 6 O 1.42896 * 109.47436 * 300.00050 * 5 4 3 7 7 Si 1.86298 * 109.47221 * 179.97438 * 5 4 3 8 8 C 1.39797 * 107.84344 * 359.73861 * 4 3 2 9 9 C 1.37694 * 125.63873 * 180.02562 * 2 1 3 10 10 C 1.46497 * 126.26196 * 359.96981 * 9 2 1 11 11 O 1.21618 * 119.99568 * 180.02562 * 10 9 2 12 12 O 1.34896 * 119.99875 * 359.97438 * 10 9 2 13 13 C 1.45194 * 116.99782 * 180.02562 * 12 10 9 14 14 C 1.52998 * 109.47089 * 180.02562 * 13 12 10 15 15 H 1.09008 * 112.84868 * 316.19827 * 14 13 12 16 16 C 1.53775 * 113.69017 * 87.46968 * 14 13 12 17 17 C 1.53779 * 87.08438 * 139.99386 * 16 14 13 18 18 H 1.09002 * 113.61731 * 89.11293 * 17 16 14 19 19 O 1.42898 * 113.68762 * 220.00851 * 17 16 14 20 20 C 1.53777 * 113.61649 * 185.00435 * 14 13 12 21 21 H 1.08994 * 109.47085 * 269.96021 * 1 2 3 22 22 H 1.09002 * 109.47320 * 29.96397 * 1 2 3 23 23 H 1.08999 * 109.47045 * 149.95541 * 1 2 3 24 24 H 1.07996 * 125.51186 * 0.05561 * 3 2 1 25 25 H 1.09000 * 109.46820 * 59.99984 * 5 4 3 26 26 H 0.96695 * 114.00334 * 179.97438 * 6 5 4 27 27 H 1.48503 * 110.00088 * 298.68156 * 7 5 4 28 28 H 1.48502 * 110.00003 * 60.00425 * 7 5 4 29 29 H 1.08003 * 126.51964 * 180.29931 * 8 4 3 30 30 H 1.09000 * 109.46819 * 60.00412 * 13 12 10 31 31 H 1.08997 * 109.47624 * 300.00331 * 13 12 10 32 32 H 1.08993 * 113.61636 * 25.43750 * 16 14 13 33 33 H 1.09008 * 113.61006 * 254.53993 * 16 14 13 34 34 H 0.96697 * 114.00154 * 279.05796 * 19 17 16 35 35 H 1.08997 * 113.61941 * 105.38293 * 20 14 13 36 36 H 1.09005 * 113.61136 * 334.48457 * 20 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2512 1.0970 0.0000 4 6 3.5493 0.7088 -0.0006 5 6 4.7485 1.6215 -0.0013 6 8 4.7191 2.4459 -1.1681 7 14 6.3064 0.5999 -0.0011 8 6 3.5785 -0.6888 0.0051 9 6 2.2673 -1.1190 -0.0005 10 6 1.8122 -2.5115 -0.0005 11 8 2.6245 -3.4167 -0.0005 12 8 0.4922 -2.7897 0.0005 13 6 0.1140 -4.1915 0.0011 14 6 -1.4115 -4.3081 0.0016 15 1 -1.8886 -3.6173 0.6969 16 6 -2.0327 -4.2937 -1.4050 17 6 -2.9983 -5.3807 -0.9042 18 1 -3.9092 -4.9831 -0.4566 19 8 -3.2542 -6.4078 -1.8642 20 6 -1.9187 -5.7546 0.1251 21 1 -0.3633 -0.0007 1.0276 22 1 -0.3634 0.8903 -0.5133 23 1 -0.3633 -0.8896 -0.5145 24 1 1.9021 2.1190 0.0009 25 1 4.7269 2.2506 0.8886 26 1 5.4628 3.0603 -1.2345 27 1 6.3642 -0.2380 1.2235 28 1 6.3483 -0.2626 -1.2092 29 1 4.4597 -1.3133 0.0108 30 1 0.5161 -4.6759 0.8909 31 1 0.5148 -4.6764 -0.8891 32 1 -1.3544 -4.6380 -2.1855 33 1 -2.5252 -3.3538 -1.6551 34 1 -3.9156 -6.1696 -2.5282 35 1 -2.3189 -5.9945 1.1101 36 1 -1.2091 -6.4985 -0.2372 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_10804114_11354868.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 02:00:08 Heat of formation + Delta-G solvation = -84.829755 kcal Electronic energy + Delta-G solvation = -20360.888122 eV Core-core repulsion = 17006.954191 eV Total energy + Delta-G solvation = -3353.933931 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 268.119 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -42.66823 -41.16893 -40.20660 -37.67318 -37.50204 -36.05860 -34.23777 -31.23647 -29.59985 -28.61231 -26.90648 -25.87485 -24.47787 -23.21615 -21.23977 -21.01846 -20.51984 -18.74815 -18.57412 -18.27557 -17.94249 -17.57661 -16.69928 -16.55505 -16.23585 -15.71047 -15.46791 -15.09984 -15.00947 -14.71903 -14.14999 -13.91184 -13.87765 -13.60324 -13.46673 -13.30666 -13.24966 -12.88963 -12.50580 -12.40226 -12.22879 -11.85514 -11.77925 -11.64069 -11.33208 -10.88019 -10.28458 -9.79334 -9.34244 -4.89092 0.17433 1.34425 1.44259 1.50462 1.71148 1.81278 2.06198 2.17627 3.06895 3.28219 3.37970 3.49112 3.58726 3.66247 3.75592 3.77098 3.97924 4.04738 4.11108 4.12864 4.15728 4.27646 4.37826 4.46612 4.51352 4.52559 4.62286 4.63102 4.77851 4.84266 4.96777 5.00898 5.19197 5.32660 5.53925 5.79210 6.03399 6.59842 6.72516 6.72650 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.063 3.937 2 N -0.415 5.415 3 C 0.070 3.930 4 C -0.176 4.176 5 C -0.033 4.033 6 O -0.550 6.550 7 Si 0.686 3.314 8 C -0.097 4.097 9 C -0.042 4.042 10 C 0.539 3.461 11 O -0.497 6.497 12 O -0.358 6.358 13 C 0.080 3.920 14 C -0.111 4.111 15 H 0.106 0.894 16 C -0.165 4.165 17 C 0.077 3.923 18 H 0.085 0.915 19 O -0.559 6.559 20 C -0.120 4.120 21 H 0.082 0.918 22 H 0.090 0.910 23 H 0.101 0.899 24 H 0.178 0.822 25 H 0.071 0.929 26 H 0.381 0.619 27 H -0.256 1.256 28 H -0.252 1.252 29 H 0.148 0.852 30 H 0.076 0.924 31 H 0.076 0.924 32 H 0.092 0.908 33 H 0.074 0.926 34 H 0.381 0.619 35 H 0.082 0.918 36 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.911 5.335 1.065 6.170 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 N -0.088 5.088 3 C -0.068 4.068 4 C -0.181 4.181 5 C -0.145 4.145 6 O -0.356 6.356 7 Si 0.587 3.413 8 C -0.123 4.123 9 C -0.152 4.152 10 C 0.384 3.616 11 O -0.385 6.385 12 O -0.276 6.276 13 C 0.006 3.994 14 C -0.129 4.129 15 H 0.124 0.876 16 C -0.203 4.203 17 C 0.018 3.982 18 H 0.103 0.897 19 O -0.365 6.365 20 C -0.157 4.157 21 H 0.100 0.900 22 H 0.109 0.891 23 H 0.120 0.880 24 H 0.195 0.805 25 H 0.088 0.912 26 H 0.228 0.772 27 H -0.181 1.181 28 H -0.177 1.177 29 H 0.166 0.834 30 H 0.095 0.905 31 H 0.094 0.906 32 H 0.110 0.890 33 H 0.092 0.908 34 H 0.228 0.772 35 H 0.100 0.900 36 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -2.870 3.478 1.318 4.698 hybrid contribution -1.017 0.256 -0.163 1.062 sum -3.887 3.733 1.155 5.512 Atomic orbital electron populations 1.22384 0.75377 1.05579 1.04384 1.43962 1.07177 1.05170 1.52538 1.21829 0.89719 0.91849 1.03365 1.18741 0.93328 0.92592 1.13468 1.23922 1.03348 0.97055 0.90143 1.86479 1.51624 1.54759 1.42746 0.95654 0.82134 0.82612 0.80904 1.21081 0.94468 0.94223 1.02514 1.19219 0.90245 0.84089 1.21622 1.19683 0.80797 0.87770 0.73324 1.90931 1.54832 1.46386 1.46328 1.86557 1.25502 1.30880 1.84664 1.23120 0.94710 0.78284 1.03262 1.22374 0.92909 0.98568 0.99065 0.87584 1.23806 0.99675 1.00001 0.96798 1.23273 0.96231 0.88281 0.90422 0.89699 1.86533 1.64451 1.41816 1.43703 1.23067 0.97727 0.95601 0.99334 0.89985 0.89112 0.88048 0.80461 0.91150 0.77195 1.18100 1.17671 0.83413 0.90531 0.90585 0.88987 0.90764 0.77152 0.89966 0.88632 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.13 10.56 59.85 0.63 0.50 16 2 N -0.41 -0.64 3.15 -120.41 -0.38 -1.02 16 3 C 0.07 0.09 11.25 -17.16 -0.19 -0.10 16 4 C -0.18 -0.51 5.44 -105.02 -0.57 -1.08 16 5 C -0.03 -0.01 2.99 36.01 0.11 0.09 16 6 O -0.55 -0.18 12.85 -35.23 -0.45 -0.63 16 7 Si 0.69 0.10 30.64 -169.99 -5.21 -5.11 16 8 C -0.10 -0.45 9.14 -39.09 -0.36 -0.81 16 9 C -0.04 -0.18 6.89 -81.99 -0.56 -0.74 16 10 C 0.54 2.56 7.92 34.06 0.27 2.83 16 11 O -0.50 -3.75 16.68 -19.36 -0.32 -4.08 16 12 O -0.36 -0.75 7.65 -41.03 -0.31 -1.06 16 13 C 0.08 0.07 5.32 37.16 0.20 0.27 16 14 C -0.11 0.14 4.02 -89.81 -0.36 -0.22 16 15 H 0.11 -0.23 8.14 -51.92 -0.42 -0.65 16 16 C -0.17 0.21 7.47 -25.92 -0.19 0.01 16 17 C 0.08 -0.08 5.21 -25.92 -0.14 -0.21 16 18 H 0.09 -0.21 8.14 -51.93 -0.42 -0.64 16 19 O -0.56 -0.29 13.67 -35.23 -0.48 -0.77 16 20 C -0.12 0.10 7.47 -25.92 -0.19 -0.09 16 21 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 22 H 0.09 -0.37 8.14 -51.93 -0.42 -0.79 16 23 H 0.10 -0.17 6.15 -51.93 -0.32 -0.49 16 24 H 0.18 -0.28 8.06 -52.49 -0.42 -0.70 16 25 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 26 H 0.38 -1.79 8.74 45.56 0.40 -1.39 16 27 H -0.26 -0.76 7.11 56.52 0.40 -0.36 16 28 H -0.25 -0.99 7.11 56.52 0.40 -0.59 16 29 H 0.15 0.75 6.38 -52.48 -0.34 0.41 16 30 H 0.08 0.08 8.14 -51.93 -0.42 -0.35 16 31 H 0.08 0.11 7.84 -51.93 -0.41 -0.29 16 32 H 0.09 -0.01 7.90 -51.93 -0.41 -0.42 16 33 H 0.07 -0.16 8.14 -51.92 -0.42 -0.58 16 34 H 0.38 -1.34 9.12 45.56 0.42 -0.93 16 35 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 36 H 0.10 0.01 8.10 -51.93 -0.42 -0.41 16 LS Contribution 309.78 15.07 4.67 4.67 Total: 0.00 -9.55 309.78 -7.93 -17.48 By element: Atomic # 1 Polarization: -5.85 SS G_CDS: -4.07 Total: -9.92 kcal Atomic # 6 Polarization: 1.81 SS G_CDS: -1.36 Total: 0.44 kcal Atomic # 7 Polarization: -0.64 SS G_CDS: -0.38 Total: -1.02 kcal Atomic # 8 Polarization: -4.97 SS G_CDS: -1.57 Total: -6.54 kcal Atomic # 14 Polarization: 0.10 SS G_CDS: -5.21 Total: -5.11 kcal Total LS contribution 4.67 Total: 4.67 kcal Total: -9.55 -7.93 -17.48 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_10804114_11354868.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.351 kcal (2) G-P(sol) polarization free energy of solvation -9.553 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.905 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.925 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.478 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.830 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds