Wall clock time and date at job start Sat Mar 6 2021 03:48:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 C 1.52997 * 109.47203 * 2 1 4 4 C 1.53007 * 109.47044 * 239.99770 * 2 1 3 5 5 O 1.42904 * 109.47186 * 120.00095 * 2 1 3 6 6 C 1.42899 * 114.00080 * 59.99919 * 5 2 1 7 7 H 1.09007 * 112.90802 * 341.25358 * 6 5 2 8 8 C 1.53777 * 113.61534 * 112.50071 * 6 5 2 9 9 C 1.53780 * 87.08064 * 139.98316 * 8 6 5 10 10 H 1.09003 * 113.69316 * 89.12706 * 9 8 6 11 11 C 1.53004 * 113.61461 * 220.02137 * 9 8 6 12 12 O 1.45201 * 109.47059 * 272.49610 * 11 9 8 13 13 C 1.34729 * 117.00050 * 179.97438 * 12 11 9 14 14 O 1.21486 * 119.99705 * 0.02562 * 13 12 11 15 15 C 1.47594 * 120.00017 * 179.97438 * 13 12 11 16 16 C 1.39685 * 120.12427 * 179.97438 * 15 13 12 17 17 C 1.37841 * 119.87374 * 180.02562 * 16 15 13 18 18 C 1.50709 * 119.93541 * 180.02562 * 17 16 15 19 19 O 1.42898 * 109.47083 * 254.98312 * 18 17 16 20 20 Si 1.86295 * 109.46711 * 134.98282 * 18 17 16 21 21 C 1.38638 * 120.12723 * 0.02562 * 17 16 15 22 22 F 1.35099 * 119.87949 * 180.26911 * 21 17 16 23 23 C 1.38695 * 120.24791 * 359.97438 * 21 17 16 24 24 C 1.37796 * 120.12074 * 359.97438 * 23 21 17 25 25 C 1.53779 * 113.61600 * 210.00251 * 6 5 2 26 26 H 1.09000 * 109.47013 * 299.99856 * 1 2 3 27 27 H 1.08997 * 109.47415 * 59.99814 * 1 2 3 28 28 H 1.09002 * 109.47212 * 179.97438 * 1 2 3 29 29 H 1.09004 * 109.47340 * 180.02562 * 3 2 1 30 30 H 1.09002 * 109.46960 * 299.99663 * 3 2 1 31 31 H 1.08996 * 109.47468 * 60.00290 * 3 2 1 32 32 H 1.08995 * 109.47019 * 300.00170 * 4 2 1 33 33 H 1.09009 * 109.46709 * 60.00309 * 4 2 1 34 34 H 1.08997 * 109.47150 * 180.02562 * 4 2 1 35 35 H 1.09001 * 113.61456 * 25.43102 * 8 6 5 36 36 H 1.09002 * 113.61878 * 254.53046 * 8 6 5 37 37 H 1.09003 * 109.47097 * 152.49656 * 11 9 8 38 38 H 1.08999 * 109.46925 * 32.49467 * 11 9 8 39 39 H 1.07996 * 120.06334 * 0.05074 * 16 15 13 40 40 H 1.08998 * 109.47191 * 14.98725 * 18 17 16 41 41 H 0.96705 * 113.99507 * 180.02562 * 19 18 17 42 42 H 1.48495 * 110.00336 * 60.00127 * 20 18 17 43 43 H 1.48499 * 109.99942 * 181.31952 * 20 18 17 44 44 H 1.08000 * 119.93411 * 180.02562 * 23 21 17 45 45 H 1.08000 * 120.05477 * 179.97438 * 24 23 21 46 46 H 1.08993 * 113.61370 * 105.46596 * 25 6 5 47 47 H 1.08998 * 113.68735 * 334.57281 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0399 -0.7213 -1.2493 5 8 2.0063 -0.6737 1.1668 6 6 1.5847 -2.0355 1.2645 7 1 0.7241 -2.2596 0.6340 8 6 2.7333 -3.0478 1.1213 9 6 2.0561 -3.8557 2.2409 10 1 1.3243 -4.5779 1.8788 11 6 3.0419 -4.4602 3.2428 12 8 3.4833 -5.7582 2.7644 13 6 4.3610 -6.4284 3.5362 14 8 4.7466 -5.9419 4.5805 15 6 4.8531 -7.7542 3.1136 16 6 5.7635 -8.4511 3.9115 17 6 6.2202 -9.6886 3.5115 18 6 7.2020 -10.4420 4.3716 19 8 8.5020 -10.3735 3.7822 20 14 6.6728 -12.2233 4.5033 21 6 5.7780 -10.2416 2.3196 22 9 6.2246 -11.4573 1.9350 23 6 4.8741 -9.5542 1.5233 24 6 4.4101 -8.3168 1.9138 25 6 1.4332 -2.5311 2.7123 26 1 -0.3633 0.5138 0.8900 27 1 -0.3634 0.5138 -0.8899 28 1 -0.3634 -1.0277 -0.0005 29 1 3.1300 1.4425 -0.0005 30 1 1.6767 1.9563 -0.8900 31 1 1.6767 1.9563 0.8900 32 1 1.6766 -1.7489 -1.2492 33 1 1.6766 -0.2074 -2.1393 34 1 3.1299 -0.7217 -1.2491 35 1 3.7071 -2.6457 1.4007 36 1 2.7462 -3.5605 0.1594 37 1 2.5520 -4.5767 4.2095 38 1 3.9028 -3.8001 3.3488 39 1 6.1087 -8.0213 4.8402 40 1 7.2300 -9.9969 5.3662 41 1 9.1860 -10.8384 4.2835 42 1 6.6305 -12.8418 3.1539 43 1 7.6151 -12.9700 5.3748 44 1 4.5327 -9.9899 0.5960 45 1 3.7066 -7.7823 1.2927 46 1 0.3965 -2.6266 3.0349 47 1 2.0509 -1.9885 3.4279 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_12496220_14598394.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 03:48:26 Heat of formation + Delta-G solvation = -148.020296 kcal Electronic energy + Delta-G solvation = -28999.950558 eV Core-core repulsion = 24644.409418 eV Total energy + Delta-G solvation = -4355.541140 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 339.161 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -50.34622 -41.70076 -40.89129 -40.00449 -38.53604 -37.80673 -37.18416 -33.92483 -33.20132 -32.20157 -29.72819 -28.42536 -28.34556 -27.03467 -26.69027 -25.46914 -23.61413 -23.36276 -21.74845 -20.89273 -20.62796 -19.02145 -18.91472 -18.63105 -18.13203 -17.70198 -17.55032 -17.42582 -16.84212 -16.60165 -16.11070 -15.91790 -15.76944 -15.37258 -15.06994 -14.86169 -14.79837 -14.67234 -14.43067 -14.07988 -13.96805 -13.79217 -13.50602 -13.47902 -13.35957 -13.18007 -13.06470 -12.90331 -12.83625 -12.70002 -12.41769 -12.34064 -12.21143 -11.90973 -11.78492 -11.52691 -11.36112 -11.27708 -11.19845 -10.80693 -10.37455 -10.20241 -9.89101 -4.97472 -0.61497 -0.06180 1.17527 1.35196 1.50990 1.59557 1.98503 2.40510 2.68500 2.98018 3.11124 3.33771 3.47382 3.50511 3.53742 3.61565 3.71962 3.78183 3.86182 3.91160 3.93690 4.02228 4.04858 4.08084 4.18366 4.19507 4.40681 4.46868 4.53123 4.57449 4.61658 4.66670 4.71256 4.72750 4.75336 4.78606 4.85901 4.86271 4.88784 4.91254 4.95416 5.00283 5.06856 5.11733 5.25443 5.27686 5.32721 5.40436 5.51436 6.32787 6.38947 6.70500 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.104 3.896 3 C -0.139 4.139 4 C -0.176 4.176 5 O -0.361 6.361 6 C 0.062 3.938 7 H 0.093 0.907 8 C -0.149 4.149 9 C -0.111 4.111 10 H 0.106 0.894 11 C 0.081 3.919 12 O -0.350 6.350 13 C 0.513 3.487 14 O -0.502 6.502 15 C -0.138 4.138 16 C -0.005 4.005 17 C -0.120 4.120 18 C -0.074 4.074 19 O -0.533 6.533 20 Si 0.673 3.327 21 C 0.145 3.855 22 F -0.116 7.116 23 C -0.164 4.164 24 C -0.027 4.027 25 C -0.127 4.127 26 H 0.065 0.935 27 H 0.067 0.933 28 H 0.059 0.941 29 H 0.063 0.937 30 H 0.070 0.930 31 H 0.063 0.937 32 H 0.058 0.942 33 H 0.066 0.934 34 H 0.064 0.936 35 H 0.091 0.909 36 H 0.073 0.927 37 H 0.076 0.924 38 H 0.076 0.924 39 H 0.151 0.849 40 H 0.082 0.918 41 H 0.383 0.617 42 H -0.227 1.227 43 H -0.264 1.264 44 H 0.150 0.850 45 H 0.152 0.848 46 H 0.078 0.922 47 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.193 0.032 -1.160 4.351 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.236 4.236 2 C 0.066 3.934 3 C -0.196 4.196 4 C -0.234 4.234 5 O -0.280 6.280 6 C 0.004 3.996 7 H 0.111 0.889 8 C -0.187 4.187 9 C -0.130 4.130 10 H 0.124 0.876 11 C 0.008 3.992 12 O -0.267 6.267 13 C 0.357 3.643 14 O -0.390 6.390 15 C -0.139 4.139 16 C -0.023 4.023 17 C -0.121 4.121 18 C -0.183 4.183 19 O -0.341 6.341 20 Si 0.572 3.428 21 C 0.126 3.874 22 F -0.094 7.094 23 C -0.183 4.183 24 C -0.045 4.045 25 C -0.164 4.164 26 H 0.084 0.916 27 H 0.086 0.914 28 H 0.078 0.922 29 H 0.082 0.918 30 H 0.089 0.911 31 H 0.083 0.917 32 H 0.077 0.923 33 H 0.085 0.915 34 H 0.083 0.917 35 H 0.110 0.890 36 H 0.092 0.908 37 H 0.094 0.906 38 H 0.094 0.906 39 H 0.169 0.831 40 H 0.100 0.900 41 H 0.232 0.768 42 H -0.150 1.150 43 H -0.189 1.189 44 H 0.168 0.832 45 H 0.170 0.830 46 H 0.097 0.903 47 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -4.076 -0.221 -1.328 4.292 hybrid contribution 1.210 -0.027 -0.111 1.215 sum -2.866 -0.248 -1.439 3.216 Atomic orbital electron populations 1.22469 0.95628 1.02444 1.03095 1.21544 0.93112 0.93268 0.85524 1.21770 1.02040 0.93214 1.02614 1.22470 1.02327 1.00750 0.97815 1.88044 1.73727 1.23354 1.42894 1.23565 0.97018 0.81900 0.97116 0.88934 1.23642 0.99523 0.96536 0.98974 1.22368 0.97973 0.95948 0.96674 0.87590 1.23129 0.97848 0.80525 0.97708 1.86506 1.56820 1.33037 1.50350 1.20915 0.76472 0.85162 0.81720 1.90876 1.55978 1.68447 1.23738 1.19099 1.03131 0.93562 0.98137 1.20992 0.91748 0.90704 0.98896 1.19146 1.00894 0.96374 0.95712 1.24655 0.85056 1.11332 0.97235 1.86602 1.16902 1.77196 1.53384 0.95488 0.90823 0.74411 0.82076 1.17969 0.94540 0.81481 0.93456 1.91579 1.87380 1.39953 1.90493 1.21193 0.99363 0.96115 1.01588 1.21390 0.95859 0.93362 0.93867 1.23231 1.01901 0.94123 0.97172 0.91587 0.91356 0.92223 0.91758 0.91065 0.91746 0.92282 0.91533 0.91669 0.89036 0.90844 0.90576 0.90586 0.83135 0.89959 0.76820 1.15029 1.18899 0.83244 0.83028 0.90283 0.88678 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.17 8.38 37.15 0.31 0.49 16 2 C 0.10 0.00 1.11 -90.62 -0.10 -0.10 16 3 C -0.14 0.05 8.84 37.16 0.33 0.38 16 4 C -0.18 0.14 8.38 37.16 0.31 0.45 16 5 O -0.36 -0.53 10.00 -35.23 -0.35 -0.88 16 6 C 0.06 -0.03 2.82 -25.92 -0.07 -0.11 16 7 H 0.09 -0.14 5.55 -51.93 -0.29 -0.42 16 8 C -0.15 0.11 7.46 -25.92 -0.19 -0.08 16 9 C -0.11 0.15 4.02 -89.81 -0.36 -0.21 16 10 H 0.11 -0.23 8.14 -51.93 -0.42 -0.65 16 11 C 0.08 0.01 5.31 37.16 0.20 0.21 16 12 O -0.35 -0.37 9.47 -40.57 -0.38 -0.75 16 13 C 0.51 1.20 7.89 34.55 0.27 1.47 16 14 O -0.50 -2.47 16.13 -19.26 -0.31 -2.78 16 15 C -0.14 -0.13 5.87 -104.99 -0.62 -0.74 16 16 C -0.01 0.00 9.21 -39.19 -0.36 -0.37 16 17 C -0.12 -0.13 4.80 -104.61 -0.50 -0.63 16 18 C -0.07 -0.01 2.80 36.01 0.10 0.09 16 19 O -0.53 -0.80 12.86 -35.23 -0.45 -1.25 16 20 Si 0.67 -0.22 30.77 -169.99 -5.23 -5.45 16 21 C 0.15 0.19 6.68 -39.26 -0.26 -0.07 16 22 F -0.12 -0.32 12.82 2.25 0.03 -0.30 16 23 C -0.16 0.10 10.01 -39.57 -0.40 -0.30 16 24 C -0.03 0.02 9.61 -39.19 -0.38 -0.36 16 25 C -0.13 0.15 7.47 -25.92 -0.19 -0.05 16 26 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 27 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 28 H 0.06 -0.08 6.25 -51.93 -0.32 -0.41 16 29 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 30 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 31 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 32 H 0.06 -0.06 7.02 -51.93 -0.36 -0.43 16 33 H 0.07 -0.10 8.14 -51.92 -0.42 -0.52 16 34 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 35 H 0.09 0.03 7.90 -51.93 -0.41 -0.38 16 36 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 37 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 38 H 0.08 0.05 7.84 -51.93 -0.41 -0.36 16 39 H 0.15 0.04 7.58 -52.49 -0.40 -0.36 16 40 H 0.08 -0.15 7.77 -51.93 -0.40 -0.56 16 41 H 0.38 -0.96 8.74 45.56 0.40 -0.56 16 42 H -0.23 -0.60 5.33 56.52 0.30 -0.30 16 43 H -0.26 -0.43 7.11 56.52 0.40 -0.03 16 44 H 0.15 -0.40 8.06 -52.49 -0.42 -0.82 16 45 H 0.15 -0.41 7.61 -52.49 -0.40 -0.81 16 46 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 47 H 0.09 -0.05 8.10 -51.93 -0.42 -0.47 16 LS Contribution 387.11 15.07 5.83 5.83 Total: 0.00 -6.72 387.11 -10.17 -16.89 By element: Atomic # 1 Polarization: -4.00 SS G_CDS: -7.39 Total: -11.39 kcal Atomic # 6 Polarization: 1.99 SS G_CDS: -1.91 Total: 0.07 kcal Atomic # 8 Polarization: -4.17 SS G_CDS: -1.50 Total: -5.67 kcal Atomic # 9 Polarization: -0.32 SS G_CDS: 0.03 Total: -0.30 kcal Atomic # 14 Polarization: -0.22 SS G_CDS: -5.23 Total: -5.45 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -6.72 -10.17 -16.89 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_12496220_14598394.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -131.131 kcal (2) G-P(sol) polarization free energy of solvation -6.718 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -137.850 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.170 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.889 kcal (6) G-S(sol) free energy of system = (1) + (5) -148.020 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.47 seconds