Wall clock time and date at job start Sat Mar 6 2021 02:53:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.37696 * 125.63584 * 2 1 4 4 C 1.46492 * 126.26113 * 0.06539 * 3 2 1 5 5 O 1.21622 * 119.99923 * 179.97438 * 4 3 2 6 6 O 1.34892 * 120.00227 * 359.97438 * 4 3 2 7 7 C 1.45193 * 117.00276 * 180.02562 * 6 4 3 8 8 C 1.53007 * 109.47439 * 180.02562 * 7 6 4 9 9 H 1.09003 * 112.84603 * 43.80624 * 8 7 6 10 10 C 1.53771 * 113.61670 * 175.00283 * 8 7 6 11 11 C 1.53779 * 87.08341 * 139.98228 * 10 8 7 12 12 H 1.09004 * 113.61737 * 89.11444 * 11 10 8 13 13 N 1.46499 * 113.61438 * 219.93364 * 11 10 8 14 14 C 1.34773 * 120.00230 * 204.99652 * 13 11 10 15 15 O 1.21514 * 119.99750 * 359.97438 * 14 13 11 16 16 O 1.34635 * 120.00224 * 179.97438 * 14 13 11 17 17 C 1.45203 * 117.00028 * 180.02562 * 16 14 13 18 18 C 1.52993 * 109.47117 * 60.00138 * 17 16 14 19 19 C 1.52998 * 109.47160 * 180.02562 * 17 16 14 20 20 C 1.53001 * 109.47156 * 300.00455 * 17 16 14 21 21 C 1.53775 * 113.61131 * 272.50044 * 8 7 6 22 22 C 1.37991 * 107.47796 * 180.02562 * 3 2 1 23 23 C 1.39799 * 106.96517 * 359.76767 * 22 3 2 24 24 C 1.34964 * 125.63531 * 180.02562 * 2 1 3 25 25 C 1.50699 * 125.50892 * 359.93597 * 24 2 1 26 26 O 1.42901 * 109.46830 * 330.00346 * 25 24 2 27 27 Si 1.86298 * 109.46950 * 210.00784 * 25 24 2 28 28 H 1.08997 * 109.46965 * 269.94882 * 1 2 3 29 29 H 1.08994 * 109.47611 * 29.95487 * 1 2 3 30 30 H 1.09006 * 109.46932 * 149.95825 * 1 2 3 31 31 H 1.09006 * 109.47625 * 300.00211 * 7 6 4 32 32 H 1.08999 * 109.47026 * 60.00408 * 7 6 4 33 33 H 1.09000 * 113.61631 * 254.53060 * 10 8 7 34 34 H 1.09000 * 113.61645 * 25.42797 * 10 8 7 35 35 H 0.97002 * 120.00215 * 24.99977 * 13 11 10 36 36 H 1.09005 * 109.47208 * 59.99925 * 18 17 16 37 37 H 1.08996 * 109.47505 * 179.97438 * 18 17 16 38 38 H 1.09001 * 109.47440 * 299.99973 * 18 17 16 39 39 H 1.09003 * 109.47036 * 60.00126 * 19 17 16 40 40 H 1.09004 * 109.47298 * 180.02562 * 19 17 16 41 41 H 1.09001 * 109.46967 * 300.00410 * 19 17 16 42 42 H 1.09001 * 109.47438 * 59.99624 * 20 17 16 43 43 H 1.08999 * 109.47241 * 180.02562 * 20 17 16 44 44 H 1.09004 * 109.46609 * 299.99771 * 20 17 16 45 45 H 1.08991 * 113.61869 * 334.56542 * 21 8 7 46 46 H 1.09007 * 113.61608 * 105.46844 * 21 8 7 47 47 H 1.07994 * 126.52009 * 180.02562 * 22 3 2 48 48 H 1.08007 * 126.07743 * 180.26603 * 23 22 3 49 49 H 1.08991 * 109.47351 * 90.00494 * 25 24 2 50 50 H 0.96708 * 114.00246 * 299.99864 * 26 25 24 51 51 H 1.48506 * 109.99834 * 180.02562 * 27 25 24 52 52 H 1.48502 * 110.00011 * 301.31529 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2673 1.1191 0.0000 4 6 1.8121 2.5115 0.0013 5 8 2.6243 3.4168 0.0017 6 8 0.4921 2.7896 0.0022 7 6 0.1138 4.1914 0.0030 8 6 -1.4118 4.3080 0.0046 9 1 -1.8883 3.6173 0.7002 10 6 -1.9189 5.7544 0.1282 11 6 -2.9980 5.3810 -0.9019 12 1 -3.9092 4.9832 -0.4551 13 7 -3.2597 6.4344 -1.8858 14 6 -4.4545 6.4952 -2.5062 15 8 -5.3147 5.6761 -2.2498 16 8 -4.6952 7.4637 -3.4100 17 6 -6.0043 7.4683 -4.0384 18 6 -7.0840 7.6290 -2.9664 19 6 -6.0906 8.6317 -5.0283 20 6 -6.2173 6.1488 -4.7830 21 6 -2.0321 4.2940 -1.4025 22 6 3.5785 0.6891 -0.0006 23 6 3.5494 -0.7086 0.0045 24 6 2.2513 -1.0969 -0.0005 25 6 1.7643 -2.5230 0.0002 26 8 0.5068 -2.5965 0.6750 27 14 3.0038 -3.6020 0.8778 28 1 -0.3633 -0.0009 1.0276 29 1 -0.3634 0.8903 -0.5131 30 1 -0.3633 -0.8897 -0.5145 31 1 0.5158 4.6759 0.8929 32 1 0.5146 4.6764 -0.8871 33 1 -2.3198 5.9939 1.1131 34 1 -1.2091 6.4985 -0.2332 35 1 -2.5729 7.0880 -2.0908 36 1 -6.9322 8.5691 -2.4359 37 1 -8.0666 7.6330 -3.4381 38 1 -7.0223 6.7999 -2.2614 39 1 -5.3214 8.5168 -5.7920 40 1 -7.0735 8.6355 -5.4997 41 1 -5.9387 9.5719 -4.4982 42 1 -6.1556 5.3197 -4.0780 43 1 -7.1998 6.1525 -5.2550 44 1 -5.4480 6.0344 -5.5467 45 1 -1.3532 4.6387 -2.1824 46 1 -2.5244 3.3544 -1.6534 47 1 4.4596 1.3135 -0.0004 48 1 4.4089 -1.3626 0.0095 49 1 1.6460 -2.8671 -1.0271 50 1 0.5372 -2.3049 1.5965 51 1 2.5354 -5.0113 0.8848 52 1 4.3242 -3.5096 0.2046 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_10804116_15734238.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 02:53:21 Heat of formation + Delta-G solvation = -118.416102 kcal Electronic energy + Delta-G solvation = -33381.980247 eV Core-core repulsion = 28736.567564 eV Total energy + Delta-G solvation = -4645.412682 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.192 amu Computer time = 1.44 seconds Orbital eigenvalues (eV) -42.75596 -41.93933 -41.22058 -40.21800 -38.09970 -37.76864 -37.41031 -35.43222 -34.28519 -33.94510 -31.71481 -29.75228 -28.39688 -28.33105 -27.55274 -27.02816 -26.77716 -24.90215 -23.64429 -22.41460 -21.54990 -21.43123 -20.92488 -20.41992 -19.18013 -18.95762 -18.42100 -18.11118 -17.68230 -17.55642 -17.20730 -16.77365 -16.60716 -16.29177 -15.93083 -15.57756 -15.51566 -15.39857 -14.96447 -14.88407 -14.70330 -14.51490 -14.46113 -14.23295 -13.72375 -13.66365 -13.52845 -13.39634 -13.29938 -13.25878 -13.09134 -12.95071 -12.90011 -12.89466 -12.54777 -12.46487 -12.30929 -12.23177 -12.12591 -11.99738 -11.88104 -11.66005 -11.42393 -11.31263 -11.13334 -10.73424 -10.18891 -9.84958 -9.28838 -4.90088 0.05192 1.12296 1.15060 1.39742 1.55357 1.69813 1.70584 1.85634 2.01719 2.07287 3.10851 3.30586 3.34015 3.39360 3.47108 3.60193 3.70515 3.71443 3.77335 3.81335 3.91583 3.94323 4.13674 4.22556 4.24820 4.36372 4.42526 4.46039 4.48069 4.50970 4.58403 4.59813 4.66791 4.73504 4.73642 4.76023 4.80886 4.83612 4.84675 4.91679 4.93013 4.97608 5.02951 5.08037 5.15958 5.23989 5.24219 5.29906 5.46804 5.56587 5.57879 5.81975 6.05501 6.36400 6.59016 6.61899 7.30570 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.063 3.937 2 N -0.397 5.397 3 C -0.074 4.074 4 C 0.541 3.459 5 O -0.533 6.533 6 O -0.352 6.352 7 C 0.077 3.923 8 C -0.096 4.096 9 H 0.117 0.883 10 C -0.122 4.122 11 C 0.136 3.864 12 H 0.110 0.890 13 N -0.691 5.691 14 C 0.643 3.357 15 O -0.594 6.594 16 O -0.371 6.371 17 C 0.127 3.873 18 C -0.179 4.179 19 C -0.138 4.138 20 C -0.180 4.180 21 C -0.147 4.147 22 C -0.100 4.100 23 C -0.219 4.219 24 C 0.038 3.962 25 C -0.052 4.052 26 O -0.550 6.550 27 Si 0.803 3.197 28 H 0.097 0.903 29 H 0.091 0.909 30 H 0.102 0.898 31 H 0.078 0.922 32 H 0.071 0.929 33 H 0.097 0.903 34 H 0.105 0.895 35 H 0.417 0.583 36 H 0.062 0.938 37 H 0.086 0.914 38 H 0.064 0.936 39 H 0.068 0.932 40 H 0.098 0.902 41 H 0.069 0.931 42 H 0.064 0.936 43 H 0.087 0.913 44 H 0.060 0.940 45 H 0.088 0.912 46 H 0.072 0.928 47 H 0.153 0.847 48 H 0.164 0.836 49 H 0.120 0.880 50 H 0.396 0.604 51 H -0.292 1.292 52 H -0.279 1.279 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.178 0.029 2.471 2.738 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 N -0.071 5.071 3 C -0.183 4.183 4 C 0.388 3.612 5 O -0.424 6.424 6 O -0.269 6.269 7 C 0.003 3.997 8 C -0.115 4.115 9 H 0.136 0.864 10 C -0.160 4.160 11 C 0.033 3.967 12 H 0.128 0.872 13 N -0.350 5.350 14 C 0.397 3.603 15 O -0.485 6.485 16 O -0.285 6.285 17 C 0.090 3.910 18 C -0.237 4.237 19 C -0.195 4.195 20 C -0.237 4.237 21 C -0.186 4.186 22 C -0.126 4.126 23 C -0.242 4.242 24 C -0.082 4.082 25 C -0.162 4.162 26 O -0.357 6.357 27 Si 0.706 3.294 28 H 0.116 0.884 29 H 0.109 0.891 30 H 0.120 0.880 31 H 0.097 0.903 32 H 0.090 0.910 33 H 0.116 0.884 34 H 0.124 0.876 35 H 0.254 0.746 36 H 0.081 0.919 37 H 0.105 0.895 38 H 0.083 0.917 39 H 0.087 0.913 40 H 0.117 0.883 41 H 0.088 0.912 42 H 0.083 0.917 43 H 0.105 0.895 44 H 0.079 0.921 45 H 0.107 0.893 46 H 0.090 0.910 47 H 0.171 0.829 48 H 0.181 0.819 49 H 0.138 0.862 50 H 0.247 0.753 51 H -0.219 1.219 52 H -0.205 1.205 Dipole moment (debyes) X Y Z Total from point charges -1.561 -0.837 1.896 2.595 hybrid contribution 0.147 0.760 -0.857 1.155 sum -1.414 -0.077 1.039 1.757 Atomic orbital electron populations 1.22538 0.74174 1.05450 1.05497 1.43983 1.07836 1.03960 1.51321 1.19472 0.91410 0.84023 1.23434 1.19887 0.80972 0.87925 0.72406 1.90899 1.55681 1.47329 1.48457 1.86592 1.24496 1.31680 1.84137 1.23255 0.95593 0.77717 1.03110 1.22324 0.91606 0.99008 0.98595 0.86446 1.23361 0.96717 0.95739 1.00187 1.22555 0.98243 0.87301 0.88649 0.87207 1.44788 1.13149 1.34144 1.42916 1.18432 0.83613 0.79864 0.78429 1.90900 1.46124 1.43502 1.67924 1.86315 1.39143 1.50262 1.52819 1.22352 0.78189 0.97759 0.92653 1.22467 0.99020 1.02803 0.99371 1.21894 1.04207 0.95811 0.97590 1.22471 1.03491 0.97060 1.00672 1.23621 0.98332 0.99580 0.97054 1.21515 0.94362 0.95530 1.01221 1.20913 0.96054 0.94756 1.12516 1.21368 0.90927 0.89901 1.06029 1.25121 0.94805 0.93329 1.02913 1.86476 1.29503 1.89133 1.30638 0.93006 0.73580 0.74513 0.88289 0.88439 0.89075 0.87981 0.90345 0.91018 0.88427 0.87647 0.74611 0.91913 0.89478 0.91709 0.91279 0.88306 0.91153 0.91739 0.89463 0.92098 0.89344 0.90959 0.82883 0.81854 0.86234 0.75334 1.21915 1.20508 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.22 9.33 127.77 1.19 0.97 16 2 N -0.40 -0.44 3.15 -520.21 -1.64 -2.08 16 3 C -0.07 -0.41 6.88 40.32 0.28 -0.13 16 4 C 0.54 3.94 7.92 69.97 0.55 4.49 16 5 O -0.53 -6.84 16.68 19.44 0.32 -6.51 16 6 O -0.35 -0.76 7.65 -58.07 -0.44 -1.21 16 7 C 0.08 -0.12 5.31 71.98 0.38 0.26 16 8 C -0.10 0.55 4.02 -10.27 -0.04 0.51 16 9 H 0.12 -0.80 8.14 -2.39 -0.02 -0.82 16 10 C -0.12 0.90 7.39 31.12 0.23 1.13 16 11 C 0.14 -0.36 4.24 45.52 0.19 -0.17 16 12 H 0.11 0.04 7.46 -2.39 -0.02 0.02 16 13 N -0.69 0.25 5.36 -567.61 -3.04 -2.79 16 14 C 0.64 4.05 8.06 129.79 1.05 5.10 16 15 O -0.59 -6.79 11.48 19.80 0.23 -6.57 16 16 O -0.37 -2.02 9.94 -55.45 -0.55 -2.57 16 17 C 0.13 0.38 1.13 -10.80 -0.01 0.37 16 18 C -0.18 -0.55 8.37 71.98 0.60 0.06 16 19 C -0.14 0.26 8.85 71.98 0.64 0.90 16 20 C -0.18 -0.61 8.37 71.98 0.60 0.00 16 21 C -0.15 0.49 7.43 31.12 0.23 0.72 16 22 C -0.10 -0.47 10.66 22.59 0.24 -0.23 16 23 C -0.22 -0.24 9.37 22.01 0.21 -0.03 16 24 C 0.04 -0.02 6.13 41.44 0.25 0.24 16 25 C -0.05 0.21 2.88 71.24 0.20 0.41 16 26 O -0.55 2.87 10.35 -148.98 -1.54 1.33 16 27 Si 0.80 -4.18 31.27 68.60 2.15 -2.03 16 28 H 0.10 -0.68 8.14 -2.39 -0.02 -0.70 16 29 H 0.09 -0.23 6.15 -2.39 -0.01 -0.24 16 30 H 0.10 -0.40 6.78 -2.38 -0.02 -0.42 16 31 H 0.08 -0.13 8.14 -2.38 -0.02 -0.14 16 32 H 0.07 -0.06 7.84 -2.39 -0.02 -0.07 16 33 H 0.10 -0.85 8.14 -2.39 -0.02 -0.87 16 34 H 0.11 -0.98 8.08 -2.39 -0.02 -1.00 16 35 H 0.42 -1.96 8.84 -92.71 -0.82 -2.78 16 36 H 0.06 0.15 8.14 -2.38 -0.02 0.13 16 37 H 0.09 -0.03 8.14 -2.39 -0.02 -0.05 16 38 H 0.06 0.53 5.88 -2.39 -0.01 0.51 16 39 H 0.07 -0.14 8.14 -2.39 -0.02 -0.15 16 40 H 0.10 -0.51 8.14 -2.38 -0.02 -0.53 16 41 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 42 H 0.06 0.55 5.88 -2.39 -0.01 0.54 16 43 H 0.09 -0.01 8.14 -2.39 -0.02 -0.03 16 44 H 0.06 0.18 8.14 -2.38 -0.02 0.16 16 45 H 0.09 -0.26 7.90 -2.39 -0.02 -0.28 16 46 H 0.07 -0.11 8.14 -2.38 -0.02 -0.13 16 47 H 0.15 0.60 8.06 -2.91 -0.02 0.58 16 48 H 0.16 -0.33 6.61 -2.91 -0.02 -0.35 16 49 H 0.12 -0.40 7.96 -2.39 -0.02 -0.42 16 50 H 0.40 -4.83 8.70 -74.05 -0.64 -5.48 16 51 H -0.29 -0.46 7.11 99.48 0.71 0.25 16 52 H -0.28 0.16 6.76 99.48 0.67 0.83 16 Total: 0.00 -21.25 419.92 1.77 -19.48 By element: Atomic # 1 Polarization: -11.11 SS G_CDS: -0.51 Total: -11.63 kcal Atomic # 6 Polarization: 7.78 SS G_CDS: 6.80 Total: 14.58 kcal Atomic # 7 Polarization: -0.19 SS G_CDS: -4.68 Total: -4.87 kcal Atomic # 8 Polarization: -13.55 SS G_CDS: -1.99 Total: -15.53 kcal Atomic # 14 Polarization: -4.18 SS G_CDS: 2.15 Total: -2.03 kcal Total: -21.25 1.77 -19.48 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_10804116_15734238.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.933 kcal (2) G-P(sol) polarization free energy of solvation -21.250 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.183 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.767 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.483 kcal (6) G-S(sol) free energy of system = (1) + (5) -118.416 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.44 seconds