Wall clock time and date at job start Sat Mar 6 2021 03:00:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42898 * 114.00165 * 2 1 4 4 C 1.53004 * 112.84677 * 66.01899 * 3 2 1 5 5 F 1.39903 * 109.47050 * 283.56639 * 4 3 2 6 6 F 1.39901 * 109.47262 * 43.56556 * 4 3 2 7 7 F 1.39899 * 109.46998 * 163.56705 * 4 3 2 8 8 C 1.53775 * 113.61375 * 294.82494 * 3 2 1 9 9 C 1.53787 * 87.08133 * 270.79458 * 8 3 2 10 10 H 1.08994 * 113.62003 * 219.93825 * 9 8 3 11 11 C 1.53002 * 113.61075 * 89.11615 * 9 8 3 12 12 O 1.45199 * 109.46841 * 175.00570 * 11 9 8 13 13 C 1.34892 * 116.99591 * 180.02562 * 12 11 9 14 14 O 1.21618 * 120.00111 * 359.97438 * 13 12 11 15 15 C 1.46496 * 120.00020 * 179.97438 * 13 12 11 16 16 C 1.37986 * 126.26503 * 180.15485 * 15 13 12 17 17 C 1.39799 * 106.96844 * 180.25380 * 16 15 13 18 18 C 1.50699 * 126.08068 * 179.72627 * 17 16 15 19 19 O 1.42903 * 109.47387 * 120.03893 * 18 17 16 20 20 Si 1.86296 * 109.47115 * 0.03688 * 18 17 16 21 21 C 1.35493 * 107.84360 * 359.75729 * 17 16 15 22 22 N 1.34960 * 108.98122 * 0.02562 * 21 17 16 23 23 C 1.46499 * 125.63325 * 179.97438 * 22 21 17 24 24 C 1.53775 * 113.69274 * 197.28480 * 3 2 1 25 25 H 1.09000 * 109.47203 * 302.47981 * 1 2 3 26 26 H 1.08998 * 109.47178 * 62.48333 * 1 2 3 27 27 H 1.09004 * 109.47080 * 182.47899 * 1 2 3 28 28 H 1.09008 * 113.61535 * 156.25407 * 8 3 2 29 29 H 1.09000 * 113.69261 * 25.35464 * 8 3 2 30 30 H 1.09001 * 109.46939 * 55.00288 * 11 9 8 31 31 H 1.09005 * 109.46900 * 295.00137 * 11 9 8 32 32 H 1.08001 * 126.51927 * 0.02562 * 16 15 13 33 33 H 1.09000 * 109.47214 * 240.03505 * 18 17 16 34 34 H 0.96697 * 114.00207 * 179.97438 * 19 18 17 35 35 H 1.48497 * 110.00072 * 60.00399 * 20 18 17 36 36 H 1.48507 * 109.99974 * 181.32097 * 20 18 17 37 37 H 1.07994 * 125.50698 * 180.02562 * 21 17 16 38 38 H 1.09001 * 109.47270 * 90.02714 * 23 22 21 39 39 H 1.09003 * 109.47104 * 330.02682 * 23 22 21 40 40 H 1.09003 * 109.47348 * 210.02727 * 23 22 21 41 41 H 1.09007 * 113.61295 * 334.57846 * 24 3 2 42 42 H 1.08999 * 113.61761 * 203.67590 * 24 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 1.7284 2.0812 1.2883 5 9 0.4117 2.5536 1.2696 6 9 1.9052 1.2366 2.3895 7 9 2.6105 3.1628 1.3838 8 6 1.7204 2.1088 -1.2788 9 6 2.9973 1.4845 -1.8662 10 1 3.5925 2.1814 -2.4561 11 6 2.7554 0.1548 -2.5832 12 8 3.9904 -0.2934 -3.2013 13 6 3.9482 -1.4590 -3.8790 14 8 2.9070 -2.0834 -3.9505 15 6 5.1564 -1.9726 -4.5289 16 6 5.2589 -3.1422 -5.2540 17 6 6.5855 -3.2409 -5.6837 18 6 7.1710 -4.3596 -6.5064 19 8 7.6835 -3.8319 -7.7316 20 14 5.8468 -5.6164 -6.8773 21 6 7.2516 -2.1525 -5.2282 22 7 6.3972 -1.3753 -4.5300 23 6 6.7352 -0.1084 -3.8767 24 6 3.4899 1.3230 -0.4184 25 1 -0.3633 0.5519 0.8669 26 1 -0.3633 0.4748 -0.9114 27 1 -0.3633 -1.0267 0.0445 28 1 1.7858 3.1881 -1.1407 29 1 0.8087 1.8021 -1.7915 30 1 1.9929 0.2892 -3.3505 31 1 2.4184 -0.5905 -1.8627 32 1 4.4659 -3.8490 -5.4491 33 1 7.9784 -4.8357 -5.9501 34 1 8.0769 -4.4975 -8.3124 35 1 4.7403 -4.9797 -7.6357 36 1 6.4188 -6.7406 -7.6612 37 1 8.2971 -1.9410 -5.3967 38 1 6.5776 0.7138 -4.5747 39 1 7.7801 -0.1268 -3.5669 40 1 6.0994 0.0305 -3.0023 41 1 4.0066 0.3808 -0.2355 42 1 4.0390 2.1874 -0.0451 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_10804114_17321610.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 03:00:27 Heat of formation + Delta-G solvation = -218.270222 kcal Electronic energy + Delta-G solvation = -32030.445612 eV Core-core repulsion = 26951.288104 eV Total energy + Delta-G solvation = -5079.157508 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.122 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -51.20613 -48.75530 -48.63269 -42.61470 -41.72120 -40.63504 -37.79657 -37.72729 -36.90909 -34.20011 -31.36908 -30.46283 -28.68266 -28.34402 -27.47913 -26.96052 -25.72015 -24.18632 -23.29660 -21.13299 -20.94903 -20.63289 -19.79261 -19.49330 -19.26826 -18.59961 -18.39461 -17.94069 -17.58417 -17.28731 -16.70749 -16.53693 -16.24658 -15.89128 -15.72477 -15.61341 -15.53891 -15.37464 -15.15052 -15.02087 -14.88325 -14.82079 -14.68305 -14.50504 -14.31759 -13.94912 -13.90401 -13.56901 -13.42061 -13.34450 -13.20813 -13.13244 -12.85382 -12.47374 -12.44247 -12.18630 -11.83574 -11.80091 -11.67732 -11.60345 -10.89234 -10.40834 -9.74837 -9.28946 -4.82077 0.24401 1.35682 1.43206 1.51421 1.57434 1.67426 1.80753 1.96060 2.10817 2.13054 2.49519 2.58011 2.77572 3.11574 3.25694 3.37247 3.47705 3.55018 3.67766 3.77920 4.01190 4.06681 4.09539 4.13312 4.15094 4.19666 4.20792 4.27999 4.35213 4.41051 4.46108 4.51054 4.51808 4.52821 4.62340 4.64043 4.78196 4.93342 5.08328 5.35202 5.58818 5.62049 5.86257 6.08577 6.54704 6.77639 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.010 3.990 2 O -0.332 6.332 3 C 0.039 3.961 4 C 0.437 3.563 5 F -0.181 7.181 6 F -0.173 7.173 7 F -0.175 7.175 8 C -0.143 4.143 9 C -0.100 4.100 10 H 0.107 0.893 11 C 0.079 3.921 12 O -0.359 6.359 13 C 0.541 3.459 14 O -0.495 6.495 15 C -0.045 4.045 16 C -0.087 4.087 17 C -0.172 4.172 18 C -0.038 4.038 19 O -0.540 6.540 20 Si 0.684 3.316 21 C 0.067 3.933 22 N -0.415 5.415 23 C 0.063 3.937 24 C -0.113 4.113 25 H 0.055 0.945 26 H 0.055 0.945 27 H 0.103 0.897 28 H 0.113 0.887 29 H 0.096 0.904 30 H 0.077 0.923 31 H 0.094 0.906 32 H 0.157 0.843 33 H 0.073 0.927 34 H 0.378 0.622 35 H -0.255 1.255 36 H -0.263 1.263 37 H 0.175 0.825 38 H 0.080 0.920 39 H 0.089 0.911 40 H 0.102 0.898 41 H 0.099 0.901 42 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.887 1.437 0.594 3.279 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 O -0.249 6.249 3 C -0.004 4.004 4 C 0.383 3.617 5 F -0.163 7.163 6 F -0.155 7.155 7 F -0.156 7.156 8 C -0.181 4.181 9 C -0.118 4.118 10 H 0.125 0.875 11 C 0.005 3.995 12 O -0.277 6.277 13 C 0.386 3.614 14 O -0.382 6.382 15 C -0.154 4.154 16 C -0.113 4.113 17 C -0.178 4.178 18 C -0.148 4.148 19 O -0.347 6.347 20 Si 0.585 3.415 21 C -0.071 4.071 22 N -0.089 5.089 23 C -0.078 4.078 24 C -0.150 4.150 25 H 0.073 0.927 26 H 0.074 0.926 27 H 0.122 0.878 28 H 0.132 0.868 29 H 0.114 0.886 30 H 0.095 0.905 31 H 0.112 0.888 32 H 0.174 0.826 33 H 0.090 0.910 34 H 0.225 0.775 35 H -0.179 1.179 36 H -0.188 1.188 37 H 0.192 0.808 38 H 0.099 0.901 39 H 0.108 0.892 40 H 0.120 0.880 41 H 0.117 0.883 42 H 0.136 0.864 Dipole moment (debyes) X Y Z Total from point charges 1.980 1.617 0.476 2.600 hybrid contribution 0.386 0.568 -0.479 0.837 sum 2.367 2.184 -0.004 3.221 Atomic orbital electron populations 1.23168 0.79298 1.04606 1.01530 1.88097 1.21311 1.21699 1.93812 1.24023 0.99994 0.86474 0.89920 1.21174 0.74307 0.78685 0.87583 1.93190 1.36905 1.89326 1.96833 1.93225 1.94929 1.70609 1.56713 1.93178 1.68863 1.57024 1.96580 1.23599 0.99636 1.01137 0.93694 1.22118 0.97729 0.96447 0.95539 0.87522 1.23011 0.83872 0.95511 0.97071 1.86515 1.39030 1.38425 1.63726 1.19654 0.87143 0.78707 0.75916 1.90932 1.30822 1.58067 1.58380 1.19227 0.84506 0.98555 1.13159 1.21155 0.96435 0.95455 0.98220 1.18652 0.93755 0.98851 1.06566 1.23997 1.04615 1.00164 0.86065 1.86584 1.79444 1.37937 1.30764 0.94938 0.79566 0.77622 0.89355 1.21813 0.96583 0.91782 0.96945 1.43944 1.07733 1.18201 1.39035 1.22376 1.03316 0.82770 0.99303 1.23283 0.91063 1.05734 0.94909 0.92684 0.92627 0.87830 0.86835 0.88574 0.90515 0.88777 0.82562 0.90952 0.77455 1.17868 1.18836 0.80807 0.90111 0.89224 0.87983 0.88282 0.86448 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.43 101.05 1.05 1.04 16 2 O -0.33 -0.09 8.36 -35.23 -0.29 -0.39 16 3 C 0.04 -0.04 0.85 -89.81 -0.08 -0.11 16 4 C 0.44 0.28 2.51 37.16 0.09 0.38 16 5 F -0.18 -0.19 15.24 2.25 0.03 -0.16 16 6 F -0.17 -0.43 17.09 2.25 0.04 -0.39 16 7 F -0.18 -0.09 15.82 2.25 0.04 -0.06 16 8 C -0.14 0.40 6.52 -25.92 -0.17 0.24 16 9 C -0.10 0.27 4.21 -89.80 -0.38 -0.11 16 10 H 0.11 -0.41 8.14 -51.93 -0.42 -0.84 16 11 C 0.08 -0.04 5.06 37.16 0.19 0.15 16 12 O -0.36 -0.24 7.65 -41.02 -0.31 -0.55 16 13 C 0.54 1.68 7.92 34.06 0.27 1.95 16 14 O -0.49 -2.80 16.68 -19.36 -0.32 -3.13 16 15 C -0.05 -0.11 6.88 -82.00 -0.56 -0.68 16 16 C -0.09 -0.21 9.14 -39.09 -0.36 -0.57 16 17 C -0.17 -0.27 5.44 -105.02 -0.57 -0.84 16 18 C -0.04 -0.01 2.99 36.01 0.11 0.10 16 19 O -0.54 -0.63 12.85 -35.23 -0.45 -1.09 16 20 Si 0.68 0.05 30.64 -169.99 -5.21 -5.16 16 21 C 0.07 0.03 11.25 -17.16 -0.19 -0.17 16 22 N -0.42 -0.16 3.15 -120.40 -0.38 -0.54 16 23 C 0.06 -0.18 10.56 59.85 0.63 0.45 16 24 C -0.11 0.26 6.89 -25.92 -0.18 0.08 16 25 H 0.05 -0.05 6.25 -51.93 -0.32 -0.37 16 26 H 0.06 -0.14 6.76 -51.93 -0.35 -0.49 16 27 H 0.10 -0.22 8.14 -51.93 -0.42 -0.65 16 28 H 0.11 -0.43 8.06 -51.92 -0.42 -0.85 16 29 H 0.10 -0.31 6.70 -51.93 -0.35 -0.66 16 30 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 31 H 0.09 0.07 6.12 -51.93 -0.32 -0.25 16 32 H 0.16 0.26 6.38 -52.49 -0.34 -0.07 16 33 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 34 H 0.38 -1.03 8.74 45.56 0.40 -0.63 16 35 H -0.25 -0.94 7.11 56.52 0.40 -0.54 16 36 H -0.26 -0.46 7.11 56.52 0.40 -0.06 16 37 H 0.17 -0.35 8.06 -52.49 -0.42 -0.77 16 38 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 39 H 0.09 -0.43 8.14 -51.93 -0.42 -0.85 16 40 H 0.10 -0.29 6.13 -51.93 -0.32 -0.61 16 41 H 0.10 -0.18 8.10 -51.93 -0.42 -0.60 16 42 H 0.12 -0.40 7.01 -51.93 -0.36 -0.76 16 LS Contribution 359.34 15.07 5.42 5.42 Total: 0.00 -8.29 359.34 -6.54 -14.82 By element: Atomic # 1 Polarization: -5.74 SS G_CDS: -4.95 Total: -10.69 kcal Atomic # 6 Polarization: 2.06 SS G_CDS: -0.14 Total: 1.92 kcal Atomic # 7 Polarization: -0.16 SS G_CDS: -0.38 Total: -0.54 kcal Atomic # 8 Polarization: -3.77 SS G_CDS: -1.38 Total: -5.15 kcal Atomic # 9 Polarization: -0.72 SS G_CDS: 0.11 Total: -0.61 kcal Atomic # 14 Polarization: 0.05 SS G_CDS: -5.21 Total: -5.16 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -8.29 -6.54 -14.82 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_10804114_17321610.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -203.445 kcal (2) G-P(sol) polarization free energy of solvation -8.287 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -211.733 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.537 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.825 kcal (6) G-S(sol) free energy of system = (1) + (5) -218.270 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds