Wall clock time and date at job start Sat Mar 6 2021 01:07:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.37702 * 125.63389 * 2 1 4 4 C 1.46494 * 126.26053 * 359.97438 * 3 2 1 5 5 O 1.21625 * 119.99664 * 179.97438 * 4 3 2 6 6 O 1.34887 * 120.00288 * 359.97438 * 4 3 2 7 7 C 1.45204 * 117.00232 * 179.97438 * 6 4 3 8 8 Si 1.86301 * 109.46914 * 74.99600 * 7 6 4 9 9 C 1.86302 * 109.46976 * 60.00402 * 8 7 6 10 10 C 1.86304 * 109.46807 * 180.02562 * 8 7 6 11 11 C 1.86300 * 109.47323 * 300.00055 * 8 7 6 12 12 C 1.37989 * 107.47406 * 179.97438 * 3 2 1 13 13 C 1.39805 * 106.96991 * 0.02562 * 12 3 2 14 14 C 1.34956 * 125.63723 * 179.97438 * 2 1 3 15 15 C 1.50697 * 125.50807 * 0.05513 * 14 2 1 16 16 O 1.42902 * 109.47289 * 29.98460 * 15 14 2 17 17 Si 1.86303 * 109.47500 * 149.98109 * 15 14 2 18 18 H 1.48503 * 109.46461 * 60.00071 * 17 15 14 19 19 H 1.48492 * 109.47408 * 179.97438 * 17 15 14 20 20 H 1.48500 * 109.47263 * 300.00437 * 17 15 14 21 21 H 1.09001 * 109.47277 * 90.02488 * 1 2 3 22 22 H 1.09002 * 109.46543 * 210.02279 * 1 2 3 23 23 H 1.08995 * 109.46992 * 330.02368 * 1 2 3 24 24 H 1.08992 * 109.47100 * 194.99550 * 7 6 4 25 25 H 1.08997 * 109.46515 * 315.00232 * 7 6 4 26 26 H 1.09002 * 109.47393 * 60.00229 * 9 8 7 27 27 H 1.09005 * 109.47108 * 180.02562 * 9 8 7 28 28 H 1.08997 * 109.47097 * 299.99441 * 9 8 7 29 29 H 1.08992 * 109.47048 * 60.00152 * 10 8 7 30 30 H 1.09004 * 109.46900 * 180.02562 * 10 8 7 31 31 H 1.09002 * 109.46919 * 299.99653 * 10 8 7 32 32 H 1.09003 * 109.46571 * 60.00457 * 11 8 7 33 33 H 1.09004 * 109.46775 * 179.97438 * 11 8 7 34 34 H 1.08992 * 109.47355 * 300.00352 * 11 8 7 35 35 H 1.08004 * 126.51751 * 180.02562 * 12 3 2 36 36 H 1.07995 * 126.07695 * 179.74022 * 13 12 3 37 37 H 1.08996 * 109.47645 * 269.98439 * 15 14 2 38 38 H 0.96703 * 114.00055 * 60.00036 * 16 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2673 1.1192 0.0000 4 6 1.8120 2.5116 -0.0005 5 8 2.6242 3.4169 0.0000 6 8 0.4921 2.7897 -0.0016 7 6 0.1137 4.1915 -0.0015 8 14 0.3925 4.9101 -1.6976 9 6 -0.6438 3.9873 -2.9409 10 6 -0.0923 6.7089 -1.6972 11 6 2.1927 4.7528 -2.1506 12 6 3.5784 0.6891 0.0006 13 6 3.5494 -0.7086 0.0003 14 6 2.2514 -1.0968 0.0005 15 6 1.7643 -2.5229 -0.0001 16 8 0.5066 -2.5965 -0.6744 17 14 3.0035 -3.6021 -0.8779 18 1 4.3106 -3.5256 -0.1771 19 1 2.5239 -5.0074 -0.8779 20 1 3.1643 -3.1334 -2.2778 21 1 -0.3634 -0.0004 -1.0277 22 1 -0.3632 -0.8898 0.5142 23 1 -0.3633 0.8902 0.5134 24 1 -0.9395 4.2835 0.2635 25 1 0.7201 4.7313 0.7259 26 1 -1.6971 4.0794 -2.6759 27 1 -0.4804 4.4074 -3.9333 28 1 -0.3597 2.9350 -2.9410 29 1 0.5142 7.2485 -0.9700 30 1 0.0703 7.1292 -2.6898 31 1 -1.1455 6.8013 -1.4321 32 1 2.4766 3.7004 -2.1507 33 1 2.3556 5.1728 -3.1432 34 1 2.7989 5.2926 -1.4233 35 1 4.4597 1.3136 0.0011 36 1 4.4089 -1.3626 -0.0033 37 1 1.6464 -2.8670 1.0274 38 1 0.5367 -2.3050 -1.5959 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_10804116_4858416.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 01:07:39 Heat of formation + Delta-G solvation = -101.181658 kcal Electronic energy + Delta-G solvation = -19691.053940 eV Core-core repulsion = 16658.650168 eV Total energy + Delta-G solvation = -3032.403773 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 271.120 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -42.67493 -40.90332 -37.92115 -37.26673 -33.94592 -31.64794 -29.73951 -28.56011 -28.44194 -28.33398 -27.50007 -26.50325 -23.40180 -21.43984 -20.69705 -18.96009 -18.39781 -17.78264 -17.47883 -16.74547 -16.30000 -15.58403 -15.41616 -14.91840 -14.71637 -14.49186 -14.30030 -14.13700 -14.01401 -13.86348 -13.72569 -13.46108 -13.35374 -13.32163 -13.09416 -13.06258 -12.87537 -12.49957 -12.42704 -12.11681 -11.98473 -11.55749 -10.94046 -10.82999 -10.77063 -10.41608 -9.78225 -9.18402 0.22249 0.95161 1.39213 1.44142 1.45151 1.50974 1.60082 1.76786 1.81920 1.96383 2.03803 2.23891 2.51944 3.13395 3.44842 3.81509 3.94795 4.17179 4.26917 4.36131 4.39043 4.51695 4.60709 4.64212 4.66606 4.69105 4.70534 4.74516 4.91042 4.96767 5.02437 5.09114 5.36889 5.40649 5.47117 5.64336 5.76444 5.92079 6.07504 6.27332 6.85143 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.062 3.938 2 N -0.399 5.399 3 C -0.047 4.047 4 C 0.523 3.477 5 O -0.483 6.483 6 O -0.341 6.341 7 C -0.238 4.238 8 Si 0.998 3.002 9 C -0.445 4.445 10 C -0.446 4.446 11 C -0.437 4.437 12 C -0.090 4.090 13 C -0.216 4.216 14 C 0.027 3.973 15 C -0.065 4.065 16 O -0.542 6.542 17 Si 0.977 3.023 18 H -0.246 1.246 19 H -0.251 1.251 20 H -0.249 1.249 21 H 0.079 0.921 22 H 0.100 0.900 23 H 0.095 0.905 24 H 0.109 0.891 25 H 0.081 0.919 26 H 0.070 0.930 27 H 0.072 0.928 28 H 0.068 0.932 29 H 0.072 0.928 30 H 0.075 0.925 31 H 0.070 0.930 32 H 0.066 0.934 33 H 0.062 0.938 34 H 0.077 0.923 35 H 0.155 0.845 36 H 0.152 0.848 37 H 0.126 0.874 38 H 0.378 0.622 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.273 -1.708 -0.973 3.005 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 N -0.073 5.073 3 C -0.157 4.157 4 C 0.368 3.632 5 O -0.371 6.371 6 O -0.258 6.258 7 C -0.357 4.357 8 Si 1.194 2.806 9 C -0.553 4.553 10 C -0.555 4.555 11 C -0.545 4.545 12 C -0.116 4.116 13 C -0.240 4.240 14 C -0.092 4.092 15 C -0.174 4.174 16 O -0.347 6.347 17 Si 0.796 3.204 18 H -0.169 1.169 19 H -0.174 1.174 20 H -0.172 1.172 21 H 0.098 0.902 22 H 0.119 0.881 23 H 0.114 0.886 24 H 0.127 0.873 25 H 0.100 0.900 26 H 0.089 0.911 27 H 0.091 0.909 28 H 0.087 0.913 29 H 0.091 0.909 30 H 0.094 0.906 31 H 0.089 0.911 32 H 0.085 0.915 33 H 0.081 0.919 34 H 0.096 0.904 35 H 0.172 0.828 36 H 0.169 0.831 37 H 0.144 0.856 38 H 0.226 0.774 Dipole moment (debyes) X Y Z Total from point charges -2.088 -2.105 -0.768 3.063 hybrid contribution -0.219 0.771 -0.031 0.802 sum -2.307 -1.334 -0.798 2.782 Atomic orbital electron populations 1.22441 0.75367 1.05638 1.04377 1.43829 1.07133 1.04386 1.51987 1.19463 0.90816 0.83852 1.21524 1.19785 0.81247 0.87945 0.74252 1.90910 1.54638 1.45858 1.45675 1.86519 1.25370 1.29475 1.84408 1.28349 1.04154 0.82754 1.20395 0.79713 0.68575 0.67335 0.64965 1.26057 1.09236 1.08432 1.11561 1.26041 1.05597 1.18797 1.05017 1.26242 1.18547 1.04933 1.04745 1.21322 0.94318 0.94658 1.01329 1.20734 0.95264 0.95326 1.12637 1.21057 0.91071 0.89479 1.07637 1.24939 0.94290 0.94227 1.03965 1.86503 1.29898 1.89109 1.29146 0.85309 0.76921 0.78197 0.79928 1.16899 1.17437 1.17248 0.90248 0.88120 0.88624 0.87254 0.90003 0.91090 0.90934 0.91265 0.90917 0.90634 0.91076 0.91471 0.91923 0.90365 0.82777 0.83090 0.85620 0.77400 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.07 9.33 59.85 0.56 0.49 16 2 N -0.40 -0.41 3.15 -115.78 -0.36 -0.78 16 3 C -0.05 -0.13 6.89 -81.99 -0.56 -0.69 16 4 C 0.52 1.69 6.69 34.06 0.23 1.92 16 5 O -0.48 -2.34 12.59 -19.36 -0.24 -2.59 16 6 O -0.34 -0.51 7.35 -41.00 -0.30 -0.81 16 7 C -0.24 0.07 5.40 101.05 0.55 0.61 16 8 Si 1.00 -1.25 12.12 -169.99 -2.06 -3.31 16 9 C -0.44 0.43 8.65 101.05 0.87 1.30 16 10 C -0.45 0.55 8.65 101.05 0.87 1.43 16 11 C -0.44 -0.64 7.10 101.05 0.72 0.08 16 12 C -0.09 -0.21 10.66 -39.09 -0.42 -0.62 16 13 C -0.22 -0.19 9.37 -39.98 -0.37 -0.56 16 14 C 0.03 0.01 6.13 -82.20 -0.50 -0.50 16 15 C -0.06 0.12 2.87 36.00 0.10 0.22 16 16 O -0.54 1.03 10.35 -35.23 -0.36 0.66 16 17 Si 0.98 -1.84 26.54 -169.99 -4.51 -6.36 16 18 H -0.25 0.36 6.79 56.52 0.38 0.74 16 19 H -0.25 0.17 7.11 56.52 0.40 0.57 16 20 H -0.25 0.24 7.11 56.52 0.40 0.64 16 21 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 22 H 0.10 -0.17 6.77 -51.93 -0.35 -0.52 16 23 H 0.10 -0.08 6.15 -51.93 -0.32 -0.40 16 24 H 0.11 -0.26 7.96 -51.93 -0.41 -0.67 16 25 H 0.08 0.03 7.53 -51.93 -0.39 -0.36 16 26 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 27 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 28 H 0.07 -0.03 7.96 -51.93 -0.41 -0.44 16 29 H 0.07 -0.07 7.96 -51.93 -0.41 -0.49 16 30 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 31 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 32 H 0.07 0.19 6.27 -51.93 -0.33 -0.13 16 33 H 0.06 0.05 7.96 -51.93 -0.41 -0.36 16 34 H 0.08 0.20 7.42 -51.93 -0.39 -0.18 16 35 H 0.15 0.22 8.06 -52.48 -0.42 -0.20 16 36 H 0.15 -0.14 6.63 -52.49 -0.35 -0.49 16 37 H 0.13 -0.34 7.96 -51.93 -0.41 -0.75 16 38 H 0.38 -1.70 8.70 45.56 0.40 -1.31 16 LS Contribution 312.19 15.07 4.70 4.70 Total: 0.00 -5.62 312.19 -6.20 -11.82 By element: Atomic # 1 Polarization: -1.92 SS G_CDS: -5.11 Total: -7.02 kcal Atomic # 6 Polarization: 1.63 SS G_CDS: 2.04 Total: 3.67 kcal Atomic # 7 Polarization: -0.41 SS G_CDS: -0.36 Total: -0.78 kcal Atomic # 8 Polarization: -1.82 SS G_CDS: -0.91 Total: -2.73 kcal Atomic # 14 Polarization: -3.10 SS G_CDS: -6.57 Total: -9.67 kcal Total LS contribution 4.70 Total: 4.70 kcal Total: -5.62 -6.20 -11.82 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_10804116_4858416.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -89.361 kcal (2) G-P(sol) polarization free energy of solvation -5.616 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.977 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.205 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -11.821 kcal (6) G-S(sol) free energy of system = (1) + (5) -101.182 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds