Wall clock time and date at job start Sat Mar 6 2021 00:24:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.37701 * 125.64040 * 2 1 4 4 C 1.46494 * 126.26105 * 359.93038 * 3 2 1 5 5 O 1.21623 * 120.00230 * 179.97438 * 4 3 2 6 6 O 1.34898 * 119.99792 * 359.97438 * 4 3 2 7 7 C 1.45200 * 117.00017 * 179.97438 * 6 4 3 8 8 C 1.53001 * 109.47111 * 179.97438 * 7 6 4 9 9 H 1.08992 * 109.47514 * 305.00709 * 8 7 6 10 10 C 1.53002 * 109.46637 * 65.00579 * 8 7 6 11 11 C 1.52997 * 109.46817 * 179.97438 * 10 8 7 12 12 C 1.53005 * 109.47452 * 300.00239 * 11 10 8 13 13 H 1.09002 * 109.46935 * 300.00125 * 12 11 10 14 14 O 1.42900 * 109.47304 * 180.02562 * 12 11 10 15 15 C 1.52999 * 109.47159 * 59.99536 * 12 11 10 16 16 C 1.52997 * 109.47317 * 300.00546 * 15 12 11 17 17 C 1.37992 * 107.47603 * 180.19200 * 3 2 1 18 18 C 1.39797 * 106.97091 * 359.64295 * 17 3 2 19 19 C 1.34965 * 125.63704 * 179.97438 * 2 1 3 20 20 C 1.50707 * 125.50148 * 0.02562 * 19 2 1 21 21 O 1.42896 * 109.47254 * 329.99325 * 20 19 2 22 22 Si 1.86304 * 109.46504 * 209.99467 * 20 19 2 23 23 H 1.08996 * 109.47228 * 90.02137 * 1 2 3 24 24 H 1.08992 * 109.47173 * 210.02684 * 1 2 3 25 25 H 1.09002 * 109.46372 * 330.02481 * 1 2 3 26 26 H 1.09008 * 109.46784 * 60.00509 * 7 6 4 27 27 H 1.09000 * 109.47295 * 300.00761 * 7 6 4 28 28 H 1.08993 * 109.47662 * 299.99908 * 10 8 7 29 29 H 1.09002 * 109.47075 * 60.00414 * 10 8 7 30 30 H 1.09002 * 109.47153 * 60.00231 * 11 10 8 31 31 H 1.09001 * 109.47289 * 180.02562 * 11 10 8 32 32 H 0.96700 * 113.99696 * 179.97438 * 14 12 11 33 33 H 1.08996 * 109.46929 * 179.97438 * 15 12 11 34 34 H 1.09002 * 109.46716 * 60.00455 * 15 12 11 35 35 H 1.09002 * 109.47153 * 299.99641 * 16 15 12 36 36 H 1.09001 * 109.46832 * 179.97438 * 16 15 12 37 37 H 1.08000 * 126.51188 * 179.77434 * 17 3 2 38 38 H 1.07992 * 126.08207 * 180.17332 * 18 17 3 39 39 H 1.08998 * 109.47296 * 89.99828 * 20 19 2 40 40 H 0.96698 * 113.99849 * 180.02562 * 21 20 19 41 41 H 1.48498 * 110.00096 * 298.67872 * 22 20 19 42 42 H 1.48497 * 109.99843 * 60.00192 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2674 1.1191 0.0000 4 6 1.8123 2.5115 -0.0014 5 8 2.6245 3.4168 -0.0008 6 8 0.4923 2.7897 -0.0035 7 6 0.1140 4.1916 -0.0042 8 6 -1.4115 4.3081 -0.0072 9 1 -1.8172 3.7480 -0.8496 10 6 -1.9689 3.7393 1.2992 11 6 -3.4944 3.8564 1.2966 12 6 -3.8928 5.3283 1.1702 13 1 -3.4868 5.8882 2.0127 14 8 -5.3176 5.4377 1.1683 15 6 -3.3353 5.8971 -0.1361 16 6 -1.8098 5.7800 -0.1335 17 6 3.5785 0.6889 -0.0044 18 6 3.5494 -0.7088 0.0013 19 6 2.2514 -1.0969 0.0005 20 6 1.7642 -2.5230 0.0006 21 8 0.5059 -2.5965 0.6739 22 14 3.0027 -3.6022 0.8794 23 1 -0.3633 -0.0004 -1.0276 24 1 -0.3633 -0.8897 0.5142 25 1 -0.3632 0.8903 0.5135 26 1 0.5168 4.6760 -0.8938 27 1 0.5142 4.6764 0.8862 28 1 -1.6849 2.6909 1.3895 29 1 -1.5634 4.2995 2.1417 30 1 -3.9004 3.2965 0.4541 31 1 -3.8915 3.4516 2.2275 32 1 -5.6422 6.3453 1.0912 33 1 -3.6194 6.9455 -0.2264 34 1 -3.7412 5.3373 -0.9787 35 1 -1.4038 6.3399 0.7090 36 1 -1.4127 6.1849 -1.0644 37 1 4.4597 1.3134 -0.0090 38 1 4.4088 -1.3628 0.0025 39 1 1.6470 -2.8671 -1.0270 40 1 0.1319 -3.4874 0.7124 41 1 4.3069 -3.5594 0.1705 42 1 3.1714 -3.1434 2.2816 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_10804116_16737258.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 00:24:07 Heat of formation + Delta-G solvation = -127.480704 kcal Electronic energy + Delta-G solvation = -24588.079483 eV Core-core repulsion = 20921.220830 eV Total energy + Delta-G solvation = -3666.858652 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.150 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -42.66375 -41.09607 -40.03119 -37.95881 -37.63214 -36.55292 -33.95078 -32.20754 -31.93741 -31.48275 -27.75367 -27.41407 -26.20988 -24.04526 -23.42992 -22.29194 -21.46166 -21.03470 -20.52659 -18.87242 -18.57003 -18.26348 -17.82057 -17.53104 -16.79340 -16.70244 -16.19423 -15.76141 -15.58207 -15.28620 -15.00166 -14.93550 -14.60630 -14.29736 -14.09447 -13.85216 -13.83323 -13.53695 -13.39953 -13.26750 -13.11242 -13.05269 -12.65001 -12.44073 -12.20797 -11.98510 -11.92280 -11.90395 -11.58704 -11.49622 -11.19283 -10.79984 -10.73923 -9.79964 -9.20133 -5.07862 0.19670 1.04621 1.48956 1.55563 1.65391 1.88367 2.00600 2.17412 2.93949 3.09637 3.47951 3.48111 3.55831 3.61794 3.83324 3.89228 4.00149 4.08818 4.16361 4.21253 4.25351 4.29561 4.32497 4.35331 4.37642 4.43543 4.47415 4.53644 4.68909 4.83429 4.86534 4.94098 4.94684 4.99631 5.03851 5.07253 5.09498 5.19587 5.29796 5.40366 5.63025 5.90552 6.06902 6.34228 6.65518 6.79131 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.055 3.945 2 N -0.393 5.393 3 C -0.049 4.049 4 C 0.540 3.460 5 O -0.498 6.498 6 O -0.357 6.357 7 C 0.072 3.928 8 C -0.088 4.088 9 H 0.085 0.915 10 C -0.111 4.111 11 C -0.113 4.113 12 C 0.102 3.898 13 H 0.055 0.945 14 O -0.569 6.569 15 C -0.150 4.150 16 C -0.111 4.111 17 C -0.089 4.089 18 C -0.220 4.220 19 C 0.075 3.925 20 C -0.055 4.055 21 O -0.551 6.551 22 Si 0.717 3.283 23 H 0.074 0.926 24 H 0.117 0.883 25 H 0.094 0.906 26 H 0.074 0.926 27 H 0.074 0.926 28 H 0.075 0.925 29 H 0.066 0.934 30 H 0.071 0.929 31 H 0.072 0.928 32 H 0.379 0.621 33 H 0.069 0.931 34 H 0.073 0.927 35 H 0.069 0.931 36 H 0.072 0.928 37 H 0.156 0.844 38 H 0.149 0.851 39 H 0.084 0.916 40 H 0.388 0.612 41 H -0.252 1.252 42 H -0.252 1.252 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.035 -4.184 -0.770 5.226 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 N -0.067 5.067 3 C -0.159 4.159 4 C 0.386 3.614 5 O -0.386 6.386 6 O -0.275 6.275 7 C -0.002 4.002 8 C -0.107 4.107 9 H 0.104 0.896 10 C -0.149 4.149 11 C -0.150 4.150 12 C 0.044 3.956 13 H 0.073 0.927 14 O -0.374 6.374 15 C -0.187 4.187 16 C -0.148 4.148 17 C -0.115 4.115 18 C -0.244 4.244 19 C -0.045 4.045 20 C -0.164 4.164 21 O -0.359 6.359 22 Si 0.616 3.384 23 H 0.092 0.908 24 H 0.135 0.865 25 H 0.112 0.888 26 H 0.092 0.908 27 H 0.092 0.908 28 H 0.093 0.907 29 H 0.085 0.915 30 H 0.090 0.910 31 H 0.090 0.910 32 H 0.226 0.774 33 H 0.088 0.912 34 H 0.092 0.908 35 H 0.088 0.912 36 H 0.090 0.910 37 H 0.174 0.826 38 H 0.167 0.833 39 H 0.102 0.898 40 H 0.238 0.762 41 H -0.177 1.177 42 H -0.176 1.176 Dipole moment (debyes) X Y Z Total from point charges -2.328 -3.845 -0.232 4.501 hybrid contribution -0.093 1.439 -0.505 1.528 sum -2.421 -2.406 -0.737 3.492 Atomic orbital electron populations 1.22659 0.75143 1.06526 1.04142 1.43840 1.07353 1.04152 1.51306 1.19451 0.90838 0.83941 1.21675 1.19689 0.80754 0.87763 0.73237 1.90922 1.54833 1.46335 1.46511 1.86577 1.25559 1.30721 1.84606 1.23191 0.95514 0.78388 1.03095 1.21271 0.92134 0.97418 0.99863 0.89632 1.21559 0.94523 1.02012 0.96798 1.21476 0.95322 0.94888 1.03323 1.21850 0.80750 0.97050 0.95981 0.92684 1.86526 1.20962 1.33072 1.96878 1.22242 0.95569 1.01678 0.99247 1.21452 0.95697 0.94750 1.02950 1.21285 0.94429 0.94383 1.01356 1.20595 0.94905 0.95364 1.13510 1.20029 0.90602 0.87418 1.06430 1.24574 0.94384 0.95488 1.01996 1.86321 1.35126 1.35149 1.79270 0.95425 0.77647 0.85695 0.79662 0.90781 0.86497 0.88772 0.90779 0.90798 0.90662 0.91541 0.91018 0.90962 0.77392 0.91244 0.90820 0.91198 0.90971 0.82648 0.83330 0.89811 0.76196 1.17665 1.17589 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.02 10.22 59.85 0.61 0.63 16 2 N -0.39 -1.15 3.15 -115.78 -0.36 -1.51 16 3 C -0.05 -0.22 6.89 -81.99 -0.56 -0.78 16 4 C 0.54 2.56 7.92 34.06 0.27 2.83 16 5 O -0.50 -3.54 16.68 -19.36 -0.32 -3.86 16 6 O -0.36 -0.85 7.20 -41.04 -0.30 -1.15 16 7 C 0.07 0.05 4.85 37.16 0.18 0.23 16 8 C -0.09 0.09 2.44 -90.62 -0.22 -0.13 16 9 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 10 C -0.11 0.09 5.10 -26.73 -0.14 -0.04 16 11 C -0.11 0.02 5.57 -26.73 -0.15 -0.13 16 12 C 0.10 -0.04 3.47 -26.73 -0.09 -0.13 16 13 H 0.06 -0.04 8.14 -51.93 -0.42 -0.47 16 14 O -0.57 -0.50 13.32 -35.23 -0.47 -0.96 16 15 C -0.15 0.22 5.55 -26.73 -0.15 0.07 16 16 C -0.11 0.19 5.20 -26.73 -0.14 0.05 16 17 C -0.09 -0.35 10.66 -39.09 -0.42 -0.77 16 18 C -0.22 -0.64 9.37 -39.98 -0.37 -1.01 16 19 C 0.08 0.17 6.16 -82.19 -0.51 -0.33 16 20 C -0.06 0.08 2.97 36.01 0.11 0.18 16 21 O -0.55 1.30 9.71 -35.23 -0.34 0.96 16 22 Si 0.72 -1.59 31.22 -169.99 -5.31 -6.89 16 23 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 24 H 0.12 -0.04 5.18 -51.93 -0.27 -0.31 16 25 H 0.09 0.03 6.15 -51.93 -0.32 -0.29 16 26 H 0.07 0.06 8.14 -51.92 -0.42 -0.36 16 27 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 28 H 0.07 -0.04 7.82 -51.93 -0.41 -0.45 16 29 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 30 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 31 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 32 H 0.38 -1.14 9.08 45.56 0.41 -0.72 16 33 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 34 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 35 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 36 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 37 H 0.16 0.45 8.06 -52.49 -0.42 0.02 16 38 H 0.15 0.21 6.69 -52.49 -0.35 -0.14 16 39 H 0.08 -0.26 7.96 -51.93 -0.41 -0.67 16 40 H 0.39 -2.85 8.74 45.56 0.40 -2.45 16 41 H -0.25 -0.03 6.87 56.52 0.39 0.36 16 42 H -0.25 -0.46 7.11 56.52 0.40 -0.06 16 LS Contribution 339.00 15.07 5.11 5.11 Total: 0.00 -8.70 339.00 -9.22 -17.92 By element: Atomic # 1 Polarization: -4.63 SS G_CDS: -5.65 Total: -10.28 kcal Atomic # 6 Polarization: 2.25 SS G_CDS: -1.58 Total: 0.67 kcal Atomic # 7 Polarization: -1.15 SS G_CDS: -0.36 Total: -1.51 kcal Atomic # 8 Polarization: -3.58 SS G_CDS: -1.43 Total: -5.01 kcal Atomic # 14 Polarization: -1.59 SS G_CDS: -5.31 Total: -6.89 kcal Total LS contribution 5.11 Total: 5.11 kcal Total: -8.70 -9.22 -17.92 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_10804116_16737258.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -109.558 kcal (2) G-P(sol) polarization free energy of solvation -8.697 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -118.256 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.225 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.922 kcal (6) G-S(sol) free energy of system = (1) + (5) -127.481 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds