Wall clock time and date at job start Sat Mar 6 2021 02:53:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.37696 * 125.63584 * 2 1 4 4 C 1.46492 * 126.26113 * 0.06539 * 3 2 1 5 5 O 1.21622 * 119.99923 * 179.97438 * 4 3 2 6 6 O 1.34892 * 120.00227 * 359.97438 * 4 3 2 7 7 C 1.45193 * 117.00276 * 180.02562 * 6 4 3 8 8 C 1.53007 * 109.47439 * 180.02562 * 7 6 4 9 9 H 1.09003 * 112.84603 * 43.80624 * 8 7 6 10 10 C 1.53771 * 113.61670 * 175.00283 * 8 7 6 11 11 C 1.53779 * 87.08341 * 139.98228 * 10 8 7 12 12 H 1.09004 * 113.61737 * 89.11444 * 11 10 8 13 13 N 1.46499 * 113.61438 * 219.93364 * 11 10 8 14 14 C 1.34773 * 120.00230 * 204.99652 * 13 11 10 15 15 O 1.21514 * 119.99750 * 359.97438 * 14 13 11 16 16 O 1.34635 * 120.00224 * 179.97438 * 14 13 11 17 17 C 1.45203 * 117.00028 * 180.02562 * 16 14 13 18 18 C 1.52993 * 109.47117 * 60.00138 * 17 16 14 19 19 C 1.52998 * 109.47160 * 180.02562 * 17 16 14 20 20 C 1.53001 * 109.47156 * 300.00455 * 17 16 14 21 21 C 1.53775 * 113.61131 * 272.50044 * 8 7 6 22 22 C 1.37991 * 107.47796 * 180.02562 * 3 2 1 23 23 C 1.39799 * 106.96517 * 359.76767 * 22 3 2 24 24 C 1.34964 * 125.63531 * 180.02562 * 2 1 3 25 25 C 1.50699 * 125.50892 * 359.93597 * 24 2 1 26 26 O 1.42901 * 109.46830 * 330.00346 * 25 24 2 27 27 Si 1.86298 * 109.46950 * 210.00784 * 25 24 2 28 28 H 1.08997 * 109.46965 * 269.94882 * 1 2 3 29 29 H 1.08994 * 109.47611 * 29.95487 * 1 2 3 30 30 H 1.09006 * 109.46932 * 149.95825 * 1 2 3 31 31 H 1.09006 * 109.47625 * 300.00211 * 7 6 4 32 32 H 1.08999 * 109.47026 * 60.00408 * 7 6 4 33 33 H 1.09000 * 113.61631 * 254.53060 * 10 8 7 34 34 H 1.09000 * 113.61645 * 25.42797 * 10 8 7 35 35 H 0.97002 * 120.00215 * 24.99977 * 13 11 10 36 36 H 1.09005 * 109.47208 * 59.99925 * 18 17 16 37 37 H 1.08996 * 109.47505 * 179.97438 * 18 17 16 38 38 H 1.09001 * 109.47440 * 299.99973 * 18 17 16 39 39 H 1.09003 * 109.47036 * 60.00126 * 19 17 16 40 40 H 1.09004 * 109.47298 * 180.02562 * 19 17 16 41 41 H 1.09001 * 109.46967 * 300.00410 * 19 17 16 42 42 H 1.09001 * 109.47438 * 59.99624 * 20 17 16 43 43 H 1.08999 * 109.47241 * 180.02562 * 20 17 16 44 44 H 1.09004 * 109.46609 * 299.99771 * 20 17 16 45 45 H 1.08991 * 113.61869 * 334.56542 * 21 8 7 46 46 H 1.09007 * 113.61608 * 105.46844 * 21 8 7 47 47 H 1.07994 * 126.52009 * 180.02562 * 22 3 2 48 48 H 1.08007 * 126.07743 * 180.26603 * 23 22 3 49 49 H 1.08991 * 109.47351 * 90.00494 * 25 24 2 50 50 H 0.96708 * 114.00246 * 299.99864 * 26 25 24 51 51 H 1.48506 * 109.99834 * 180.02562 * 27 25 24 52 52 H 1.48502 * 110.00011 * 301.31529 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2673 1.1191 0.0000 4 6 1.8121 2.5115 0.0013 5 8 2.6243 3.4168 0.0017 6 8 0.4921 2.7896 0.0022 7 6 0.1138 4.1914 0.0030 8 6 -1.4118 4.3080 0.0046 9 1 -1.8883 3.6173 0.7002 10 6 -1.9189 5.7544 0.1282 11 6 -2.9980 5.3810 -0.9019 12 1 -3.9092 4.9832 -0.4551 13 7 -3.2597 6.4344 -1.8858 14 6 -4.4545 6.4952 -2.5062 15 8 -5.3147 5.6761 -2.2498 16 8 -4.6952 7.4637 -3.4100 17 6 -6.0043 7.4683 -4.0384 18 6 -7.0840 7.6290 -2.9664 19 6 -6.0906 8.6317 -5.0283 20 6 -6.2173 6.1488 -4.7830 21 6 -2.0321 4.2940 -1.4025 22 6 3.5785 0.6891 -0.0006 23 6 3.5494 -0.7086 0.0045 24 6 2.2513 -1.0969 -0.0005 25 6 1.7643 -2.5230 0.0002 26 8 0.5068 -2.5965 0.6750 27 14 3.0038 -3.6020 0.8778 28 1 -0.3633 -0.0009 1.0276 29 1 -0.3634 0.8903 -0.5131 30 1 -0.3633 -0.8897 -0.5145 31 1 0.5158 4.6759 0.8929 32 1 0.5146 4.6764 -0.8871 33 1 -2.3198 5.9939 1.1131 34 1 -1.2091 6.4985 -0.2332 35 1 -2.5729 7.0880 -2.0908 36 1 -6.9322 8.5691 -2.4359 37 1 -8.0666 7.6330 -3.4381 38 1 -7.0223 6.7999 -2.2614 39 1 -5.3214 8.5168 -5.7920 40 1 -7.0735 8.6355 -5.4997 41 1 -5.9387 9.5719 -4.4982 42 1 -6.1556 5.3197 -4.0780 43 1 -7.1998 6.1525 -5.2550 44 1 -5.4480 6.0344 -5.5467 45 1 -1.3532 4.6387 -2.1824 46 1 -2.5244 3.3544 -1.6534 47 1 4.4596 1.3135 -0.0004 48 1 4.4089 -1.3626 0.0095 49 1 1.6460 -2.8671 -1.0271 50 1 0.5372 -2.3049 1.5965 51 1 2.5354 -5.0113 0.8848 52 1 4.3242 -3.5096 0.2046 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_10804116_15734238.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 02:53:22 Heat of formation + Delta-G solvation = -121.214656 kcal Electronic energy + Delta-G solvation = -33382.101601 eV Core-core repulsion = 28736.567564 eV Total energy + Delta-G solvation = -4645.534037 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.192 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -42.70644 -41.84043 -41.12291 -40.21984 -38.01361 -37.85460 -37.25984 -35.31157 -34.24745 -33.94500 -31.68199 -29.77915 -28.32926 -28.29051 -27.58746 -27.05210 -26.93360 -24.88111 -23.56992 -22.40231 -21.51391 -21.40526 -20.88371 -20.43883 -19.09380 -18.92825 -18.41152 -18.09524 -17.59325 -17.45649 -17.06819 -16.82064 -16.60768 -16.38180 -15.94511 -15.60255 -15.47144 -15.33139 -14.96542 -14.90190 -14.65684 -14.46887 -14.43530 -14.19891 -13.73703 -13.71511 -13.67042 -13.42808 -13.35018 -13.29415 -13.08845 -12.93021 -12.84581 -12.82837 -12.51826 -12.42418 -12.30371 -12.22975 -12.09676 -12.02223 -11.90670 -11.57455 -11.37857 -11.29741 -10.96340 -10.84458 -10.17622 -9.81399 -9.22756 -5.07433 0.17788 1.05071 1.17713 1.43701 1.56777 1.61878 1.78892 1.86820 1.98435 2.16291 3.10258 3.12498 3.21670 3.26142 3.41248 3.54227 3.58968 3.76937 3.77914 3.83216 3.90615 3.97092 4.03718 4.15004 4.22343 4.25105 4.32623 4.38439 4.45814 4.49282 4.50371 4.54347 4.56233 4.62817 4.67918 4.72772 4.77951 4.78346 4.84993 4.87041 4.92868 4.99515 5.02375 5.08412 5.11073 5.30286 5.36025 5.36159 5.47240 5.59950 5.62313 5.88727 6.04153 6.28429 6.40582 6.76392 7.41884 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.398 5.398 3 C -0.049 4.049 4 C 0.539 3.461 5 O -0.499 6.499 6 O -0.358 6.358 7 C 0.080 3.920 8 C -0.108 4.108 9 H 0.110 0.890 10 C -0.136 4.136 11 C 0.142 3.858 12 H 0.123 0.877 13 N -0.702 5.702 14 C 0.651 3.349 15 O -0.566 6.566 16 O -0.365 6.365 17 C 0.136 3.864 18 C -0.184 4.184 19 C -0.142 4.142 20 C -0.184 4.184 21 C -0.148 4.148 22 C -0.088 4.088 23 C -0.212 4.212 24 C 0.031 3.969 25 C -0.052 4.052 26 O -0.543 6.543 27 Si 0.723 3.277 28 H 0.080 0.920 29 H 0.095 0.905 30 H 0.098 0.902 31 H 0.076 0.924 32 H 0.074 0.926 33 H 0.087 0.913 34 H 0.094 0.906 35 H 0.407 0.593 36 H 0.060 0.940 37 H 0.072 0.928 38 H 0.087 0.913 39 H 0.067 0.933 40 H 0.082 0.918 41 H 0.067 0.933 42 H 0.087 0.913 43 H 0.072 0.928 44 H 0.059 0.941 45 H 0.089 0.911 46 H 0.080 0.920 47 H 0.154 0.846 48 H 0.152 0.848 49 H 0.122 0.878 50 H 0.381 0.619 51 H -0.252 1.252 52 H -0.251 1.251 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.775 -0.088 2.183 2.318 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 N -0.073 5.073 3 C -0.159 4.159 4 C 0.385 3.615 5 O -0.386 6.386 6 O -0.275 6.275 7 C 0.006 3.994 8 C -0.127 4.127 9 H 0.128 0.872 10 C -0.174 4.174 11 C 0.038 3.962 12 H 0.141 0.859 13 N -0.360 5.360 14 C 0.404 3.596 15 O -0.455 6.455 16 O -0.280 6.280 17 C 0.100 3.900 18 C -0.241 4.241 19 C -0.199 4.199 20 C -0.241 4.241 21 C -0.187 4.187 22 C -0.114 4.114 23 C -0.236 4.236 24 C -0.089 4.089 25 C -0.162 4.162 26 O -0.348 6.348 27 Si 0.622 3.378 28 H 0.098 0.902 29 H 0.113 0.887 30 H 0.117 0.883 31 H 0.095 0.905 32 H 0.093 0.907 33 H 0.105 0.895 34 H 0.112 0.888 35 H 0.242 0.758 36 H 0.079 0.921 37 H 0.091 0.909 38 H 0.106 0.894 39 H 0.086 0.914 40 H 0.101 0.899 41 H 0.086 0.914 42 H 0.106 0.894 43 H 0.091 0.909 44 H 0.078 0.922 45 H 0.107 0.893 46 H 0.098 0.902 47 H 0.172 0.828 48 H 0.169 0.831 49 H 0.139 0.861 50 H 0.229 0.771 51 H -0.177 1.177 52 H -0.175 1.175 Dipole moment (debyes) X Y Z Total from point charges -1.143 -0.985 1.591 2.193 hybrid contribution 0.054 0.861 -0.744 1.139 sum -1.089 -0.123 0.848 1.385 Atomic orbital electron populations 1.22418 0.75333 1.05515 1.04363 1.43833 1.07129 1.04363 1.51928 1.19430 0.90843 0.83780 1.21861 1.19731 0.80689 0.87875 0.73226 1.90927 1.54825 1.46370 1.46514 1.86585 1.25681 1.30623 1.84652 1.23093 0.94565 0.78571 1.03124 1.22388 0.92986 0.98224 0.99093 0.87217 1.23397 0.97612 0.96036 1.00335 1.22499 0.98267 0.87203 0.88268 0.85925 1.44748 1.13870 1.33945 1.43481 1.18168 0.83098 0.80022 0.78292 1.90914 1.45058 1.42506 1.67035 1.86311 1.38495 1.50358 1.52834 1.22119 0.78542 0.97031 0.92311 1.22519 0.98149 1.03757 0.99674 1.21880 1.03190 0.96737 0.98109 1.22521 1.02603 0.97751 1.01235 1.23642 0.98489 1.00092 0.96497 1.21332 0.94279 0.94697 1.01099 1.20727 0.95262 0.95199 1.12444 1.21073 0.91072 0.89366 1.07376 1.25006 0.94224 0.94412 1.02550 1.86498 1.29888 1.89132 1.29284 0.93991 0.76411 0.77726 0.89683 0.90183 0.88656 0.88337 0.90522 0.90727 0.89472 0.88800 0.75795 0.92118 0.90925 0.89436 0.91402 0.89923 0.91390 0.89427 0.90930 0.92151 0.89281 0.90175 0.82790 0.83090 0.86111 0.77133 1.17676 1.17540 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.10 9.33 59.85 0.56 0.46 16 2 N -0.40 -0.24 3.15 -115.78 -0.36 -0.61 16 3 C -0.05 -0.12 6.88 -82.00 -0.56 -0.68 16 4 C 0.54 1.69 7.92 34.06 0.27 1.96 16 5 O -0.50 -2.83 16.68 -19.36 -0.32 -3.15 16 6 O -0.36 -0.31 7.65 -41.02 -0.31 -0.62 16 7 C 0.08 -0.07 5.31 37.16 0.20 0.13 16 8 C -0.11 0.29 4.02 -89.81 -0.36 -0.07 16 9 H 0.11 -0.34 8.14 -51.93 -0.42 -0.76 16 10 C -0.14 0.46 7.39 -25.92 -0.19 0.27 16 11 C 0.14 -0.21 4.24 -67.12 -0.28 -0.50 16 12 H 0.12 -0.04 7.46 -51.93 -0.39 -0.42 16 13 N -0.70 0.29 5.36 -57.93 -0.31 -0.02 16 14 C 0.65 1.71 8.06 54.05 0.44 2.14 16 15 O -0.57 -2.75 11.48 -19.28 -0.22 -2.98 16 16 O -0.37 -0.88 9.94 -40.31 -0.40 -1.28 16 17 C 0.14 0.18 1.13 -90.62 -0.10 0.08 16 18 C -0.18 -0.24 8.37 37.15 0.31 0.07 16 19 C -0.14 0.09 8.85 37.16 0.33 0.42 16 20 C -0.18 -0.26 8.37 37.16 0.31 0.06 16 21 C -0.15 0.28 7.43 -25.92 -0.19 0.08 16 22 C -0.09 -0.17 10.66 -39.09 -0.42 -0.59 16 23 C -0.21 -0.11 9.37 -39.98 -0.37 -0.49 16 24 C 0.03 0.00 6.13 -82.20 -0.50 -0.50 16 25 C -0.05 0.08 2.88 36.01 0.10 0.19 16 26 O -0.54 1.09 10.35 -35.23 -0.36 0.72 16 27 Si 0.72 -1.72 31.27 -169.99 -5.32 -7.04 16 28 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 29 H 0.09 -0.12 6.15 -51.93 -0.32 -0.43 16 30 H 0.10 -0.16 6.78 -51.93 -0.35 -0.51 16 31 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 32 H 0.07 -0.05 7.84 -51.93 -0.41 -0.45 16 33 H 0.09 -0.33 8.14 -51.93 -0.42 -0.75 16 34 H 0.09 -0.38 8.08 -51.93 -0.42 -0.80 16 35 H 0.41 -0.95 8.84 -40.82 -0.36 -1.31 16 36 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 37 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 38 H 0.09 0.29 5.88 -51.93 -0.31 -0.02 16 39 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 40 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 41 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 42 H 0.09 0.30 5.88 -51.93 -0.31 0.00 16 43 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 44 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 45 H 0.09 -0.15 7.90 -51.93 -0.41 -0.56 16 46 H 0.08 -0.09 8.14 -51.92 -0.42 -0.52 16 47 H 0.15 0.19 8.06 -52.49 -0.42 -0.24 16 48 H 0.15 -0.14 6.61 -52.48 -0.35 -0.48 16 49 H 0.12 -0.16 7.96 -51.93 -0.41 -0.57 16 50 H 0.38 -2.02 8.70 45.56 0.40 -1.62 16 51 H -0.25 -0.16 7.11 56.52 0.40 0.25 16 52 H -0.25 0.06 6.76 56.52 0.38 0.44 16 LS Contribution 419.92 15.07 6.33 6.33 Total: 0.00 -8.50 419.92 -10.11 -18.61 By element: Atomic # 1 Polarization: -4.65 SS G_CDS: -8.34 Total: -12.99 kcal Atomic # 6 Polarization: 3.50 SS G_CDS: -0.48 Total: 3.02 kcal Atomic # 7 Polarization: 0.05 SS G_CDS: -0.68 Total: -0.63 kcal Atomic # 8 Polarization: -5.68 SS G_CDS: -1.62 Total: -7.31 kcal Atomic # 14 Polarization: -1.72 SS G_CDS: -5.32 Total: -7.04 kcal Total LS contribution 6.33 Total: 6.33 kcal Total: -8.50 -10.11 -18.61 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_10804116_15734238.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -102.606 kcal (2) G-P(sol) polarization free energy of solvation -8.502 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.108 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.106 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.608 kcal (6) G-S(sol) free energy of system = (1) + (5) -121.215 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds