Wall clock time and date at job start Sat Mar 6 2021 02:33:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86295 * 109.47211 * 2 1 4 4 C 1.50697 * 109.46999 * 119.99994 * 2 1 3 5 5 C 1.35186 * 125.47922 * 64.99710 * 4 2 1 6 6 C 1.40283 * 107.21046 * 179.97438 * 5 4 2 7 7 C 1.38007 * 106.52441 * 0.02562 * 6 5 4 8 8 C 1.41533 * 126.10480 * 179.97438 * 7 6 5 9 9 C 1.35755 * 119.99797 * 180.02562 * 8 7 6 10 10 C 1.41288 * 119.99936 * 179.72294 * 9 8 7 11 11 O 1.21713 * 120.00297 * 0.02562 * 10 9 8 12 12 O 1.34994 * 119.99946 * 179.97438 * 10 9 8 13 13 C 1.42905 * 117.00097 * 180.02562 * 12 10 9 14 14 C 1.52993 * 109.47105 * 180.02562 * 13 12 10 15 15 H 1.09001 * 109.47201 * 304.99637 * 14 13 12 16 16 C 1.52995 * 109.47445 * 64.99751 * 14 13 12 17 17 C 1.53003 * 109.47087 * 180.02562 * 16 14 13 18 18 C 1.53007 * 109.46895 * 299.99776 * 17 16 14 19 19 H 1.08999 * 109.47476 * 299.99908 * 18 17 16 20 20 O 1.42902 * 109.46984 * 180.02562 * 18 17 16 21 21 C 1.52995 * 109.47070 * 60.00214 * 18 17 16 22 22 C 1.52992 * 109.47285 * 300.00154 * 21 18 17 23 23 O 1.34007 * 125.48196 * 245.28396 * 4 2 1 24 24 H 0.96700 * 113.99893 * 300.00116 * 1 2 3 25 25 H 1.09001 * 109.46571 * 239.99833 * 2 1 3 26 26 H 1.48503 * 109.99984 * 300.00048 * 3 2 1 27 27 H 1.48497 * 110.00070 * 61.31990 * 3 2 1 28 28 H 1.07996 * 126.39176 * 359.97438 * 5 4 2 29 29 H 1.07999 * 126.73634 * 180.02562 * 6 5 4 30 30 H 1.07997 * 119.99836 * 359.72500 * 8 7 6 31 31 H 1.08000 * 119.99581 * 359.72186 * 9 8 7 32 32 H 1.08997 * 109.46716 * 299.99888 * 13 12 10 33 33 H 1.08994 * 109.46885 * 59.99712 * 13 12 10 34 34 H 1.08996 * 109.47190 * 300.00182 * 16 14 13 35 35 H 1.08999 * 109.47221 * 60.00261 * 16 14 13 36 36 H 1.09005 * 109.47102 * 180.02562 * 17 16 14 37 37 H 1.08994 * 109.47633 * 60.00245 * 17 16 14 38 38 H 0.96706 * 113.99769 * 59.99816 * 20 18 17 39 39 H 1.08996 * 109.47190 * 179.97438 * 21 18 17 40 40 H 1.09001 * 109.47014 * 60.00028 * 21 18 17 41 41 H 1.09001 * 109.46991 * 299.99887 * 22 21 18 42 42 H 1.08996 * 109.47455 * 180.02562 * 22 21 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.7542 -2.0218 1.5066 6 6 2.3739 -2.2738 2.7396 7 6 2.9094 -1.0741 3.1622 8 6 3.6279 -0.8582 4.3623 9 6 4.1013 0.3796 4.6566 10 6 4.8135 0.5965 5.8574 11 8 5.0030 -0.3265 6.6278 12 8 5.2847 1.8273 6.1498 13 6 5.9962 1.9742 7.3804 14 6 6.4487 3.4272 7.5376 15 1 7.0275 3.7241 6.6629 16 6 5.2221 4.3321 7.6687 17 6 5.6747 5.7852 7.8252 18 6 6.5421 5.9170 9.0788 19 1 5.9636 5.6204 9.9537 20 8 6.9643 7.2743 9.2254 21 6 7.7687 5.0120 8.9477 22 6 7.3161 3.5590 8.7910 23 8 2.6208 -0.1426 2.2295 24 1 -0.3933 0.4417 0.7650 25 1 1.7923 -0.5139 -0.8900 26 1 1.5615 2.4678 -1.2085 27 1 1.5880 2.4585 1.2242 28 1 1.2328 -2.7412 0.8925 29 1 2.4225 -3.2208 3.2566 30 1 3.7953 -1.6771 5.0462 31 1 3.9335 1.1985 3.9727 32 1 5.3441 1.7052 8.2113 33 1 6.8680 1.3201 7.3763 34 1 4.6044 4.2385 6.7755 35 1 4.6434 4.0352 8.5434 36 1 4.8008 6.4299 7.9191 37 1 6.2531 6.0819 6.9504 38 1 6.2368 7.9051 9.3141 39 1 8.3868 5.1062 9.8405 40 1 8.3472 5.3087 8.0728 41 1 6.7377 3.2623 9.6659 42 1 8.1900 2.9143 8.6981 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_11946942_16737258.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 02:33:42 Heat of formation + Delta-G solvation = -145.309049 kcal Electronic energy + Delta-G solvation = -24656.984047 eV Core-core repulsion = 20763.407497 eV Total energy + Delta-G solvation = -3893.576550 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 309.139 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -43.84340 -41.62543 -40.09712 -38.30142 -37.94968 -36.54940 -35.42405 -34.24768 -32.06058 -31.88439 -31.14967 -28.09966 -26.47511 -24.47720 -23.82994 -23.16699 -22.35816 -21.89309 -21.00194 -20.56379 -19.21701 -18.62263 -18.20708 -17.68858 -17.57451 -17.49446 -17.26261 -16.51017 -16.18886 -15.92786 -15.55777 -15.42489 -15.00904 -14.49229 -14.47178 -14.20293 -14.08425 -13.98273 -13.72324 -13.65871 -13.38665 -13.27324 -13.09300 -12.97899 -12.56345 -12.18702 -12.12586 -11.91709 -11.86648 -11.71748 -11.53987 -11.43214 -11.14290 -11.07150 -10.85983 -10.74037 -9.17970 -5.06380 -0.90770 0.77017 1.02625 1.39636 1.43488 1.63644 1.79422 1.85445 2.12744 3.04864 3.13417 3.38105 3.56024 3.58941 3.69387 3.73229 3.77863 3.97047 4.03148 4.03607 4.15046 4.21322 4.23368 4.30842 4.35836 4.41157 4.45946 4.46002 4.54473 4.60065 4.74255 4.75071 4.86827 4.89737 4.99415 5.02052 5.04361 5.10758 5.11028 5.26337 5.26929 5.35409 5.49248 5.81004 6.12658 6.69091 6.78506 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.519 6.519 2 C -0.038 4.038 3 Si 0.699 3.301 4 C -0.027 4.027 5 C -0.180 4.180 6 C -0.147 4.147 7 C -0.014 4.014 8 C 0.034 3.966 9 C -0.199 4.199 10 C 0.502 3.498 11 O -0.513 6.513 12 O -0.347 6.347 13 C 0.070 3.930 14 C -0.089 4.089 15 H 0.086 0.914 16 C -0.112 4.112 17 C -0.152 4.152 18 C 0.102 3.898 19 H 0.055 0.945 20 O -0.569 6.569 21 C -0.111 4.111 22 C -0.110 4.110 23 O -0.157 6.157 24 H 0.381 0.619 25 H 0.140 0.860 26 H -0.247 1.247 27 H -0.254 1.254 28 H 0.159 0.841 29 H 0.162 0.838 30 H 0.165 0.835 31 H 0.144 0.856 32 H 0.069 0.931 33 H 0.071 0.929 34 H 0.074 0.926 35 H 0.064 0.936 36 H 0.066 0.934 37 H 0.073 0.927 38 H 0.379 0.621 39 H 0.073 0.927 40 H 0.072 0.928 41 H 0.069 0.931 42 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.370 -0.135 -1.383 1.438 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.326 6.326 2 C -0.148 4.148 3 Si 0.598 3.402 4 C -0.079 4.079 5 C -0.199 4.199 6 C -0.166 4.166 7 C -0.063 4.063 8 C 0.016 3.984 9 C -0.218 4.218 10 C 0.350 3.650 11 O -0.405 6.405 12 O -0.263 6.263 13 C -0.004 4.004 14 C -0.107 4.107 15 H 0.104 0.896 16 C -0.150 4.150 17 C -0.190 4.190 18 C 0.044 3.956 19 H 0.073 0.927 20 O -0.375 6.375 21 C -0.149 4.149 22 C -0.148 4.148 23 O -0.054 6.054 24 H 0.230 0.770 25 H 0.158 0.842 26 H -0.171 1.171 27 H -0.178 1.178 28 H 0.176 0.824 29 H 0.180 0.820 30 H 0.182 0.818 31 H 0.162 0.838 32 H 0.088 0.912 33 H 0.089 0.911 34 H 0.093 0.907 35 H 0.083 0.917 36 H 0.085 0.915 37 H 0.091 0.909 38 H 0.226 0.774 39 H 0.092 0.908 40 H 0.091 0.909 41 H 0.088 0.912 42 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges 0.251 0.190 -1.703 1.732 hybrid contribution -1.656 -0.286 0.727 1.831 sum -1.405 -0.096 -0.976 1.714 Atomic orbital electron populations 1.86679 1.16488 1.80153 1.49269 1.24439 0.84150 1.12352 0.93819 0.94425 0.91419 0.73155 0.81241 1.23154 0.99226 0.93747 0.91727 1.21622 1.04329 0.95724 0.98260 1.22523 0.99200 0.98288 0.96621 1.19710 1.06325 0.87820 0.92396 1.20770 0.89120 0.97926 0.90610 1.21315 1.03781 0.99252 0.97479 1.19716 0.77591 0.80804 0.86841 1.90931 1.55855 1.43148 1.50523 1.86195 1.66365 1.32499 1.41270 1.22762 0.96020 0.97602 0.84014 1.21270 0.97331 0.92446 0.99655 0.89571 1.21529 0.97006 0.93718 1.02728 1.22278 1.00009 0.97229 0.99441 1.21853 0.95277 0.82333 0.96178 0.92729 1.86520 1.37691 1.17070 1.96226 1.21437 0.96966 0.93069 1.03385 1.21475 0.99725 0.96497 0.97106 1.84000 1.57245 1.37776 1.26365 0.77030 0.84228 1.17074 1.17794 0.82374 0.82012 0.81773 0.83794 0.91222 0.91078 0.90717 0.91741 0.91537 0.90875 0.77399 0.90799 0.90905 0.91213 0.90648 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.16 12.88 -35.23 -0.45 -0.29 16 2 C -0.04 0.06 2.98 36.00 0.11 0.17 16 3 Si 0.70 -1.14 32.10 -169.99 -5.46 -6.60 16 4 C -0.03 0.01 6.20 -35.40 -0.22 -0.21 16 5 C -0.18 0.08 10.76 -39.90 -0.43 -0.35 16 6 C -0.15 0.10 10.90 -38.90 -0.42 -0.32 16 7 C -0.01 0.00 6.84 -38.41 -0.26 -0.26 16 8 C 0.03 -0.01 9.39 -39.22 -0.37 -0.38 16 9 C -0.20 -0.08 9.55 -39.31 -0.38 -0.46 16 10 C 0.50 1.17 7.68 31.89 0.24 1.42 16 11 O -0.51 -2.42 15.88 -19.43 -0.31 -2.73 16 12 O -0.35 -0.59 9.64 -41.30 -0.40 -0.99 16 13 C 0.07 0.03 4.76 37.15 0.18 0.21 16 14 C -0.09 0.07 2.43 -90.62 -0.22 -0.15 16 15 H 0.09 -0.04 8.14 -51.93 -0.42 -0.47 16 16 C -0.11 0.09 5.10 -26.73 -0.14 -0.04 16 17 C -0.15 0.13 5.55 -26.73 -0.15 -0.01 16 18 C 0.10 -0.02 3.47 -26.73 -0.09 -0.11 16 19 H 0.05 -0.03 8.14 -51.93 -0.42 -0.46 16 20 O -0.57 -0.63 13.32 -35.23 -0.47 -1.10 16 21 C -0.11 0.03 5.57 -26.74 -0.15 -0.12 16 22 C -0.11 0.15 5.20 -26.73 -0.14 0.01 16 23 O -0.16 -0.06 8.56 4.71 0.04 -0.02 16 24 H 0.38 -1.14 8.70 45.56 0.40 -0.75 16 25 H 0.14 -0.43 7.96 -51.93 -0.41 -0.84 16 26 H -0.25 -0.23 7.11 56.52 0.40 0.17 16 27 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 28 H 0.16 -0.25 8.06 -52.49 -0.42 -0.68 16 29 H 0.16 -0.45 8.06 -52.49 -0.42 -0.88 16 30 H 0.16 -0.19 7.46 -52.49 -0.39 -0.58 16 31 H 0.14 -0.09 7.72 -52.49 -0.41 -0.50 16 32 H 0.07 0.04 8.13 -51.93 -0.42 -0.38 16 33 H 0.07 0.03 8.13 -51.93 -0.42 -0.39 16 34 H 0.07 -0.02 7.82 -51.93 -0.41 -0.43 16 35 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 36 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 37 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 38 H 0.38 -1.04 9.08 45.56 0.41 -0.62 16 39 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 40 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 41 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 42 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 LS Contribution 357.36 15.07 5.39 5.39 Total: 0.00 -7.37 357.36 -9.59 -16.96 By element: Atomic # 1 Polarization: -4.50 SS G_CDS: -5.50 Total: -10.00 kcal Atomic # 6 Polarization: 1.81 SS G_CDS: -2.44 Total: -0.62 kcal Atomic # 8 Polarization: -3.54 SS G_CDS: -1.59 Total: -5.13 kcal Atomic # 14 Polarization: -1.14 SS G_CDS: -5.46 Total: -6.60 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -7.37 -9.59 -16.96 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_11946942_16737258.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -128.346 kcal (2) G-P(sol) polarization free energy of solvation -7.369 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -135.715 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.594 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.963 kcal (6) G-S(sol) free energy of system = (1) + (5) -145.309 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds