Wall clock time and date at job start Sat Mar 6 2021 00:49:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42891 * 114.00425 * 2 1 4 4 C 1.53005 * 112.84970 * 294.01987 * 3 2 1 5 5 F 1.39899 * 109.47142 * 195.88804 * 4 3 2 6 6 F 1.39901 * 109.47024 * 315.88389 * 4 3 2 7 7 F 1.39898 * 109.47201 * 75.88580 * 4 3 2 8 8 C 1.53779 * 113.69438 * 162.74967 * 3 2 1 9 9 C 1.53778 * 87.08122 * 270.87458 * 8 3 2 10 10 H 1.09000 * 113.61491 * 220.01505 * 9 8 3 11 11 C 1.53000 * 113.61687 * 89.11230 * 9 8 3 12 12 O 1.45206 * 109.47100 * 87.50404 * 11 9 8 13 13 C 1.34893 * 116.99957 * 180.02562 * 12 11 9 14 14 O 1.21623 * 120.00245 * 359.97438 * 13 12 11 15 15 C 1.46494 * 119.99624 * 180.02562 * 13 12 11 16 16 C 1.37993 * 126.25723 * 179.68835 * 15 13 12 17 17 C 1.39801 * 106.96705 * 179.90043 * 16 15 13 18 18 C 1.35485 * 107.84181 * 0.36152 * 17 16 15 19 19 C 1.50694 * 125.51020 * 179.79143 * 18 17 16 20 20 O 1.42904 * 109.47462 * 209.97521 * 19 18 17 21 21 Si 1.86302 * 109.47279 * 329.97659 * 19 18 17 22 22 N 1.34961 * 108.98438 * 359.77432 * 18 17 16 23 23 C 1.46500 * 125.63856 * 179.97438 * 22 18 17 24 24 C 1.53783 * 87.08181 * 334.56354 * 9 8 3 25 25 H 1.09005 * 109.46525 * 304.84298 * 1 2 3 26 26 H 1.09001 * 109.47470 * 64.83730 * 1 2 3 27 27 H 1.08999 * 109.47241 * 184.84184 * 1 2 3 28 28 H 1.08998 * 113.61643 * 156.32761 * 8 3 2 29 29 H 1.09003 * 113.61084 * 25.42199 * 8 3 2 30 30 H 1.08998 * 109.47496 * 207.50639 * 11 9 8 31 31 H 1.09004 * 109.46955 * 327.50408 * 11 9 8 32 32 H 1.08003 * 126.52109 * 0.03367 * 16 15 13 33 33 H 1.07998 * 126.08160 * 180.09657 * 17 16 15 34 34 H 1.09006 * 109.47181 * 89.97583 * 19 18 17 35 35 H 0.96703 * 114.00098 * 180.02562 * 20 19 18 36 36 H 1.48502 * 109.99956 * 178.67803 * 21 19 18 37 37 H 1.48496 * 110.00117 * 299.99843 * 21 19 18 38 38 H 1.08999 * 109.47355 * 270.01969 * 23 22 18 39 39 H 1.09006 * 109.46858 * 30.01615 * 23 22 18 40 40 H 1.08999 * 109.47501 * 150.01366 * 23 22 18 41 41 H 1.09000 * 113.61119 * 139.98089 * 24 9 8 42 42 H 1.09001 * 113.61603 * 270.80091 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3053 0.0000 4 6 1.7277 2.0816 -1.2879 5 9 2.6016 3.1703 -1.3774 6 9 1.9160 1.2407 -2.3900 7 9 0.4072 2.5434 -1.2738 8 6 3.4902 1.3228 0.4176 9 6 2.9983 1.4839 1.8656 10 1 3.5947 2.1809 2.4544 11 6 2.7568 0.1539 2.5825 12 8 3.9922 -0.2945 3.1999 13 6 3.9505 -1.4607 3.8764 14 8 2.9093 -2.0853 3.9483 15 6 5.1592 -1.9745 4.5255 16 6 5.2614 -3.1433 5.2519 17 6 6.5877 -3.2409 5.6831 18 6 7.2529 -2.1513 5.2295 19 6 8.7103 -1.8526 5.4699 20 8 8.9087 -0.4377 5.4958 21 14 9.2329 -2.5829 7.1022 22 7 6.3995 -1.3767 4.5273 23 6 6.7369 -0.1089 3.8752 24 6 1.7212 2.1084 1.2792 25 1 -0.3632 0.5872 0.8435 26 1 -0.3634 0.4369 -0.9301 27 1 -0.3634 -1.0240 0.0867 28 1 4.0391 2.1873 0.0442 29 1 4.0067 0.3806 0.2342 30 1 1.9947 0.2881 3.3502 31 1 2.4194 -0.5911 1.8619 32 1 4.4683 -3.8496 5.4480 33 1 7.0064 -4.0404 6.2763 34 1 9.3075 -2.2886 4.6690 35 1 9.8262 -0.1718 5.6464 36 1 10.6761 -2.3228 7.3362 37 1 8.4262 -1.9966 8.2025 38 1 6.5746 0.7129 4.5725 39 1 7.7831 -0.1248 3.5694 40 1 6.1042 0.0283 2.9982 41 1 0.8097 1.8005 1.7915 42 1 1.7860 3.1879 1.1427 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_10804116_17321610.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 00:49:14 Heat of formation + Delta-G solvation = -220.179436 kcal Electronic energy + Delta-G solvation = -32342.235685 eV Core-core repulsion = 27262.995387 eV Total energy + Delta-G solvation = -5079.240298 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.122 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -51.18780 -48.73617 -48.61833 -42.61380 -41.71032 -40.62624 -38.02498 -37.66801 -36.87994 -33.89864 -31.81513 -30.70121 -28.41047 -27.83055 -27.44840 -26.94910 -26.58040 -23.76220 -23.14537 -21.38721 -20.83145 -20.44962 -19.78589 -19.47900 -19.25131 -18.81941 -18.63162 -17.79509 -17.56650 -17.30373 -16.73837 -16.63947 -16.50688 -15.84633 -15.70734 -15.59097 -15.50940 -15.33598 -15.10371 -14.86914 -14.80527 -14.64907 -14.51189 -14.46381 -14.28281 -14.07126 -13.72089 -13.64302 -13.47597 -13.31596 -13.20552 -13.01124 -12.89777 -12.70257 -12.44442 -12.18633 -12.08418 -11.80691 -11.64717 -11.55772 -10.90096 -10.87991 -9.73393 -9.13117 -5.01123 0.24529 1.06379 1.47707 1.52803 1.55368 1.65568 1.83909 1.97380 2.00559 2.22824 2.51145 2.59478 2.79393 2.91178 3.14491 3.28314 3.39625 3.53616 3.58717 3.84088 3.96589 4.05876 4.11677 4.16860 4.19177 4.22625 4.28993 4.36234 4.39305 4.42409 4.48592 4.53547 4.56004 4.63996 4.65646 4.72419 4.86210 5.05164 5.15122 5.40255 5.60190 5.70968 5.96988 6.11261 6.18779 6.82312 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.010 3.990 2 O -0.332 6.332 3 C 0.039 3.961 4 C 0.437 3.563 5 F -0.175 7.175 6 F -0.174 7.174 7 F -0.181 7.181 8 C -0.113 4.113 9 C -0.100 4.100 10 H 0.106 0.894 11 C 0.079 3.921 12 O -0.359 6.359 13 C 0.541 3.459 14 O -0.497 6.497 15 C -0.051 4.051 16 C -0.087 4.087 17 C -0.209 4.209 18 C 0.074 3.926 19 C -0.059 4.059 20 O -0.542 6.542 21 Si 0.714 3.286 22 N -0.397 5.397 23 C 0.074 3.926 24 C -0.143 4.143 25 H 0.056 0.944 26 H 0.053 0.947 27 H 0.103 0.897 28 H 0.117 0.883 29 H 0.098 0.902 30 H 0.076 0.924 31 H 0.093 0.907 32 H 0.156 0.844 33 H 0.159 0.841 34 H 0.085 0.915 35 H 0.385 0.615 36 H -0.258 1.258 37 H -0.252 1.252 38 H 0.078 0.922 39 H 0.092 0.908 40 H 0.093 0.907 41 H 0.096 0.904 42 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.880 0.251 1.499 4.167 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 O -0.249 6.249 3 C -0.004 4.004 4 C 0.383 3.617 5 F -0.157 7.157 6 F -0.155 7.155 7 F -0.163 7.163 8 C -0.150 4.150 9 C -0.118 4.118 10 H 0.125 0.875 11 C 0.005 3.995 12 O -0.277 6.277 13 C 0.386 3.614 14 O -0.384 6.384 15 C -0.161 4.161 16 C -0.113 4.113 17 C -0.233 4.233 18 C -0.045 4.045 19 C -0.168 4.168 20 O -0.350 6.350 21 Si 0.613 3.387 22 N -0.071 5.071 23 C -0.067 4.067 24 C -0.181 4.181 25 H 0.074 0.926 26 H 0.072 0.928 27 H 0.122 0.878 28 H 0.135 0.865 29 H 0.117 0.883 30 H 0.095 0.905 31 H 0.112 0.888 32 H 0.174 0.826 33 H 0.176 0.824 34 H 0.102 0.898 35 H 0.235 0.765 36 H -0.183 1.183 37 H -0.176 1.176 38 H 0.096 0.904 39 H 0.111 0.889 40 H 0.112 0.888 41 H 0.114 0.886 42 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges 3.348 0.462 1.941 3.898 hybrid contribution 0.034 1.490 -0.848 1.715 sum 3.383 1.952 1.093 4.055 Atomic orbital electron populations 1.23157 0.79305 1.04528 1.01530 1.88098 1.21304 1.21721 1.93808 1.24026 0.99983 0.86459 0.89937 1.21168 0.74324 0.78689 0.87565 1.93177 1.69375 1.56492 1.96609 1.93223 1.94784 1.70841 1.56649 1.93194 1.36566 1.89667 1.96843 1.23280 0.91049 1.05714 0.94952 1.22117 0.97696 0.96478 0.95548 0.87534 1.22997 0.83926 0.95473 0.97061 1.86540 1.38929 1.38404 1.63779 1.19696 0.87178 0.78641 0.75864 1.90924 1.30861 1.58150 1.58507 1.19411 0.84211 0.99166 1.13348 1.21310 0.97249 0.95160 0.97592 1.20543 0.93721 1.00221 1.08773 1.19925 0.91230 0.93740 0.99644 1.24603 0.93391 0.86103 1.12696 1.86545 1.33549 1.20176 1.94732 0.94350 0.79173 0.90792 0.74433 1.43792 1.07240 1.18065 1.37981 1.22292 1.03189 0.82682 0.98498 1.23600 0.99620 1.01139 0.93692 0.92569 0.92791 0.87836 0.86459 0.88324 0.90540 0.88844 0.82596 0.82408 0.89763 0.76550 1.18310 1.17595 0.90372 0.88929 0.88842 0.88569 0.86810 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.30 101.05 1.04 1.03 16 2 O -0.33 -0.27 8.37 -35.23 -0.29 -0.56 16 3 C 0.04 -0.01 0.84 -89.80 -0.08 -0.09 16 4 C 0.44 0.48 2.52 37.16 0.09 0.57 16 5 F -0.18 -0.17 15.81 2.25 0.04 -0.14 16 6 F -0.17 -0.51 17.10 2.25 0.04 -0.47 16 7 F -0.18 -0.26 15.39 2.25 0.03 -0.23 16 8 C -0.11 0.18 6.89 -25.92 -0.18 0.00 16 9 C -0.10 0.20 4.21 -89.81 -0.38 -0.18 16 10 H 0.11 -0.32 8.14 -51.93 -0.42 -0.74 16 11 C 0.08 0.03 5.06 37.16 0.19 0.21 16 12 O -0.36 -0.64 7.65 -41.02 -0.31 -0.95 16 13 C 0.54 2.15 7.92 34.06 0.27 2.42 16 14 O -0.50 -3.14 16.68 -19.36 -0.32 -3.47 16 15 C -0.05 -0.17 6.88 -82.00 -0.56 -0.73 16 16 C -0.09 -0.20 10.66 -39.09 -0.42 -0.61 16 17 C -0.21 -0.10 9.37 -39.98 -0.37 -0.48 16 18 C 0.07 0.07 6.16 -82.20 -0.51 -0.43 16 19 C -0.06 0.10 2.87 36.00 0.10 0.20 16 20 O -0.54 0.75 10.32 -35.23 -0.36 0.39 16 21 Si 0.71 -1.59 31.10 -169.99 -5.29 -6.88 16 22 N -0.40 -0.79 3.15 -115.78 -0.36 -1.15 16 23 C 0.07 -0.01 9.33 59.85 0.56 0.55 16 24 C -0.14 0.33 6.51 -25.92 -0.17 0.16 16 25 H 0.06 -0.12 6.55 -51.93 -0.34 -0.46 16 26 H 0.05 -0.02 6.69 -51.93 -0.35 -0.37 16 27 H 0.10 -0.19 8.14 -51.93 -0.42 -0.61 16 28 H 0.12 -0.32 7.02 -51.93 -0.36 -0.68 16 29 H 0.10 -0.09 8.10 -51.93 -0.42 -0.52 16 30 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 31 H 0.09 0.14 6.12 -51.93 -0.32 -0.18 16 32 H 0.16 0.19 8.06 -52.48 -0.42 -0.24 16 33 H 0.16 -0.43 6.85 -52.49 -0.36 -0.79 16 34 H 0.08 -0.28 7.96 -51.93 -0.41 -0.70 16 35 H 0.39 -2.02 8.74 45.56 0.40 -1.62 16 36 H -0.26 0.14 7.11 56.52 0.40 0.54 16 37 H -0.25 -0.44 7.11 56.52 0.40 -0.04 16 38 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 39 H 0.09 -0.10 6.77 -51.93 -0.35 -0.45 16 40 H 0.09 -0.06 6.15 -51.93 -0.32 -0.38 16 41 H 0.10 -0.27 6.63 -51.93 -0.34 -0.61 16 42 H 0.11 -0.38 8.05 -51.93 -0.42 -0.79 16 LS Contribution 355.55 15.07 5.36 5.36 Total: 0.00 -8.16 355.55 -6.80 -14.96 By element: Atomic # 1 Polarization: -4.56 SS G_CDS: -4.91 Total: -9.47 kcal Atomic # 6 Polarization: 3.02 SS G_CDS: -0.41 Total: 2.61 kcal Atomic # 7 Polarization: -0.79 SS G_CDS: -0.36 Total: -1.15 kcal Atomic # 8 Polarization: -3.30 SS G_CDS: -1.30 Total: -4.59 kcal Atomic # 9 Polarization: -0.94 SS G_CDS: 0.11 Total: -0.83 kcal Atomic # 14 Polarization: -1.59 SS G_CDS: -5.29 Total: -6.88 kcal Total LS contribution 5.36 Total: 5.36 kcal Total: -8.16 -6.80 -14.96 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_10804116_17321610.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -205.221 kcal (2) G-P(sol) polarization free energy of solvation -8.162 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -213.382 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.797 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.959 kcal (6) G-S(sol) free energy of system = (1) + (5) -220.179 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds