Wall clock time and date at job start Sat Mar 6 2021 02:25:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46506 * 1 3 3 C 1.34959 * 125.63264 * 2 1 4 4 C 1.35483 * 108.98468 * 179.97438 * 3 2 1 5 5 C 1.50699 * 126.07805 * 180.02562 * 4 3 2 6 6 O 1.42896 * 109.47410 * 65.00062 * 5 4 3 7 7 Si 1.86310 * 109.46971 * 185.00068 * 5 4 3 8 8 C 1.39802 * 107.84307 * 359.97438 * 4 3 2 9 9 C 1.37695 * 125.63580 * 179.68886 * 2 1 3 10 10 C 1.46488 * 126.26331 * 0.02562 * 9 2 1 11 11 O 1.21626 * 120.00195 * 180.02562 * 10 9 2 12 12 O 1.34896 * 120.00390 * 359.97438 * 10 9 2 13 13 C 1.45199 * 117.00359 * 180.02562 * 12 10 9 14 14 C 1.52999 * 109.46937 * 180.02562 * 13 12 10 15 15 H 1.09004 * 109.46809 * 55.00433 * 14 13 12 16 16 C 1.52997 * 109.46864 * 175.00025 * 14 13 12 17 17 C 1.52999 * 109.47264 * 180.02562 * 16 14 13 18 18 C 1.52999 * 109.46599 * 299.99890 * 17 16 14 19 19 H 1.09004 * 109.47663 * 299.99750 * 18 17 16 20 20 O 1.42903 * 109.46962 * 179.97438 * 18 17 16 21 21 C 1.52997 * 109.47223 * 60.00084 * 18 17 16 22 22 C 1.52991 * 109.47206 * 295.00149 * 14 13 12 23 23 H 1.09001 * 109.47060 * 90.03296 * 1 2 3 24 24 H 1.09004 * 109.47073 * 210.02784 * 1 2 3 25 25 H 1.09000 * 109.47212 * 330.02867 * 1 2 3 26 26 H 1.07999 * 125.51011 * 0.02562 * 3 2 1 27 27 H 1.09001 * 109.47083 * 304.99468 * 5 4 3 28 28 H 0.96700 * 114.00200 * 179.97438 * 6 5 4 29 29 H 1.48499 * 109.99505 * 299.99810 * 7 5 4 30 30 H 1.48490 * 110.00034 * 61.31598 * 7 5 4 31 31 H 1.07995 * 126.51511 * 180.02562 * 8 4 3 32 32 H 1.09005 * 109.46906 * 300.00340 * 13 12 10 33 33 H 1.08996 * 109.47075 * 59.99928 * 13 12 10 34 34 H 1.09002 * 109.47095 * 300.00212 * 16 14 13 35 35 H 1.09005 * 109.47477 * 59.99707 * 16 14 13 36 36 H 1.09000 * 109.47546 * 59.99760 * 17 16 14 37 37 H 1.09003 * 109.47069 * 180.02562 * 17 16 14 38 38 H 0.96705 * 113.99688 * 179.97438 * 20 18 17 39 39 H 1.09000 * 109.47035 * 60.00061 * 21 18 17 40 40 H 1.09002 * 109.47095 * 179.97438 * 21 18 17 41 41 H 1.09004 * 109.47468 * 299.99880 * 22 14 13 42 42 H 1.08994 * 109.47679 * 60.00017 * 22 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2513 1.0969 0.0000 4 6 3.5494 0.7088 0.0006 5 6 4.7485 1.6214 0.0013 6 8 4.7822 2.3628 1.2225 7 14 6.3025 0.6051 -0.1512 8 6 3.5785 -0.6890 0.0015 9 6 2.2673 -1.1191 0.0061 10 6 1.8122 -2.5114 0.0131 11 8 2.6244 -3.4167 0.0186 12 8 0.4922 -2.7897 0.0146 13 6 0.1140 -4.1915 0.0222 14 6 -1.4116 -4.3081 0.0222 15 1 -1.8183 -3.7527 -0.8230 16 6 -1.8105 -5.7804 -0.0955 17 6 -3.3360 -5.8970 -0.0962 18 6 -3.8921 -5.3206 1.2074 19 1 -3.4856 -5.8758 2.0528 20 8 -5.3170 -5.4289 1.2066 21 6 -3.4931 -3.8482 1.3251 22 6 -1.9671 -3.7318 1.3260 23 1 -0.3633 -0.0006 -1.0277 24 1 -0.3633 -0.8898 0.5143 25 1 -0.3634 0.8902 0.5134 26 1 1.9022 2.1189 0.0004 27 1 4.6811 2.3106 -0.8405 28 1 5.5299 2.9720 1.2923 29 1 6.4061 -0.3387 0.9906 30 1 6.2943 -0.1462 -1.4320 31 1 4.4597 -1.3133 0.0026 32 1 0.5155 -4.6810 -0.8651 33 1 0.5154 -4.6713 0.9148 34 1 -1.4146 -6.1910 -1.0244 35 1 -1.4037 -6.3358 0.7496 36 1 -3.7426 -5.3418 -0.9415 37 1 -3.6202 -6.9460 -0.1796 38 1 -5.7382 -5.0824 2.0051 39 1 -3.8997 -3.2930 0.4798 40 1 -3.8897 -3.4375 2.2536 41 1 -1.5604 -4.2871 2.1712 42 1 -1.6830 -2.6829 1.4099 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_10804114_16737258.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 02:25:08 Heat of formation + Delta-G solvation = -128.151768 kcal Electronic energy + Delta-G solvation = -24261.200121 eV Core-core repulsion = 20594.312369 eV Total energy + Delta-G solvation = -3666.887752 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.150 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -42.67886 -41.12994 -40.06106 -37.73563 -37.67201 -36.59777 -34.24936 -32.14831 -31.97871 -30.90852 -28.71101 -27.03114 -25.65729 -24.19133 -23.86632 -22.33872 -21.23913 -21.04574 -20.77424 -18.63964 -18.29661 -18.28921 -17.98848 -17.60040 -16.86593 -16.49575 -16.22707 -15.66742 -15.60367 -15.39968 -15.08698 -14.96641 -14.78394 -14.27917 -14.11552 -13.92291 -13.75903 -13.50735 -13.41801 -13.37212 -13.26632 -13.04404 -12.64161 -12.39810 -12.27939 -12.01419 -11.84690 -11.82389 -11.67300 -11.55423 -11.23516 -10.82392 -10.24983 -9.82111 -9.36707 -4.89598 0.16612 1.35354 1.43773 1.47969 1.70527 1.80754 2.05376 2.16673 3.05563 3.40648 3.48264 3.55053 3.60023 3.65673 3.72753 3.93312 3.94502 4.02767 4.09676 4.13782 4.15480 4.21709 4.23824 4.30594 4.32227 4.36607 4.44039 4.49200 4.49935 4.65631 4.78156 4.82197 4.91243 4.93332 5.00457 5.01271 5.02065 5.16136 5.24918 5.34073 5.52937 5.78547 6.02194 6.62858 6.71881 6.72618 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.063 3.937 2 N -0.414 5.414 3 C 0.070 3.930 4 C -0.175 4.175 5 C -0.034 4.034 6 O -0.550 6.550 7 Si 0.686 3.314 8 C -0.096 4.096 9 C -0.043 4.043 10 C 0.539 3.461 11 O -0.497 6.497 12 O -0.358 6.358 13 C 0.071 3.929 14 C -0.088 4.088 15 H 0.086 0.914 16 C -0.111 4.111 17 C -0.111 4.111 18 C 0.102 3.898 19 H 0.055 0.945 20 O -0.569 6.569 21 C -0.152 4.152 22 C -0.112 4.112 23 H 0.082 0.918 24 H 0.101 0.899 25 H 0.090 0.910 26 H 0.178 0.822 27 H 0.070 0.930 28 H 0.380 0.620 29 H -0.252 1.252 30 H -0.256 1.256 31 H 0.148 0.852 32 H 0.075 0.925 33 H 0.074 0.926 34 H 0.075 0.925 35 H 0.070 0.930 36 H 0.072 0.928 37 H 0.074 0.926 38 H 0.379 0.621 39 H 0.072 0.928 40 H 0.067 0.933 41 H 0.065 0.935 42 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.223 4.603 0.080 4.764 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 N -0.088 5.088 3 C -0.068 4.068 4 C -0.181 4.181 5 C -0.145 4.145 6 O -0.356 6.356 7 Si 0.587 3.413 8 C -0.122 4.122 9 C -0.152 4.152 10 C 0.384 3.616 11 O -0.385 6.385 12 O -0.276 6.276 13 C -0.002 4.002 14 C -0.107 4.107 15 H 0.104 0.896 16 C -0.148 4.148 17 C -0.148 4.148 18 C 0.044 3.956 19 H 0.073 0.927 20 O -0.375 6.375 21 C -0.189 4.189 22 C -0.149 4.149 23 H 0.100 0.900 24 H 0.119 0.881 25 H 0.109 0.891 26 H 0.195 0.805 27 H 0.088 0.912 28 H 0.228 0.772 29 H -0.177 1.177 30 H -0.181 1.181 31 H 0.166 0.834 32 H 0.093 0.907 33 H 0.092 0.908 34 H 0.094 0.906 35 H 0.089 0.911 36 H 0.091 0.909 37 H 0.093 0.907 38 H 0.226 0.774 39 H 0.091 0.909 40 H 0.085 0.915 41 H 0.084 0.916 42 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges -1.509 2.787 -0.475 3.205 hybrid contribution -0.672 0.206 0.476 0.849 sum -2.181 2.993 0.000 3.703 Atomic orbital electron populations 1.22399 0.75373 1.05556 1.04433 1.43959 1.07163 1.05169 1.52516 1.21839 0.89729 0.91865 1.03378 1.18735 0.93280 0.92628 1.13459 1.23925 1.03292 0.98116 0.89157 1.86491 1.52590 1.58918 1.37593 0.95637 0.82298 0.82688 0.80690 1.21102 0.94467 0.94277 1.02345 1.19222 0.90245 0.84097 1.21639 1.19677 0.80804 0.87755 0.73317 1.90931 1.54852 1.46370 1.46341 1.86548 1.25458 1.30892 1.84655 1.23208 0.95543 0.78250 1.03201 1.21275 0.92064 0.97526 0.99811 0.89610 1.21476 0.95506 0.94638 1.03207 1.21439 0.94236 1.02109 0.97050 1.21846 0.80939 0.94692 0.98163 0.92664 1.86524 1.19398 1.85787 1.45750 1.22284 0.96348 0.97487 1.02819 1.21543 0.94761 1.01736 0.96889 0.89953 0.88065 0.89110 0.80482 0.91172 0.77234 1.17673 1.18114 0.83412 0.90682 0.90756 0.90595 0.91103 0.90912 0.90708 0.77360 0.90911 0.91468 0.91585 0.91058 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.13 10.57 59.85 0.63 0.50 16 2 N -0.41 -0.57 3.15 -120.40 -0.38 -0.95 16 3 C 0.07 0.08 11.26 -17.16 -0.19 -0.11 16 4 C -0.18 -0.49 5.43 -105.02 -0.57 -1.06 16 5 C -0.03 -0.01 2.99 36.01 0.11 0.10 16 6 O -0.55 -0.19 12.86 -35.23 -0.45 -0.64 16 7 Si 0.69 0.04 30.66 -169.99 -5.21 -5.18 16 8 C -0.10 -0.44 9.15 -39.09 -0.36 -0.79 16 9 C -0.04 -0.17 6.88 -82.00 -0.56 -0.73 16 10 C 0.54 2.38 7.92 34.05 0.27 2.65 16 11 O -0.50 -3.58 16.68 -19.36 -0.32 -3.90 16 12 O -0.36 -0.60 7.19 -41.03 -0.29 -0.89 16 13 C 0.07 0.02 4.85 37.16 0.18 0.20 16 14 C -0.09 0.13 2.43 -90.63 -0.22 -0.09 16 15 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 16 C -0.11 0.19 5.20 -26.73 -0.14 0.05 16 17 C -0.11 0.07 5.57 -26.73 -0.15 -0.08 16 18 C 0.10 -0.07 3.47 -26.73 -0.09 -0.16 16 19 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 20 O -0.57 -0.39 13.32 -35.23 -0.47 -0.86 16 21 C -0.15 0.25 5.55 -26.71 -0.15 0.10 16 22 C -0.11 0.19 5.11 -26.71 -0.14 0.05 16 23 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 24 H 0.10 -0.19 6.13 -51.93 -0.32 -0.51 16 25 H 0.09 -0.37 8.14 -51.93 -0.42 -0.79 16 26 H 0.18 -0.31 8.06 -52.49 -0.42 -0.73 16 27 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 28 H 0.38 -1.78 8.74 45.56 0.40 -1.38 16 29 H -0.25 -0.95 7.11 56.52 0.40 -0.54 16 30 H -0.26 -0.75 7.11 56.52 0.40 -0.34 16 31 H 0.15 0.73 6.40 -52.49 -0.34 0.40 16 32 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 33 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 34 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 35 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 36 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 37 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 38 H 0.38 -1.19 9.08 45.56 0.41 -0.78 16 39 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 40 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 41 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 42 H 0.07 -0.11 7.82 -51.93 -0.41 -0.52 16 LS Contribution 344.47 15.07 5.19 5.19 Total: 0.00 -9.28 344.47 -9.10 -18.37 By element: Atomic # 1 Polarization: -6.00 SS G_CDS: -5.78 Total: -11.77 kcal Atomic # 6 Polarization: 2.01 SS G_CDS: -1.38 Total: 0.62 kcal Atomic # 7 Polarization: -0.57 SS G_CDS: -0.38 Total: -0.95 kcal Atomic # 8 Polarization: -4.75 SS G_CDS: -1.54 Total: -6.29 kcal Atomic # 14 Polarization: 0.04 SS G_CDS: -5.21 Total: -5.18 kcal Total LS contribution 5.19 Total: 5.19 kcal Total: -9.28 -9.10 -18.37 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_10804114_16737258.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -109.778 kcal (2) G-P(sol) polarization free energy of solvation -9.276 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -119.053 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.098 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.374 kcal (6) G-S(sol) free energy of system = (1) + (5) -128.152 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds