Wall clock time and date at job start Sat Mar 6 2021 03:06:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.37694 * 125.63660 * 2 1 4 4 C 1.46498 * 126.26245 * 0.02562 * 3 2 1 5 5 O 1.21623 * 120.00145 * 179.71853 * 4 3 2 6 6 O 1.34893 * 119.99813 * 359.44273 * 4 3 2 7 7 C 1.45196 * 117.00151 * 180.26947 * 6 4 3 8 8 C 1.52994 * 109.47253 * 180.02562 * 7 6 4 9 9 H 1.08999 * 112.85169 * 316.19595 * 8 7 6 10 10 C 1.53785 * 113.61444 * 87.50720 * 8 7 6 11 11 C 1.53786 * 87.07958 * 139.98052 * 10 8 7 12 12 H 1.08999 * 113.61280 * 89.12154 * 11 10 8 13 13 O 1.42904 * 113.68604 * 220.00490 * 11 10 8 14 14 C 1.53778 * 87.08275 * 334.56726 * 11 10 8 15 15 C 1.37991 * 107.47630 * 179.75349 * 3 2 1 16 16 C 1.39793 * 106.96920 * 0.23696 * 15 3 2 17 17 C 1.34959 * 125.63728 * 180.17347 * 2 1 3 18 18 C 1.50700 * 125.50749 * 0.02562 * 17 2 1 19 19 O 1.42897 * 109.47151 * 330.26725 * 18 17 2 20 20 Si 1.86295 * 109.47396 * 210.26219 * 18 17 2 21 21 H 1.08998 * 109.46780 * 90.02987 * 1 2 3 22 22 H 1.08998 * 109.47393 * 210.02652 * 1 2 3 23 23 H 1.09000 * 109.47239 * 330.03338 * 1 2 3 24 24 H 1.08998 * 109.47461 * 300.00565 * 7 6 4 25 25 H 1.09010 * 109.46796 * 60.00354 * 7 6 4 26 26 H 1.08992 * 113.61234 * 254.53026 * 10 8 7 27 27 H 1.09005 * 113.61093 * 25.43069 * 10 8 7 28 28 H 0.96694 * 114.00460 * 277.53900 * 13 11 10 29 29 H 1.09000 * 113.61749 * 270.88447 * 14 11 10 30 30 H 1.09001 * 113.69148 * 139.99245 * 14 11 10 31 31 H 1.08002 * 126.51825 * 180.26871 * 15 3 2 32 32 H 1.08001 * 126.08248 * 179.97438 * 16 15 3 33 33 H 1.09001 * 109.46952 * 90.26616 * 18 17 2 34 34 H 0.96705 * 113.99941 * 299.99020 * 19 18 17 35 35 H 1.48506 * 109.99883 * 58.68443 * 20 18 17 36 36 H 1.48501 * 110.00165 * 180.02562 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2673 1.1191 0.0000 4 6 1.8121 2.5116 0.0005 5 8 2.6243 3.4168 0.0056 6 8 0.4922 2.7897 -0.0103 7 6 0.1139 4.1915 -0.0151 8 6 -1.4115 4.3080 -0.0267 9 1 -1.8836 3.6165 -0.7245 10 6 -2.0410 4.2959 1.3764 11 6 -3.0035 5.3823 0.8681 12 1 -3.9119 4.9840 0.4161 13 8 -3.2649 6.4110 1.8250 14 6 -1.9179 5.7544 -0.1555 15 6 3.5784 0.6890 0.0057 16 6 3.5494 -0.7086 0.0035 17 6 2.2513 -1.0968 -0.0033 18 6 1.7643 -2.5230 -0.0082 19 8 0.5030 -2.5978 0.6593 20 14 2.9989 -3.6039 0.8739 21 1 -0.3633 -0.0005 -1.0277 22 1 -0.3634 -0.8897 0.5142 23 1 -0.3634 0.8903 0.5133 24 1 0.5083 4.6774 0.8773 25 1 0.5224 4.6750 -0.9027 26 1 -2.5348 3.3567 1.6252 27 1 -1.3670 4.6416 2.1603 28 1 -3.9468 6.1828 2.4715 29 1 -1.2104 6.4989 0.2096 30 1 -2.3111 5.9930 -1.1437 31 1 4.4596 1.3134 0.0112 32 1 4.4088 -1.3627 0.0063 33 1 1.6518 -2.8649 -1.0370 34 1 0.5283 -2.3082 1.5816 35 1 3.1851 -3.1285 2.2684 36 1 2.5305 -5.0131 0.8754 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_10804116_11354868.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 03:06:30 Heat of formation + Delta-G solvation = -84.240131 kcal Electronic energy + Delta-G solvation = -20648.081074 eV Core-core repulsion = 17294.172711 eV Total energy + Delta-G solvation = -3353.908363 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 268.119 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -42.70913 -41.16373 -40.19611 -38.12710 -37.43106 -36.04582 -33.96801 -31.68914 -29.74398 -27.63110 -26.99236 -26.86423 -24.14923 -23.02764 -21.48031 -21.03472 -20.47423 -18.94499 -18.68031 -18.46539 -17.64071 -17.57291 -16.82078 -16.48863 -16.25406 -15.76807 -15.46498 -15.13754 -14.98834 -14.65413 -14.34611 -14.03618 -13.88469 -13.71187 -13.58653 -13.23497 -13.04344 -12.86922 -12.48242 -12.40148 -12.21121 -12.00849 -11.76386 -11.61564 -11.31050 -10.98983 -10.86292 -9.79983 -9.22412 -5.02364 0.18164 1.03452 1.47063 1.57890 1.60492 1.75376 1.98875 2.17580 2.95720 3.09020 3.30614 3.39089 3.41246 3.58264 3.77980 3.79391 3.92252 4.08262 4.14740 4.24728 4.28060 4.34244 4.41772 4.49952 4.53754 4.64087 4.64396 4.69330 4.82685 4.97690 5.00497 5.08457 5.22092 5.37899 5.61464 5.88655 6.02757 6.10815 6.60667 6.78097 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.050 3.950 2 N -0.400 5.400 3 C -0.049 4.049 4 C 0.538 3.462 5 O -0.498 6.498 6 O -0.359 6.359 7 C 0.080 3.920 8 C -0.111 4.111 9 H 0.106 0.894 10 C -0.165 4.165 11 C 0.077 3.923 12 H 0.085 0.915 13 O -0.559 6.559 14 C -0.120 4.120 15 C -0.089 4.089 16 C -0.205 4.205 17 C 0.027 3.973 18 C -0.058 4.058 19 O -0.531 6.531 20 Si 0.720 3.280 21 H 0.076 0.924 22 H 0.109 0.891 23 H 0.095 0.905 24 H 0.075 0.925 25 H 0.076 0.924 26 H 0.073 0.927 27 H 0.091 0.909 28 H 0.381 0.619 29 H 0.095 0.905 30 H 0.081 0.919 31 H 0.156 0.844 32 H 0.158 0.842 33 H 0.127 0.873 34 H 0.379 0.621 35 H -0.256 1.256 36 H -0.253 1.253 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.941 -3.255 -0.230 3.797 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 N -0.074 5.074 3 C -0.159 4.159 4 C 0.383 3.617 5 O -0.385 6.385 6 O -0.277 6.277 7 C 0.007 3.993 8 C -0.129 4.129 9 H 0.124 0.876 10 C -0.202 4.202 11 C 0.018 3.982 12 H 0.103 0.897 13 O -0.365 6.365 14 C -0.157 4.157 15 C -0.115 4.115 16 C -0.228 4.228 17 C -0.092 4.092 18 C -0.167 4.167 19 O -0.338 6.338 20 Si 0.618 3.382 21 H 0.095 0.905 22 H 0.127 0.873 23 H 0.113 0.887 24 H 0.094 0.906 25 H 0.094 0.906 26 H 0.092 0.908 27 H 0.110 0.890 28 H 0.228 0.772 29 H 0.114 0.886 30 H 0.100 0.900 31 H 0.173 0.827 32 H 0.176 0.824 33 H 0.144 0.856 34 H 0.227 0.773 35 H -0.180 1.180 36 H -0.178 1.178 Dipole moment (debyes) X Y Z Total from point charges -1.739 -3.335 -0.476 3.791 hybrid contribution -1.356 0.437 0.818 1.643 sum -3.095 -2.898 0.342 4.253 Atomic orbital electron populations 1.22674 0.75599 1.06136 1.04660 1.43831 1.07065 1.04434 1.52097 1.19478 0.90915 0.83782 1.21766 1.19755 0.80712 0.87911 0.73285 1.90929 1.54807 1.46369 1.46429 1.86578 1.25718 1.30740 1.84646 1.23100 0.94645 0.78407 1.03190 1.22373 0.92988 0.98526 0.99045 0.87619 1.23800 0.99639 0.99952 0.96836 1.23275 0.96237 0.88259 0.90452 0.89713 1.86534 1.62369 1.42383 1.45205 1.23069 0.97678 0.95629 0.99362 1.21350 0.94244 0.94772 1.01158 1.20622 0.95090 0.94992 1.12140 1.21019 0.91229 0.89248 1.07737 1.24973 0.93076 0.94450 1.04164 1.86572 1.29734 1.88344 1.29163 0.94244 0.84906 0.77357 0.81730 0.90495 0.87317 0.88661 0.90637 0.90568 0.90818 0.89004 0.77183 0.88637 0.89987 0.82683 0.82434 0.85568 0.77287 1.18015 1.17792 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.05 10.21 59.85 0.61 0.57 16 2 N -0.40 -0.44 3.15 -115.78 -0.36 -0.81 16 3 C -0.05 -0.14 6.88 -82.00 -0.56 -0.71 16 4 C 0.54 2.13 7.92 34.06 0.27 2.40 16 5 O -0.50 -3.24 16.68 -19.36 -0.32 -3.56 16 6 O -0.36 -0.69 7.66 -41.02 -0.31 -1.01 16 7 C 0.08 0.06 5.32 37.15 0.20 0.25 16 8 C -0.11 0.13 4.02 -89.81 -0.36 -0.23 16 9 H 0.11 -0.20 8.14 -51.93 -0.42 -0.62 16 10 C -0.16 0.20 7.47 -25.91 -0.19 0.01 16 11 C 0.08 -0.08 5.21 -25.92 -0.14 -0.21 16 12 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 13 O -0.56 -0.27 13.67 -35.23 -0.48 -0.75 16 14 C -0.12 0.10 7.47 -25.92 -0.19 -0.09 16 15 C -0.09 -0.17 10.66 -39.09 -0.42 -0.59 16 16 C -0.20 0.01 9.37 -39.98 -0.37 -0.36 16 17 C 0.03 0.00 6.13 -82.20 -0.50 -0.50 16 18 C -0.06 0.10 2.98 36.01 0.11 0.21 16 19 O -0.53 0.64 9.98 -35.23 -0.35 0.28 16 20 Si 0.72 -1.71 31.09 -169.99 -5.29 -6.99 16 21 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 22 H 0.11 -0.22 4.98 -51.93 -0.26 -0.48 16 23 H 0.09 -0.09 6.16 -51.93 -0.32 -0.41 16 24 H 0.08 0.09 7.84 -51.93 -0.41 -0.32 16 25 H 0.08 0.06 8.14 -51.92 -0.42 -0.36 16 26 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 27 H 0.09 -0.02 7.90 -51.93 -0.41 -0.43 16 28 H 0.38 -1.35 9.12 45.56 0.42 -0.94 16 29 H 0.10 0.00 8.10 -51.93 -0.42 -0.42 16 30 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 31 H 0.16 0.17 8.06 -52.49 -0.42 -0.25 16 32 H 0.16 -0.49 6.85 -52.49 -0.36 -0.85 16 33 H 0.13 -0.31 7.96 -51.93 -0.41 -0.73 16 34 H 0.38 -1.35 8.37 45.56 0.38 -0.97 16 35 H -0.26 -0.08 7.11 56.52 0.40 0.32 16 36 H -0.25 -0.15 7.11 56.52 0.40 0.25 16 LS Contribution 304.26 15.07 4.59 4.59 Total: 0.00 -7.94 304.26 -8.04 -15.98 By element: Atomic # 1 Polarization: -4.51 SS G_CDS: -3.95 Total: -8.46 kcal Atomic # 6 Polarization: 2.29 SS G_CDS: -1.56 Total: 0.73 kcal Atomic # 7 Polarization: -0.44 SS G_CDS: -0.36 Total: -0.81 kcal Atomic # 8 Polarization: -3.56 SS G_CDS: -1.47 Total: -5.03 kcal Atomic # 14 Polarization: -1.71 SS G_CDS: -5.29 Total: -6.99 kcal Total LS contribution 4.59 Total: 4.59 kcal Total: -7.94 -8.04 -15.98 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_10804116_11354868.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -68.259 kcal (2) G-P(sol) polarization free energy of solvation -7.939 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.199 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.041 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.981 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.240 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds