Wall clock time and date at job start Sat Mar 6 2021 01:25:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46507 * 1 3 3 C 1.34958 * 125.63362 * 2 1 4 4 C 1.35491 * 108.98577 * 180.26590 * 3 2 1 5 5 C 1.50701 * 126.07538 * 179.75013 * 4 3 2 6 6 O 1.42891 * 109.47095 * 65.00572 * 5 4 3 7 7 Si 1.86303 * 109.46576 * 185.00015 * 5 4 3 8 8 C 1.39794 * 107.83831 * 359.73072 * 4 3 2 9 9 C 1.37690 * 125.63937 * 179.79806 * 2 1 3 10 10 C 1.46501 * 126.26366 * 0.02562 * 9 2 1 11 11 O 1.21615 * 120.00180 * 179.71441 * 10 9 2 12 12 O 1.34897 * 119.99554 * 359.71306 * 10 9 2 13 13 C 1.45201 * 117.00013 * 179.97438 * 12 10 9 14 14 C 1.52995 * 109.47257 * 180.02562 * 13 12 10 15 15 H 1.09002 * 112.85043 * 314.66653 * 14 13 12 16 16 C 1.53785 * 113.69093 * 85.93770 * 14 13 12 17 17 C 1.53779 * 87.08093 * 139.99088 * 16 14 13 18 18 H 1.09003 * 113.61186 * 89.11185 * 17 16 14 19 19 O 1.42898 * 113.68812 * 220.00737 * 17 16 14 20 20 C 1.42905 * 113.99838 * 247.53194 * 19 17 16 21 21 C 1.53005 * 109.46965 * 60.00406 * 20 19 17 22 22 C 1.52999 * 109.47295 * 180.02562 * 20 19 17 23 23 C 1.52998 * 109.47208 * 300.00335 * 20 19 17 24 24 C 1.53781 * 113.61293 * 183.47395 * 14 13 12 25 25 H 1.08997 * 109.46883 * 270.19232 * 1 2 3 26 26 H 1.08990 * 109.47036 * 30.20070 * 1 2 3 27 27 H 1.09004 * 109.46515 * 150.19592 * 1 2 3 28 28 H 1.07999 * 125.50792 * 359.97438 * 3 2 1 29 29 H 1.08997 * 109.47590 * 304.99686 * 5 4 3 30 30 H 0.96701 * 114.00370 * 59.99501 * 6 5 4 31 31 H 1.48506 * 110.00071 * 58.68101 * 7 5 4 32 32 H 1.48501 * 109.99781 * 179.97438 * 7 5 4 33 33 H 1.07999 * 126.51254 * 180.02562 * 8 4 3 34 34 H 1.09005 * 109.46726 * 59.99828 * 13 12 10 35 35 H 1.09004 * 109.46998 * 300.00593 * 13 12 10 36 36 H 1.09003 * 113.60734 * 254.54208 * 16 14 13 37 37 H 1.08996 * 113.61146 * 25.43706 * 16 14 13 38 38 H 1.09001 * 109.47209 * 59.99449 * 21 20 19 39 39 H 1.08992 * 109.47242 * 179.97438 * 21 20 19 40 40 H 1.09000 * 109.46797 * 299.99999 * 21 20 19 41 41 H 1.09000 * 109.46904 * 60.00001 * 22 20 19 42 42 H 1.08992 * 109.47169 * 180.02562 * 22 20 19 43 43 H 1.09001 * 109.46790 * 300.00496 * 22 20 19 44 44 H 1.08996 * 109.47210 * 60.00130 * 23 20 19 45 45 H 1.09001 * 109.46843 * 179.97438 * 23 20 19 46 46 H 1.08994 * 109.47066 * 299.99565 * 23 20 19 47 47 H 1.09005 * 113.61302 * 334.47929 * 24 14 13 48 48 H 1.08996 * 113.61527 * 105.30092 * 24 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2513 1.0969 0.0000 4 6 3.5494 0.7087 -0.0059 5 6 4.7486 1.6215 -0.0133 6 8 4.7889 2.3647 1.2064 7 14 6.3016 0.6049 -0.1727 8 6 3.5785 -0.6889 -0.0036 9 6 2.2674 -1.1190 0.0039 10 6 1.8123 -2.5115 0.0083 11 8 2.6245 -3.4167 0.0063 12 8 0.4923 -2.7896 0.0146 13 6 0.1140 -4.1915 0.0181 14 6 -1.4115 -4.3081 0.0244 15 1 -1.8844 -3.6353 0.7398 16 6 -2.0409 -4.2577 -1.3778 17 6 -3.0036 -5.3572 -0.8993 18 1 -3.9119 -4.9711 -0.4364 19 8 -3.2653 -6.3594 -1.8837 20 6 -4.6091 -6.3599 -2.3698 21 6 -4.9201 -5.0057 -3.0106 22 6 -4.7741 -7.4677 -3.4121 23 6 -5.5721 -6.6070 -1.2069 24 6 -1.9181 -5.7573 0.1139 25 1 -0.3633 0.0034 1.0276 26 1 -0.3633 0.8881 -0.5169 27 1 -0.3632 -0.8918 -0.5108 28 1 1.9022 2.1189 -0.0004 29 1 4.6765 2.3093 -0.8558 30 1 4.8532 1.8155 1.9998 31 1 6.2577 -0.1972 -1.4218 32 1 7.4915 1.4934 -0.1818 33 1 4.4597 -1.3133 -0.0066 34 1 0.5195 -4.6750 0.9069 35 1 0.5116 -4.6773 -0.8731 36 1 -2.5345 -3.3118 -1.6010 37 1 -1.3670 -4.5820 -2.1707 38 1 -4.2340 -4.8297 -3.8391 39 1 -5.9448 -5.0062 -3.3818 40 1 -4.8026 -4.2168 -2.2677 41 1 -4.5526 -8.4323 -2.9553 42 1 -5.7989 -7.4677 -3.7832 43 1 -4.0879 -7.2921 -4.2407 44 1 -5.4547 -5.8180 -0.4640 45 1 -6.5971 -6.6069 -1.5776 46 1 -5.3505 -7.5717 -0.7505 47 1 -1.2107 -6.4917 -0.2714 48 1 -2.3113 -6.0226 1.0952 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_10804114_14598394.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 01:25:55 Heat of formation + Delta-G solvation = -90.688787 kcal Electronic energy + Delta-G solvation = -27742.125488 eV Core-core repulsion = 23765.787015 eV Total energy + Delta-G solvation = -3976.338473 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.182 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -42.65305 -41.26316 -40.60979 -38.56874 -37.71229 -37.20144 -34.13368 -33.93174 -31.18362 -29.65507 -28.60280 -28.46208 -28.33155 -26.74428 -25.90367 -24.50227 -23.33848 -21.20520 -21.12185 -20.90054 -20.54151 -18.99231 -18.15401 -17.69444 -17.55863 -17.29290 -16.81432 -16.56568 -16.29530 -15.94885 -15.80454 -15.54698 -15.24369 -14.82571 -14.74576 -14.61171 -14.42092 -14.03648 -13.88317 -13.73873 -13.54655 -13.41523 -13.38543 -13.26349 -13.08609 -13.03334 -12.87952 -12.73552 -12.45002 -12.24362 -12.10922 -11.95597 -11.87354 -11.81769 -11.52989 -11.40008 -11.24476 -10.41904 -10.34839 -9.80891 -9.35472 -4.88272 0.20800 1.43282 1.44702 1.51305 1.70174 1.83720 2.09705 2.12188 2.64888 3.31847 3.43866 3.55275 3.57542 3.67467 3.72363 3.76884 3.82243 3.89243 3.95521 4.00844 4.03672 4.10676 4.13773 4.14833 4.32512 4.42282 4.43776 4.49130 4.49339 4.57542 4.63386 4.66167 4.68660 4.70714 4.74651 4.81594 4.83721 4.85264 4.90470 5.02022 5.02920 5.07051 5.21160 5.23898 5.29341 5.36933 5.58253 5.82592 6.04692 6.34918 6.70098 6.76279 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.063 3.937 2 N -0.415 5.415 3 C 0.065 3.935 4 C -0.218 4.218 5 C -0.031 4.031 6 O -0.546 6.546 7 Si 0.690 3.310 8 C -0.090 4.090 9 C -0.045 4.045 10 C 0.538 3.462 11 O -0.496 6.496 12 O -0.360 6.360 13 C 0.081 3.919 14 C -0.111 4.111 15 H 0.104 0.896 16 C -0.149 4.149 17 C 0.062 3.938 18 H 0.093 0.907 19 O -0.361 6.361 20 C 0.105 3.895 21 C -0.176 4.176 22 C -0.139 4.139 23 C -0.179 4.179 24 C -0.127 4.127 25 H 0.081 0.919 26 H 0.088 0.912 27 H 0.101 0.899 28 H 0.175 0.825 29 H 0.110 0.890 30 H 0.379 0.621 31 H -0.257 1.257 32 H -0.257 1.257 33 H 0.157 0.843 34 H 0.076 0.924 35 H 0.076 0.924 36 H 0.071 0.929 37 H 0.091 0.909 38 H 0.064 0.936 39 H 0.066 0.934 40 H 0.058 0.942 41 H 0.064 0.936 42 H 0.071 0.929 43 H 0.063 0.937 44 H 0.059 0.941 45 H 0.068 0.932 46 H 0.065 0.935 47 H 0.095 0.905 48 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.634 0.630 1.670 5.910 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 N -0.088 5.088 3 C -0.073 4.073 4 C -0.224 4.224 5 C -0.143 4.143 6 O -0.351 6.351 7 Si 0.592 3.408 8 C -0.116 4.116 9 C -0.154 4.154 10 C 0.383 3.617 11 O -0.384 6.384 12 O -0.277 6.277 13 C 0.008 3.992 14 C -0.130 4.130 15 H 0.122 0.878 16 C -0.187 4.187 17 C 0.005 3.995 18 H 0.110 0.890 19 O -0.280 6.280 20 C 0.066 3.934 21 C -0.233 4.233 22 C -0.197 4.197 23 C -0.236 4.236 24 C -0.164 4.164 25 H 0.100 0.900 26 H 0.107 0.893 27 H 0.120 0.880 28 H 0.192 0.808 29 H 0.128 0.872 30 H 0.226 0.774 31 H -0.182 1.182 32 H -0.182 1.182 33 H 0.174 0.826 34 H 0.094 0.906 35 H 0.094 0.906 36 H 0.090 0.910 37 H 0.110 0.890 38 H 0.083 0.917 39 H 0.085 0.915 40 H 0.077 0.923 41 H 0.083 0.917 42 H 0.090 0.910 43 H 0.082 0.918 44 H 0.077 0.923 45 H 0.087 0.913 46 H 0.084 0.916 47 H 0.114 0.886 48 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -5.017 0.439 0.693 5.084 hybrid contribution -0.804 0.408 -0.174 0.918 sum -5.821 0.847 0.519 5.905 Atomic orbital electron populations 1.22376 0.75572 1.05478 1.04378 1.43984 1.07127 1.05268 1.52449 1.21856 0.89980 0.91796 1.03683 1.19840 0.94814 0.93634 1.14147 1.24311 1.02470 0.97824 0.89658 1.86468 1.96834 1.36467 1.15324 0.94616 0.76186 0.82129 0.87888 1.21223 0.94504 0.94114 1.01762 1.19310 0.90487 0.83969 1.21674 1.19718 0.80786 0.87840 0.73351 1.90931 1.54797 1.46358 1.46289 1.86560 1.25604 1.30910 1.84644 1.23103 0.94682 0.78245 1.03203 1.22364 0.92851 0.98554 0.99193 0.87781 1.23636 0.99111 0.99274 0.96631 1.23557 0.96623 0.89448 0.89921 0.88971 1.88047 1.28432 1.54513 1.57008 1.21547 0.82441 0.95692 0.93761 1.22467 1.02508 0.96775 1.01595 1.21771 1.02228 0.97694 0.97961 1.22470 0.99961 1.02613 0.98597 1.23229 0.98097 0.95543 0.99536 0.90015 0.89294 0.88038 0.80781 0.87242 0.77411 1.18165 1.18187 0.82575 0.90574 0.90602 0.90989 0.89026 0.91684 0.91509 0.92333 0.91715 0.91041 0.91754 0.92255 0.91332 0.91557 0.88630 0.90264 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.17 10.55 59.85 0.63 0.46 16 2 N -0.41 -0.06 3.15 -120.40 -0.38 -0.44 16 3 C 0.06 -0.01 11.26 -17.16 -0.19 -0.20 16 4 C -0.22 -0.15 5.40 -105.02 -0.57 -0.72 16 5 C -0.03 -0.01 3.00 36.01 0.11 0.10 16 6 O -0.55 -0.24 12.88 -35.23 -0.45 -0.70 16 7 Si 0.69 0.06 30.66 -169.99 -5.21 -5.16 16 8 C -0.09 -0.16 9.15 -39.09 -0.36 -0.52 16 9 C -0.05 -0.10 6.88 -82.00 -0.56 -0.67 16 10 C 0.54 1.73 7.92 34.06 0.27 2.00 16 11 O -0.50 -2.89 16.68 -19.35 -0.32 -3.22 16 12 O -0.36 -0.40 7.66 -41.03 -0.31 -0.71 16 13 C 0.08 0.01 5.31 37.16 0.20 0.20 16 14 C -0.11 0.18 4.02 -89.81 -0.36 -0.18 16 15 H 0.10 -0.26 8.14 -51.93 -0.42 -0.68 16 16 C -0.15 0.17 7.47 -25.92 -0.19 -0.03 16 17 C 0.06 -0.05 2.81 -25.92 -0.07 -0.12 16 18 H 0.09 -0.16 5.54 -51.93 -0.29 -0.45 16 19 O -0.36 -0.47 10.00 -35.23 -0.35 -0.82 16 20 C 0.10 -0.02 1.11 -90.62 -0.10 -0.13 16 21 C -0.18 0.18 8.39 37.16 0.31 0.50 16 22 C -0.14 0.07 8.84 37.16 0.33 0.40 16 23 C -0.18 0.21 8.38 37.16 0.31 0.52 16 24 C -0.13 0.17 7.47 -25.92 -0.19 -0.03 16 25 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 26 H 0.09 -0.41 8.14 -51.93 -0.42 -0.83 16 27 H 0.10 -0.24 6.15 -51.93 -0.32 -0.56 16 28 H 0.17 -0.40 8.06 -52.49 -0.42 -0.83 16 29 H 0.11 0.03 7.96 -51.93 -0.41 -0.38 16 30 H 0.38 -1.17 8.70 45.56 0.40 -0.78 16 31 H -0.26 -0.74 7.11 56.52 0.40 -0.34 16 32 H -0.26 -0.78 7.11 56.52 0.40 -0.38 16 33 H 0.16 0.14 6.40 -52.49 -0.34 -0.19 16 34 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 35 H 0.08 0.06 7.87 -51.93 -0.41 -0.35 16 36 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 37 H 0.09 0.01 7.92 -51.93 -0.41 -0.40 16 38 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 39 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 40 H 0.06 -0.08 7.02 -51.93 -0.36 -0.45 16 41 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 42 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 43 H 0.06 0.00 8.14 -51.93 -0.42 -0.43 16 44 H 0.06 -0.10 6.24 -51.93 -0.32 -0.42 16 45 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 46 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 47 H 0.10 -0.05 8.10 -51.93 -0.42 -0.47 16 48 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 LS Contribution 389.01 15.07 5.86 5.86 Total: 0.00 -7.12 389.01 -9.62 -16.75 By element: Atomic # 1 Polarization: -5.16 SS G_CDS: -8.01 Total: -13.17 kcal Atomic # 6 Polarization: 2.04 SS G_CDS: -0.45 Total: 1.60 kcal Atomic # 7 Polarization: -0.06 SS G_CDS: -0.38 Total: -0.44 kcal Atomic # 8 Polarization: -4.00 SS G_CDS: -1.44 Total: -5.44 kcal Atomic # 14 Polarization: 0.06 SS G_CDS: -5.21 Total: -5.16 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -7.12 -9.62 -16.75 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_10804114_14598394.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -73.942 kcal (2) G-P(sol) polarization free energy of solvation -7.124 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -81.066 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.623 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.747 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.689 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds