Wall clock time and date at job start Sat Mar 6 2021 00:34:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86295 * 109.47388 * 2 1 4 4 C 1.50704 * 109.46518 * 119.99948 * 2 1 3 5 5 C 1.35188 * 125.47900 * 64.97747 * 4 2 1 6 6 C 1.40278 * 107.20786 * 179.75610 * 5 4 2 7 7 C 1.37999 * 106.52619 * 0.37682 * 6 5 4 8 8 C 1.41533 * 126.10608 * 179.87975 * 7 6 5 9 9 C 1.35754 * 119.99926 * 179.71378 * 8 7 6 10 10 C 1.41292 * 120.00084 * 180.02562 * 9 8 7 11 11 O 1.21710 * 119.99933 * 0.02562 * 10 9 8 12 12 O 1.35002 * 119.99962 * 180.02562 * 10 9 8 13 13 C 1.42904 * 116.99692 * 180.02562 * 12 10 9 14 14 C 1.50699 * 109.46824 * 180.02562 * 13 12 10 15 15 O 1.20760 * 120.00153 * 359.97438 * 14 13 12 16 16 C 1.50699 * 120.00155 * 180.02562 * 14 13 12 17 17 H 1.09005 * 109.46677 * 314.06279 * 16 14 13 18 18 C 1.52998 * 109.47242 * 74.06071 * 16 14 13 19 19 C 1.53007 * 109.46993 * 60.00060 * 18 16 14 20 20 C 1.53004 * 109.46631 * 60.00076 * 19 18 16 21 21 H 1.09005 * 109.47057 * 60.00090 * 20 19 18 22 22 C 1.53003 * 109.46750 * 179.97438 * 20 19 18 23 23 F 1.39898 * 109.46706 * 179.97438 * 22 20 19 24 24 F 1.39895 * 109.47222 * 300.00166 * 22 20 19 25 25 F 1.39903 * 109.46733 * 60.00151 * 22 20 19 26 26 C 1.52994 * 109.47494 * 300.00028 * 20 19 18 27 27 C 1.52994 * 109.47481 * 194.06592 * 16 14 13 28 28 O 1.34005 * 125.47941 * 244.96780 * 4 2 1 29 29 H 0.96708 * 113.99992 * 300.00545 * 1 2 3 30 30 H 1.09001 * 109.46766 * 239.99490 * 2 1 3 31 31 H 1.48501 * 110.00061 * 299.99720 * 3 2 1 32 32 H 1.48502 * 110.00085 * 61.31687 * 3 2 1 33 33 H 1.08000 * 126.39537 * 0.02617 * 5 4 2 34 34 H 1.08005 * 126.73920 * 180.23726 * 6 5 4 35 35 H 1.07995 * 120.00255 * 359.71660 * 8 7 6 36 36 H 1.08003 * 120.00091 * 0.02562 * 9 8 7 37 37 H 1.08995 * 109.46974 * 299.99941 * 13 12 10 38 38 H 1.08998 * 109.47150 * 60.00103 * 13 12 10 39 39 H 1.08995 * 109.47301 * 180.02562 * 18 16 14 40 40 H 1.09000 * 109.47165 * 300.00293 * 18 16 14 41 41 H 1.08995 * 109.47292 * 300.00244 * 19 18 16 42 42 H 1.09001 * 109.46752 * 179.97438 * 19 18 16 43 43 H 1.09007 * 109.46718 * 300.00532 * 26 20 19 44 44 H 1.09000 * 109.47288 * 180.02562 * 26 20 19 45 45 H 1.08996 * 109.47372 * 59.99627 * 27 16 14 46 46 H 1.08995 * 109.47208 * 179.97438 * 27 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 1.7536 -2.0218 1.5068 6 6 2.3778 -2.2749 2.7374 7 6 2.9092 -1.0743 3.1622 8 6 3.6284 -0.8585 4.3620 9 6 4.1030 0.3790 4.6556 10 6 4.8214 0.5943 5.8531 11 8 5.0152 -0.3298 6.6210 12 8 5.2929 1.8251 6.1454 13 6 6.0108 1.9702 7.3724 14 6 6.4558 3.4016 7.5277 15 8 6.1865 4.2135 6.6753 16 6 7.2380 3.8196 8.7461 17 1 6.7665 3.4089 9.6390 18 6 8.6705 3.2933 8.6379 19 6 9.3323 3.8696 7.3845 20 6 9.3556 5.3967 7.4766 21 1 9.9213 5.6990 8.3579 22 6 10.0179 5.9731 6.2235 23 9 10.0387 7.3694 6.3075 24 9 11.3278 5.4918 6.1251 25 9 9.2922 5.5851 5.0921 26 6 7.9231 5.9231 7.5849 27 6 7.2613 5.3466 8.8382 28 8 2.6257 -0.1439 2.2267 29 1 -0.3933 0.4418 0.7651 30 1 1.7923 -0.5139 -0.8900 31 1 1.5616 2.4678 -1.2085 32 1 1.5879 2.4585 1.2242 33 1 1.2327 -2.7413 0.8926 34 1 2.4300 -3.2228 3.2524 35 1 3.7997 -1.6783 5.0438 36 1 3.9314 1.1990 3.9740 37 1 5.3635 1.6989 8.2063 38 1 6.8834 1.3171 7.3623 39 1 9.2361 3.5952 9.5193 40 1 8.6539 2.2053 8.5723 41 1 8.7666 3.5674 6.5032 42 1 10.3530 3.4950 7.3077 43 1 7.3574 5.6207 6.7035 44 1 7.9397 7.0110 7.6500 45 1 6.2408 5.7216 8.9153 46 1 7.8266 5.6488 9.7197 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_11946942_12428076.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 00:34:48 Heat of formation + Delta-G solvation = -269.769423 kcal Electronic energy + Delta-G solvation = -36016.184796 eV Core-core repulsion = 30425.085553 eV Total energy + Delta-G solvation = -5591.099243 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 389.126 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -50.97936 -48.47316 -48.42439 -43.84795 -42.08995 -41.27355 -38.58907 -38.26447 -37.62501 -35.46633 -34.25423 -33.64226 -32.19424 -31.44151 -30.19542 -27.79125 -26.79064 -24.78380 -24.08067 -23.62981 -23.17000 -22.18306 -21.93535 -20.83279 -20.14238 -19.31322 -19.15953 -19.12649 -18.68934 -18.56561 -17.97283 -17.84813 -17.64868 -17.32783 -16.83114 -16.70064 -16.18913 -15.93547 -15.91733 -15.56485 -15.42904 -15.22443 -14.97889 -14.82698 -14.64837 -14.60550 -14.50814 -14.47117 -14.29225 -14.14776 -14.08795 -13.97544 -13.68919 -13.65826 -13.46516 -13.44199 -13.27784 -12.98583 -12.92264 -12.35659 -12.22396 -12.09920 -11.92058 -11.85232 -11.75021 -11.56300 -11.47761 -11.07544 -10.85013 -10.36695 -9.19423 -5.03149 -0.94512 0.70888 0.74966 1.04568 1.39571 1.41087 1.46585 1.66081 1.84072 1.88101 2.06531 2.72997 2.86546 2.96621 3.06102 3.08540 3.39681 3.40489 3.47804 3.64995 3.67630 3.74143 3.79152 3.89494 3.91361 3.96256 3.98901 4.02476 4.05074 4.10005 4.20081 4.22776 4.27708 4.44276 4.45188 4.56249 4.61121 4.65341 4.72140 4.75199 4.84603 4.86375 4.94616 4.96857 4.99896 5.23961 5.25748 5.28076 5.80673 6.13845 6.33276 6.65659 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.519 6.519 2 C -0.038 4.038 3 Si 0.698 3.302 4 C -0.025 4.025 5 C -0.181 4.181 6 C -0.145 4.145 7 C -0.016 4.016 8 C 0.039 3.961 9 C -0.202 4.202 10 C 0.505 3.495 11 O -0.512 6.512 12 O -0.332 6.332 13 C 0.014 3.986 14 C 0.359 3.641 15 O -0.413 6.413 16 C -0.133 4.133 17 H 0.111 0.889 18 C -0.105 4.105 19 C -0.128 4.128 20 C -0.130 4.130 21 H 0.114 0.886 22 C 0.452 3.548 23 F -0.183 7.183 24 F -0.185 7.185 25 F -0.180 7.180 26 C -0.145 4.145 27 C -0.099 4.099 28 O -0.156 6.156 29 H 0.381 0.619 30 H 0.140 0.860 31 H -0.246 1.246 32 H -0.253 1.253 33 H 0.159 0.841 34 H 0.163 0.837 35 H 0.166 0.834 36 H 0.146 0.854 37 H 0.104 0.896 38 H 0.104 0.896 39 H 0.087 0.913 40 H 0.081 0.919 41 H 0.076 0.924 42 H 0.084 0.916 43 H 0.113 0.887 44 H 0.076 0.924 45 H 0.077 0.923 46 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.381 -2.989 3.094 4.319 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.326 6.326 2 C -0.147 4.147 3 Si 0.596 3.404 4 C -0.076 4.076 5 C -0.200 4.200 6 C -0.164 4.164 7 C -0.065 4.065 8 C 0.021 3.979 9 C -0.221 4.221 10 C 0.354 3.646 11 O -0.403 6.403 12 O -0.248 6.248 13 C -0.062 4.062 14 C 0.231 3.769 15 O -0.283 6.283 16 C -0.152 4.152 17 H 0.129 0.871 18 C -0.142 4.142 19 C -0.166 4.166 20 C -0.149 4.149 21 H 0.132 0.868 22 C 0.398 3.602 23 F -0.165 7.165 24 F -0.166 7.166 25 F -0.161 7.161 26 C -0.182 4.182 27 C -0.137 4.137 28 O -0.053 6.053 29 H 0.230 0.770 30 H 0.158 0.842 31 H -0.170 1.170 32 H -0.177 1.177 33 H 0.177 0.823 34 H 0.180 0.820 35 H 0.183 0.817 36 H 0.164 0.836 37 H 0.122 0.878 38 H 0.122 0.878 39 H 0.106 0.894 40 H 0.099 0.901 41 H 0.094 0.906 42 H 0.103 0.897 43 H 0.131 0.869 44 H 0.095 0.905 45 H 0.095 0.905 46 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 0.280 -1.922 2.307 3.015 hybrid contribution -0.819 -0.472 0.593 1.116 sum -0.539 -2.394 2.900 3.799 Atomic orbital electron populations 1.86679 1.16462 1.80153 1.49291 1.24438 0.84164 1.12334 0.93796 0.94397 0.91473 0.73157 0.81339 1.23178 0.98874 0.93784 0.91801 1.21624 1.04359 0.95687 0.98350 1.22523 0.99118 0.98205 0.96576 1.19695 1.06571 0.87865 0.92357 1.20770 0.88809 0.97791 0.90579 1.21277 1.03866 0.99431 0.97491 1.19786 0.77533 0.80446 0.86879 1.90935 1.56053 1.42902 1.50441 1.86317 1.65856 1.32816 1.39786 1.23110 0.98284 0.98021 0.86749 1.24498 0.76967 0.88306 0.87093 1.90347 1.44365 1.52931 1.40638 1.21738 0.97088 0.98624 0.97756 0.87130 1.21483 0.92978 1.01053 0.98718 1.21714 1.03073 0.92201 0.99604 1.22494 0.99649 0.98087 0.94683 0.86802 1.20622 0.76841 0.76142 0.86579 1.93185 1.96352 1.30496 1.96449 1.93182 1.38797 1.87930 1.96735 1.93198 1.77390 1.90729 1.54781 1.22088 0.92668 1.01251 1.02154 1.21367 1.02158 0.92061 0.98074 1.84012 1.57027 1.37924 1.26342 0.77009 0.84204 1.17032 1.17732 0.82341 0.81978 0.81706 0.83619 0.87788 0.87792 0.89440 0.90053 0.90571 0.89696 0.86947 0.90517 0.90454 0.90391 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.06 12.88 -35.23 -0.45 -0.39 16 2 C -0.04 0.05 2.98 36.01 0.11 0.16 16 3 Si 0.70 -0.79 32.10 -169.99 -5.46 -6.25 16 4 C -0.02 0.01 6.20 -35.39 -0.22 -0.21 16 5 C -0.18 0.08 10.76 -39.90 -0.43 -0.35 16 6 C -0.15 0.12 10.90 -38.90 -0.42 -0.31 16 7 C -0.02 0.00 6.84 -38.41 -0.26 -0.26 16 8 C 0.04 -0.02 9.39 -39.22 -0.37 -0.39 16 9 C -0.20 -0.09 9.55 -39.31 -0.38 -0.47 16 10 C 0.51 0.96 7.68 31.89 0.24 1.21 16 11 O -0.51 -1.77 15.88 -19.43 -0.31 -2.08 16 12 O -0.33 -0.65 9.64 -48.10 -0.46 -1.11 16 13 C 0.01 -0.01 5.77 36.01 0.21 0.20 16 14 C 0.36 -0.27 5.11 -29.04 -0.15 -0.42 16 15 O -0.41 -1.08 13.37 -13.96 -0.19 -1.27 16 16 C -0.13 0.46 2.94 -91.78 -0.27 0.19 16 17 H 0.11 -0.62 8.14 -51.93 -0.42 -1.05 16 18 C -0.10 0.44 5.42 -26.73 -0.14 0.29 16 19 C -0.13 0.26 4.74 -26.73 -0.13 0.13 16 20 C -0.13 0.14 2.16 -90.62 -0.20 -0.05 16 21 H 0.11 -0.32 8.14 -51.93 -0.42 -0.74 16 22 C 0.45 0.72 2.69 37.16 0.10 0.82 16 23 F -0.18 -0.49 16.80 2.25 0.04 -0.45 16 24 F -0.19 -0.41 16.80 2.25 0.04 -0.37 16 25 F -0.18 -0.59 16.28 2.25 0.04 -0.55 16 26 C -0.14 0.09 4.67 -26.73 -0.12 -0.04 16 27 C -0.10 0.26 5.22 -26.73 -0.14 0.12 16 28 O -0.16 -0.09 8.56 4.70 0.04 -0.05 16 29 H 0.38 -1.06 8.70 45.56 0.40 -0.67 16 30 H 0.14 -0.40 7.96 -51.93 -0.41 -0.81 16 31 H -0.25 -0.35 7.11 56.52 0.40 0.05 16 32 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 33 H 0.16 -0.26 8.06 -52.49 -0.42 -0.68 16 34 H 0.16 -0.49 8.06 -52.48 -0.42 -0.92 16 35 H 0.17 -0.28 7.46 -52.49 -0.39 -0.68 16 36 H 0.15 -0.01 7.72 -52.48 -0.41 -0.42 16 37 H 0.10 -0.25 8.13 -51.93 -0.42 -0.67 16 38 H 0.10 -0.25 7.83 -51.93 -0.41 -0.65 16 39 H 0.09 -0.46 8.14 -51.93 -0.42 -0.88 16 40 H 0.08 -0.42 7.84 -51.93 -0.41 -0.83 16 41 H 0.08 -0.03 6.85 -51.93 -0.36 -0.39 16 42 H 0.08 -0.20 7.80 -51.93 -0.41 -0.61 16 43 H 0.11 0.19 4.73 -51.93 -0.25 -0.05 16 44 H 0.08 -0.04 7.80 -51.93 -0.41 -0.44 16 45 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 46 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 LS Contribution 399.18 15.07 6.02 6.02 Total: 0.00 -8.76 399.18 -8.89 -17.64 By element: Atomic # 1 Polarization: -6.12 SS G_CDS: -5.62 Total: -11.74 kcal Atomic # 6 Polarization: 3.18 SS G_CDS: -2.57 Total: 0.61 kcal Atomic # 8 Polarization: -3.53 SS G_CDS: -1.37 Total: -4.91 kcal Atomic # 9 Polarization: -1.49 SS G_CDS: 0.11 Total: -1.38 kcal Atomic # 14 Polarization: -0.79 SS G_CDS: -5.46 Total: -6.25 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -8.76 -8.89 -17.64 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_11946942_12428076.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -252.125 kcal (2) G-P(sol) polarization free energy of solvation -8.757 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -260.882 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.887 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.644 kcal (6) G-S(sol) free energy of system = (1) + (5) -269.769 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds