Wall clock time and date at job start Sat Mar 6 2021 00:43:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86299 * 109.47025 * 2 1 4 4 C 1.50695 * 109.47008 * 120.00006 * 2 1 3 5 5 C 1.38430 * 119.82430 * 64.99709 * 4 2 1 6 6 C 1.37885 * 120.22517 * 179.97438 * 5 4 2 7 7 C 1.39678 * 119.87205 * 0.02562 * 6 5 4 8 8 C 1.47567 * 120.17177 * 179.97438 * 7 6 5 9 9 O 1.21489 * 119.99809 * 180.02562 * 8 7 6 10 10 O 1.34726 * 119.99902 * 0.02562 * 8 7 6 11 11 C 1.45202 * 116.99906 * 179.97438 * 10 8 7 12 12 C 1.53000 * 109.47059 * 180.02562 * 11 10 8 13 13 H 1.09001 * 109.46972 * 305.00097 * 12 11 10 14 14 C 1.53000 * 109.47517 * 64.99653 * 12 11 10 15 15 C 1.52991 * 109.47461 * 179.97438 * 14 12 11 16 16 C 1.53006 * 109.47187 * 300.00531 * 15 14 12 17 17 H 1.09005 * 109.46532 * 299.99550 * 16 15 14 18 18 O 1.42905 * 109.47059 * 179.97438 * 16 15 14 19 19 C 1.52995 * 109.47397 * 59.99755 * 16 15 14 20 20 C 1.52996 * 109.47031 * 185.00164 * 12 11 10 21 21 C 1.39922 * 119.65479 * 0.02562 * 7 6 5 22 22 F 1.35095 * 120.10890 * 180.02562 * 21 7 6 23 23 C 1.38251 * 119.82470 * 244.98019 * 4 2 1 24 24 H 0.96709 * 113.99778 * 59.99985 * 1 2 3 25 25 H 1.09004 * 109.46801 * 239.99863 * 2 1 3 26 26 H 1.48497 * 109.99910 * 298.67991 * 3 2 1 27 27 H 1.48497 * 109.99749 * 60.00084 * 3 2 1 28 28 H 1.08003 * 119.89123 * 359.96258 * 5 4 2 29 29 H 1.08005 * 120.06322 * 179.72532 * 6 5 4 30 30 H 1.08999 * 109.47070 * 299.99888 * 11 10 8 31 31 H 1.08993 * 109.46888 * 59.99700 * 11 10 8 32 32 H 1.09004 * 109.47358 * 300.00712 * 14 12 11 33 33 H 1.09001 * 109.46637 * 60.00239 * 14 12 11 34 34 H 1.08998 * 109.47837 * 180.02562 * 15 14 12 35 35 H 1.08997 * 109.47166 * 60.00104 * 15 14 12 36 36 H 0.96701 * 113.99865 * 59.99421 * 18 16 15 37 37 H 1.08994 * 109.47227 * 180.02562 * 19 16 15 38 38 H 1.09001 * 109.46903 * 59.99865 * 19 16 15 39 39 H 1.09009 * 109.47002 * 299.99504 * 20 12 11 40 40 H 1.08996 * 109.47649 * 59.99632 * 20 12 11 41 41 H 1.07990 * 119.93953 * 359.97438 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.6822 -2.0621 1.3949 6 6 2.1384 -2.7205 2.5172 7 6 2.8538 -2.0207 3.4916 8 6 3.3446 -2.7185 4.6957 9 8 3.9661 -2.1067 5.5414 10 8 3.1035 -4.0342 4.8570 11 6 3.6166 -4.6551 6.0651 12 6 3.2478 -6.1400 6.0715 13 1 2.1697 -6.2472 5.9518 14 6 3.9616 -6.8478 4.9180 15 6 3.5934 -8.3327 4.9248 16 6 4.0246 -8.9591 6.2525 17 1 5.1027 -8.8515 6.3718 18 8 3.6801 -10.3460 6.2590 19 6 3.3107 -8.2514 7.4059 20 6 3.6785 -6.7667 7.3991 21 6 3.1017 -0.6542 3.3206 22 9 3.7931 0.0315 4.2570 23 6 2.6387 -0.0087 2.1888 24 1 -0.3933 0.4417 -0.7651 25 1 1.7923 -0.5139 -0.8900 26 1 1.5879 2.4585 -1.2242 27 1 1.5614 2.4678 1.2085 28 1 1.1285 -2.6029 0.6416 29 1 1.9387 -3.7742 2.6450 30 1 4.7011 -4.5503 6.0950 31 1 3.1803 -4.1682 6.9372 32 1 3.6549 -6.4012 3.9721 33 1 5.0398 -6.7406 5.0376 34 1 4.1023 -8.8371 4.1033 35 1 2.5154 -8.4403 4.8055 36 1 4.0974 -10.8582 5.5529 37 1 3.6182 -8.6973 8.3518 38 1 2.2326 -8.3589 7.2865 39 1 4.7567 -6.6596 7.5186 40 1 3.1699 -6.2625 8.2208 41 1 2.8299 1.0454 2.0535 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_11946254_16737258.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 00:43:24 Heat of formation + Delta-G solvation = -193.972858 kcal Electronic energy + Delta-G solvation = -25534.022640 eV Core-core repulsion = 21487.564086 eV Total energy + Delta-G solvation = -4046.458555 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 311.130 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -49.96053 -41.60604 -40.46259 -39.95995 -37.91953 -37.58971 -36.53706 -33.50328 -31.91486 -31.88354 -31.82937 -28.16760 -26.53925 -24.16542 -23.98813 -23.71625 -22.36901 -21.88282 -20.95392 -19.25176 -18.78111 -18.34824 -18.20466 -17.94262 -17.55330 -17.27786 -16.67112 -16.51602 -16.20187 -15.98868 -15.56129 -15.44277 -15.24362 -14.98044 -14.60433 -14.39274 -14.13424 -13.98650 -13.70264 -13.61441 -13.38752 -13.29685 -13.16152 -13.02058 -12.58325 -12.37259 -12.20963 -11.97429 -11.91732 -11.75204 -11.56886 -11.42497 -11.17297 -10.76277 -10.74469 -10.36587 -9.94632 -5.10914 -0.68169 -0.04757 1.06064 1.36642 1.44707 1.47687 1.81195 2.33460 2.80953 3.10304 3.13448 3.36938 3.49891 3.53251 3.55350 3.66230 3.73178 3.88512 3.90744 4.00015 4.10138 4.17076 4.20788 4.27898 4.30018 4.38597 4.41740 4.42679 4.51026 4.69308 4.71413 4.78789 4.86810 4.87258 4.97823 4.99666 5.07715 5.08204 5.10889 5.23242 5.30383 5.39888 5.50649 6.22035 6.67717 6.69390 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.081 4.081 3 Si 0.681 3.319 4 C -0.007 4.007 5 C -0.117 4.117 6 C -0.031 4.031 7 C -0.161 4.161 8 C 0.509 3.491 9 O -0.490 6.490 10 O -0.349 6.349 11 C 0.073 3.927 12 C -0.089 4.089 13 H 0.086 0.914 14 C -0.112 4.112 15 C -0.152 4.152 16 C 0.102 3.898 17 H 0.055 0.945 18 O -0.569 6.569 19 C -0.111 4.111 20 C -0.111 4.111 21 C 0.173 3.827 22 F -0.109 7.109 23 C -0.165 4.165 24 H 0.385 0.615 25 H 0.088 0.912 26 H -0.255 1.255 27 H -0.251 1.251 28 H 0.143 0.857 29 H 0.152 0.848 30 H 0.074 0.926 31 H 0.075 0.925 32 H 0.074 0.926 33 H 0.065 0.935 34 H 0.067 0.933 35 H 0.072 0.928 36 H 0.379 0.621 37 H 0.074 0.926 38 H 0.072 0.928 39 H 0.070 0.930 40 H 0.075 0.925 41 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.857 -1.548 -5.496 5.774 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.191 4.191 3 Si 0.581 3.419 4 C -0.008 4.008 5 C -0.135 4.135 6 C -0.049 4.049 7 C -0.163 4.163 8 C 0.352 3.648 9 O -0.378 6.378 10 O -0.266 6.266 11 C -0.001 4.001 12 C -0.107 4.107 13 H 0.105 0.895 14 C -0.150 4.150 15 C -0.190 4.190 16 C 0.043 3.957 17 H 0.073 0.927 18 O -0.375 6.375 19 C -0.149 4.149 20 C -0.148 4.148 21 C 0.153 3.847 22 F -0.087 7.087 23 C -0.183 4.183 24 H 0.234 0.766 25 H 0.105 0.895 26 H -0.180 1.180 27 H -0.176 1.176 28 H 0.161 0.839 29 H 0.170 0.830 30 H 0.093 0.907 31 H 0.093 0.907 32 H 0.093 0.907 33 H 0.083 0.917 34 H 0.085 0.915 35 H 0.091 0.909 36 H 0.226 0.774 37 H 0.092 0.908 38 H 0.091 0.909 39 H 0.089 0.911 40 H 0.094 0.906 41 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 0.610 -0.645 -4.090 4.185 hybrid contribution -0.570 -0.116 -0.754 0.952 sum 0.040 -0.762 -4.843 4.903 Atomic orbital electron populations 1.86579 1.17020 1.80322 1.50131 1.24833 0.85131 1.11340 0.97765 0.94946 0.91638 0.74371 0.80908 1.19341 0.93899 0.93853 0.93663 1.21092 1.00193 0.93702 0.98489 1.21440 0.91737 1.00761 0.90953 1.19216 1.07974 0.92451 0.96642 1.20759 0.77355 0.80911 0.85736 1.90932 1.37095 1.66920 1.42855 1.86483 1.72558 1.23304 1.44261 1.23212 0.99625 0.92645 0.84617 1.21276 1.02081 0.91191 0.96176 0.89520 1.21535 1.00358 0.94416 0.98667 1.22275 1.02681 0.96185 0.97811 1.21854 0.97886 0.81090 0.94823 0.92688 1.86523 1.74396 1.20035 1.56541 1.21430 1.01390 0.93854 0.98182 1.21470 1.02128 0.94966 0.96270 1.17476 0.92130 0.88165 0.86913 1.91637 1.75522 1.78744 1.62835 1.20954 1.02723 1.01208 0.93464 0.76624 0.89459 1.17985 1.17565 0.83941 0.83024 0.90731 0.90694 0.90695 0.91657 0.91478 0.90894 0.77388 0.90762 0.90907 0.91136 0.90622 0.83311 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.43 12.81 -35.23 -0.45 -0.02 16 2 C -0.08 0.17 2.79 36.00 0.10 0.27 16 3 Si 0.68 -1.45 29.83 -169.99 -5.07 -6.52 16 4 C -0.01 0.00 5.39 -104.55 -0.56 -0.56 16 5 C -0.12 0.12 9.66 -39.64 -0.38 -0.26 16 6 C -0.03 0.02 9.62 -39.17 -0.38 -0.36 16 7 C -0.16 -0.31 5.88 -104.92 -0.62 -0.92 16 8 C 0.51 1.73 7.89 34.54 0.27 2.00 16 9 O -0.49 -3.14 15.13 -19.26 -0.29 -3.43 16 10 O -0.35 -0.50 9.01 -40.56 -0.37 -0.86 16 11 C 0.07 0.01 4.85 37.16 0.18 0.20 16 12 C -0.09 0.11 2.43 -90.62 -0.22 -0.11 16 13 H 0.09 -0.09 8.14 -51.93 -0.42 -0.51 16 14 C -0.11 0.17 5.10 -26.74 -0.14 0.03 16 15 C -0.15 0.22 5.54 -26.73 -0.15 0.07 16 16 C 0.10 -0.05 3.47 -26.73 -0.09 -0.14 16 17 H 0.06 -0.05 8.14 -51.93 -0.42 -0.48 16 18 O -0.57 -0.47 13.32 -35.23 -0.47 -0.94 16 19 C -0.11 0.05 5.57 -26.76 -0.15 -0.10 16 20 C -0.11 0.18 5.20 -26.76 -0.14 0.04 16 21 C 0.17 0.42 7.29 -38.94 -0.28 0.13 16 22 F -0.11 -0.50 15.55 2.25 0.04 -0.46 16 23 C -0.17 -0.06 8.63 -39.56 -0.34 -0.40 16 24 H 0.39 -1.81 8.74 45.56 0.40 -1.41 16 25 H 0.09 -0.37 7.96 -51.93 -0.41 -0.78 16 26 H -0.26 0.06 7.11 56.52 0.40 0.46 16 27 H -0.25 -0.31 7.04 56.52 0.40 0.09 16 28 H 0.14 -0.39 8.06 -52.48 -0.42 -0.81 16 29 H 0.15 -0.37 7.61 -52.48 -0.40 -0.77 16 30 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 31 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 32 H 0.07 -0.10 7.82 -51.93 -0.41 -0.50 16 33 H 0.06 -0.10 8.14 -51.93 -0.42 -0.52 16 34 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 35 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 36 H 0.38 -1.15 9.08 45.56 0.41 -0.74 16 37 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 38 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 39 H 0.07 -0.13 8.14 -51.92 -0.42 -0.55 16 40 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 41 H 0.15 -0.17 4.84 -52.49 -0.25 -0.42 16 LS Contribution 342.79 15.07 5.17 5.17 Total: 0.00 -8.11 342.79 -9.28 -17.39 By element: Atomic # 1 Polarization: -5.26 SS G_CDS: -4.93 Total: -10.19 kcal Atomic # 6 Polarization: 2.78 SS G_CDS: -2.90 Total: -0.12 kcal Atomic # 8 Polarization: -3.68 SS G_CDS: -1.58 Total: -5.26 kcal Atomic # 9 Polarization: -0.50 SS G_CDS: 0.04 Total: -0.46 kcal Atomic # 14 Polarization: -1.45 SS G_CDS: -5.07 Total: -6.52 kcal Total LS contribution 5.17 Total: 5.17 kcal Total: -8.11 -9.28 -17.39 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_11946254_16737258.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -176.586 kcal (2) G-P(sol) polarization free energy of solvation -8.106 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -184.692 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.281 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.387 kcal (6) G-S(sol) free energy of system = (1) + (5) -193.973 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds