Wall clock time and date at job start Sat Mar 6 2021 02:03:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.08996 * 109.46952 * 2 1 4 4 C 1.52996 * 109.47131 * 120.00306 * 2 1 3 5 5 C 1.52997 * 109.47131 * 179.97438 * 4 2 1 6 6 C 1.52999 * 109.46991 * 299.99311 * 5 4 2 7 7 H 1.08993 * 109.47839 * 300.00447 * 6 5 4 8 8 C 1.50698 * 109.46824 * 179.97438 * 6 5 4 9 9 O 1.20825 * 119.99963 * 240.00151 * 8 6 5 10 10 O 1.34225 * 119.99990 * 60.00712 * 8 6 5 11 11 C 1.45205 * 116.99943 * 179.97438 * 10 8 6 12 12 C 1.50703 * 109.46946 * 180.02562 * 11 10 8 13 13 C 1.38940 * 120.03889 * 180.02562 * 12 11 10 14 14 O 1.34886 * 120.98602 * 359.95163 * 13 12 11 15 15 C 1.33713 * 122.41122 * 179.97438 * 14 13 12 16 16 C 1.34541 * 122.85586 * 0.04698 * 15 14 13 17 17 C 1.50699 * 120.20073 * 179.97438 * 16 15 14 18 18 O 1.42902 * 109.47087 * 249.97747 * 17 16 15 19 19 Si 1.86295 * 109.47185 * 9.97877 * 17 16 15 20 20 C 1.42001 * 119.59688 * 359.97438 * 16 15 14 21 21 O 1.21912 * 121.41040 * 179.97438 * 20 16 15 22 22 C 1.40452 * 119.33866 * 179.97438 * 13 12 11 23 23 C 1.39344 * 120.23710 * 0.02562 * 22 13 12 24 24 C 1.37891 * 119.52751 * 0.02562 * 23 22 13 25 25 Br 1.89102 * 119.86336 * 180.02562 * 24 23 22 26 26 C 1.37868 * 120.04134 * 359.71893 * 12 11 10 27 27 C 1.53006 * 109.46626 * 60.00378 * 6 5 4 28 28 C 1.52997 * 109.47127 * 299.99539 * 27 6 5 29 29 H 1.09000 * 109.47611 * 180.02562 * 1 2 3 30 30 H 1.09001 * 109.47289 * 299.99744 * 1 2 3 31 31 H 1.09002 * 109.47153 * 59.99828 * 1 2 3 32 32 H 1.09001 * 109.46993 * 300.00131 * 4 2 1 33 33 H 1.09000 * 109.47380 * 59.99237 * 4 2 1 34 34 H 1.09002 * 109.47153 * 179.97438 * 5 4 2 35 35 H 1.08993 * 109.47194 * 60.00154 * 5 4 2 36 36 H 1.09004 * 109.47173 * 299.99484 * 11 10 8 37 37 H 1.08993 * 109.47243 * 59.99977 * 11 10 8 38 38 H 1.07997 * 118.57245 * 180.02562 * 15 14 13 39 39 H 1.09001 * 109.46937 * 129.98088 * 17 16 15 40 40 H 0.96703 * 113.99989 * 60.00148 * 18 17 16 41 41 H 1.48501 * 110.00028 * 58.67870 * 19 17 16 42 42 H 1.48502 * 110.00009 * 179.97438 * 19 17 16 43 43 H 1.08007 * 120.23733 * 180.02562 * 23 22 13 44 44 H 1.08005 * 119.64685 * 0.02562 * 26 12 11 45 45 H 1.09001 * 109.46801 * 59.99811 * 27 6 5 46 46 H 1.09001 * 109.46998 * 179.97438 * 27 6 5 47 47 H 1.09002 * 109.47153 * 180.02562 * 28 27 6 48 48 H 1.08996 * 109.46952 * 300.00302 * 28 27 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0276 0.0000 4 6 2.0400 -0.7213 1.2492 5 6 3.5699 -0.7219 1.2488 6 6 4.0794 -1.4436 -0.0003 7 1 3.7157 -2.4710 -0.0002 8 6 5.5864 -1.4435 -0.0009 9 8 6.1901 -0.9206 -0.9075 10 8 6.2579 -2.0245 1.0056 11 6 7.7079 -1.9870 0.9389 12 6 8.2844 -2.6835 2.1446 13 6 9.6617 -2.7750 2.3026 14 8 10.5021 -2.2483 1.3883 15 6 11.8316 -2.3194 1.5120 16 6 12.4368 -2.9200 2.5527 17 6 13.9410 -2.9659 2.6315 18 8 14.3882 -4.3069 2.4227 19 14 14.6656 -1.8584 1.3204 20 6 11.6495 -3.5103 3.5765 21 8 12.1631 -4.0633 4.5339 22 6 10.1831 -3.4268 3.4321 23 6 9.3257 -3.9761 4.3834 24 6 7.9618 -3.8755 4.2076 25 35 6.7895 -4.6168 5.4930 26 6 7.4457 -3.2251 3.0955 27 6 3.5694 -0.7222 -1.2496 28 6 2.0394 -0.7217 -1.2493 29 1 -0.3634 -1.0276 0.0005 30 1 -0.3634 0.5138 0.8900 31 1 -0.3633 0.5139 -0.8900 32 1 1.6766 -0.2075 2.1392 33 1 1.6765 -1.7489 1.2492 34 1 3.9333 -1.2353 2.1390 35 1 3.9336 0.3056 1.2487 36 1 8.0432 -2.4923 0.0331 37 1 8.0442 -0.9504 0.9224 38 1 12.4463 -1.8758 0.7428 39 1 14.2639 -2.6242 3.6149 40 1 14.1360 -4.6767 1.5655 41 1 14.1827 -0.4666 1.5075 42 1 16.1486 -1.8943 1.3880 43 1 9.7267 -4.4770 5.2523 44 1 6.3757 -3.1474 2.9705 45 1 3.9331 0.3053 -1.2497 46 1 3.9326 -1.2361 -2.1396 47 1 1.6760 -0.2082 -2.1395 48 1 1.6757 -1.7492 -1.2490 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_11733144_484008.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 02:03:24 Heat of formation + Delta-G solvation = -139.051599 kcal Electronic energy + Delta-G solvation = -34015.180895 eV Core-core repulsion = 29241.841645 eV Total energy + Delta-G solvation = -4773.339250 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 437.065 amu Computer time = 1.44 seconds Orbital eigenvalues (eV) -43.35175 -41.86722 -40.18200 -39.99559 -39.31539 -37.91196 -37.60194 -34.65890 -33.92532 -33.60074 -33.10069 -31.70240 -30.73970 -28.78005 -27.55092 -27.48154 -25.87358 -24.46361 -23.80993 -23.57231 -22.42607 -21.55097 -20.73981 -20.60310 -19.55325 -19.06370 -18.50783 -17.97681 -17.77560 -17.58126 -17.41853 -16.78858 -16.46487 -16.25528 -16.09579 -15.92014 -15.49792 -15.33901 -15.29761 -15.21619 -15.09429 -14.82473 -14.48820 -14.27604 -14.11943 -14.05804 -13.97691 -13.58963 -13.26944 -13.16089 -13.06719 -12.78986 -12.45089 -12.39876 -12.26911 -12.09924 -12.02338 -11.95926 -11.82282 -11.74014 -11.52712 -11.35617 -11.28610 -11.07026 -10.93758 -10.70915 -10.45078 -10.41825 -9.59307 -5.14382 -0.86034 -0.71169 0.03110 0.33089 0.96581 1.11512 1.15593 1.39330 1.39969 1.58433 1.96356 2.26680 2.67344 2.85215 3.18479 3.31400 3.43563 3.52319 3.65079 3.65397 3.71871 3.73725 3.85807 3.97080 4.04746 4.10475 4.12791 4.13820 4.18823 4.26804 4.30983 4.39634 4.47022 4.54973 4.57033 4.60890 4.64181 4.65217 4.77705 4.82236 4.93220 4.99017 5.01834 5.03597 5.14751 5.17880 5.24615 5.27383 5.35381 5.42230 5.46268 5.61449 5.74189 6.30753 6.63813 6.75615 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.097 4.097 3 H 0.064 0.936 4 C -0.111 4.111 5 C -0.108 4.108 6 C -0.074 4.074 7 H 0.130 0.870 8 C 0.472 3.528 9 O -0.530 6.530 10 O -0.351 6.351 11 C 0.116 3.884 12 C -0.096 4.096 13 C 0.166 3.834 14 O -0.201 6.201 15 C 0.178 3.822 16 C -0.341 4.341 17 C -0.063 4.063 18 O -0.558 6.558 19 Si 0.803 3.197 20 C 0.424 3.576 21 O -0.497 6.497 22 C -0.227 4.227 23 C -0.010 4.010 24 C -0.120 4.120 25 Br -0.025 7.025 26 C -0.007 4.007 27 C -0.103 4.103 28 C -0.110 4.110 29 H 0.058 0.942 30 H 0.054 0.946 31 H 0.052 0.948 32 H 0.071 0.929 33 H 0.075 0.925 34 H 0.087 0.913 35 H 0.061 0.939 36 H 0.104 0.896 37 H 0.100 0.900 38 H 0.247 0.753 39 H 0.089 0.911 40 H 0.395 0.605 41 H -0.259 1.259 42 H -0.296 1.296 43 H 0.144 0.856 44 H 0.177 0.823 45 H 0.059 0.941 46 H 0.066 0.934 47 H 0.067 0.933 48 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.433 2.277 -6.725 8.940 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.115 4.115 3 H 0.083 0.917 4 C -0.148 4.148 5 C -0.146 4.146 6 C -0.093 4.093 7 H 0.147 0.853 8 C 0.317 3.683 9 O -0.419 6.419 10 O -0.268 6.268 11 C 0.043 3.957 12 C -0.098 4.098 13 C 0.120 3.880 14 O -0.103 6.103 15 C 0.113 3.887 16 C -0.344 4.344 17 C -0.170 4.170 18 O -0.366 6.366 19 Si 0.704 3.296 20 C 0.310 3.690 21 O -0.381 6.381 22 C -0.229 4.229 23 C -0.030 4.030 24 C -0.200 4.200 25 Br 0.061 6.939 26 C -0.026 4.026 27 C -0.140 4.140 28 C -0.148 4.148 29 H 0.077 0.923 30 H 0.074 0.926 31 H 0.071 0.929 32 H 0.090 0.910 33 H 0.094 0.906 34 H 0.105 0.895 35 H 0.080 0.920 36 H 0.121 0.879 37 H 0.118 0.882 38 H 0.262 0.738 39 H 0.107 0.893 40 H 0.245 0.755 41 H -0.185 1.185 42 H -0.224 1.224 43 H 0.162 0.838 44 H 0.194 0.806 45 H 0.078 0.922 46 H 0.085 0.915 47 H 0.086 0.914 48 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -4.794 2.735 -5.746 7.967 hybrid contribution 0.740 -0.191 0.985 1.246 sum -4.054 2.544 -4.761 6.751 Atomic orbital electron populations 1.21827 0.94915 1.02114 1.01742 1.21192 0.95747 0.99543 0.95026 0.91745 1.21589 0.93723 1.01699 0.97802 1.21538 0.96826 1.00478 0.95759 1.21249 0.84520 1.04597 0.98940 0.85265 1.24253 0.92298 0.73451 0.78329 1.90696 1.71088 1.43141 1.36964 1.86406 1.21150 1.71842 1.47381 1.21574 0.76744 1.01886 0.95524 1.18849 0.88214 1.04048 0.98677 1.18863 0.88901 0.93104 0.87112 1.83169 1.16582 1.66069 1.44529 1.24426 0.79391 0.88968 0.95902 1.21968 0.99951 1.12239 1.00229 1.25212 0.89562 0.92427 1.09771 1.86551 1.78624 1.28210 1.43208 0.94442 0.78343 0.75407 0.81449 1.18793 0.87225 0.77403 0.85585 1.90748 1.76013 1.38551 1.32745 1.20734 0.96636 1.07528 0.98034 1.21116 0.91128 0.93333 0.97407 1.21861 0.93603 1.06253 0.98290 1.96844 1.60750 1.82931 1.53359 1.21239 1.02274 0.90287 0.88848 1.21426 0.96303 1.00560 0.95729 1.21588 0.93493 1.01635 0.98062 0.92269 0.92649 0.92867 0.91005 0.90635 0.89488 0.91986 0.87855 0.88205 0.73793 0.89317 0.75547 1.18455 1.22372 0.83840 0.80579 0.92184 0.91525 0.91388 0.90763 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.70 9.19 71.98 0.66 1.37 16 2 C -0.10 0.48 2.72 -10.79 -0.03 0.45 16 3 H 0.06 -0.22 8.14 -2.39 -0.02 -0.24 16 4 C -0.11 0.73 5.20 30.59 0.16 0.89 16 5 C -0.11 0.67 5.13 30.59 0.16 0.83 16 6 C -0.07 0.36 2.63 -11.54 -0.03 0.33 16 7 H 0.13 -1.07 8.14 -2.39 -0.02 -1.09 16 8 C 0.47 -0.36 7.25 71.24 0.52 0.15 16 9 O -0.53 -2.83 15.73 21.97 0.35 -2.49 16 10 O -0.35 1.09 8.58 -51.37 -0.44 0.65 16 11 C 0.12 -0.47 5.38 71.24 0.38 -0.09 16 12 C -0.10 0.26 5.89 -19.78 -0.12 0.14 16 13 C 0.17 -0.16 6.74 22.98 0.15 0.00 16 14 O -0.20 1.08 9.21 -2.74 -0.03 1.06 16 15 C 0.18 -1.36 9.99 66.97 0.67 -0.69 16 16 C -0.34 -0.11 5.32 -19.78 -0.11 -0.21 16 17 C -0.06 -0.06 2.46 71.24 0.17 0.11 16 18 O -0.56 -1.99 12.88 -148.98 -1.92 -3.91 16 19 Si 0.80 -5.51 29.86 68.60 2.05 -3.47 16 20 C 0.42 3.43 6.98 25.67 0.18 3.61 16 21 O -0.50 -8.37 16.93 -5.03 -0.09 -8.46 16 22 C -0.23 -0.94 5.89 -20.01 -0.12 -1.06 16 23 C -0.01 -0.04 9.40 22.45 0.21 0.17 16 24 C -0.12 -0.13 6.22 22.32 0.14 0.01 16 25 Br -0.02 -0.03 33.69 -20.37 -0.69 -0.71 16 26 C -0.01 0.02 9.10 22.31 0.20 0.22 16 27 C -0.10 0.31 4.49 30.60 0.14 0.45 16 28 C -0.11 0.55 5.20 30.59 0.16 0.71 16 29 H 0.06 -0.30 8.14 -2.39 -0.02 -0.32 16 30 H 0.05 -0.25 8.14 -2.39 -0.02 -0.26 16 31 H 0.05 -0.21 8.14 -2.39 -0.02 -0.23 16 32 H 0.07 -0.47 8.14 -2.39 -0.02 -0.48 16 33 H 0.07 -0.58 8.14 -2.39 -0.02 -0.60 16 34 H 0.09 -0.67 8.11 -2.39 -0.02 -0.69 16 35 H 0.06 -0.27 8.14 -2.39 -0.02 -0.29 16 36 H 0.10 -0.54 8.13 -2.39 -0.02 -0.56 16 37 H 0.10 -0.47 8.13 -2.39 -0.02 -0.48 16 38 H 0.25 -4.23 4.77 -2.91 -0.01 -4.24 16 39 H 0.09 0.56 7.96 -2.39 -0.02 0.54 16 40 H 0.39 -2.78 8.70 -74.06 -0.64 -3.42 16 41 H -0.26 1.27 7.11 99.48 0.71 1.98 16 42 H -0.30 -0.64 7.11 99.48 0.71 0.07 16 43 H 0.14 0.87 7.81 -2.91 -0.02 0.84 16 44 H 0.18 -0.94 6.96 -2.91 -0.02 -0.96 16 45 H 0.06 -0.02 8.10 -2.39 -0.02 -0.03 16 46 H 0.07 -0.10 8.10 -2.39 -0.02 -0.12 16 47 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 48 H 0.07 -0.47 8.14 -2.39 -0.02 -0.48 16 Total: 0.00 -24.47 414.48 3.15 -21.33 By element: Atomic # 1 Polarization: -11.80 SS G_CDS: 0.40 Total: -11.40 kcal Atomic # 6 Polarization: 3.89 SS G_CDS: 3.51 Total: 7.40 kcal Atomic # 8 Polarization: -11.02 SS G_CDS: -2.12 Total: -13.14 kcal Atomic # 14 Polarization: -5.51 SS G_CDS: 2.05 Total: -3.47 kcal Atomic # 35 Polarization: -0.03 SS G_CDS: -0.69 Total: -0.71 kcal Total: -24.47 3.15 -21.33 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_11733144_484008.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -117.725 kcal (2) G-P(sol) polarization free energy of solvation -24.474 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -142.198 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.147 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.327 kcal (6) G-S(sol) free energy of system = (1) + (5) -139.052 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.44 seconds