Wall clock time and date at job start Sat Mar 6 2021 02:30:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86303 * 1 3 3 C 1.86301 * 109.46933 * 2 1 4 4 C 1.86291 * 109.47222 * 240.00143 * 2 1 3 5 5 C 1.86303 * 109.46923 * 119.99749 * 2 1 3 6 6 O 1.45198 * 109.46824 * 60.00436 * 5 2 1 7 7 C 1.34728 * 117.00462 * 75.00040 * 6 5 2 8 8 O 1.21488 * 119.99598 * 359.97438 * 7 6 5 9 9 C 1.47598 * 120.00216 * 180.02562 * 7 6 5 10 10 C 1.39681 * 120.12196 * 359.97438 * 9 7 6 11 11 C 1.37838 * 119.87391 * 180.02562 * 10 9 7 12 12 C 1.38653 * 120.12360 * 0.02562 * 11 10 9 13 13 F 1.35098 * 119.87476 * 179.97438 * 12 11 10 14 14 C 1.38690 * 120.24530 * 359.97438 * 12 11 10 15 15 C 1.50701 * 119.93393 * 179.97438 * 14 12 11 16 16 O 1.42895 * 109.47079 * 195.00491 * 15 14 12 17 17 Si 1.86301 * 109.47149 * 314.99986 * 15 14 12 18 18 H 1.48506 * 109.47302 * 59.99966 * 17 15 14 19 19 H 1.48503 * 109.47334 * 300.00099 * 17 15 14 20 20 H 1.48500 * 109.47376 * 180.02562 * 17 15 14 21 21 C 1.37786 * 120.12780 * 0.23559 * 14 12 11 22 22 H 1.09004 * 109.47400 * 299.99848 * 1 2 3 23 23 H 1.08998 * 109.47320 * 59.99859 * 1 2 3 24 24 H 1.09000 * 109.46951 * 180.02562 * 1 2 3 25 25 H 1.09000 * 109.46858 * 179.97438 * 3 2 1 26 26 H 1.08998 * 109.47232 * 300.00195 * 3 2 1 27 27 H 1.09000 * 109.47387 * 60.00120 * 3 2 1 28 28 H 1.09006 * 109.46689 * 300.00027 * 4 2 1 29 29 H 1.09001 * 109.47642 * 59.99501 * 4 2 1 30 30 H 1.08997 * 109.47465 * 179.97438 * 4 2 1 31 31 H 1.09000 * 109.47392 * 299.99877 * 5 2 1 32 32 H 1.08997 * 109.46782 * 179.97438 * 5 2 1 33 33 H 1.07999 * 120.06702 * 359.97438 * 10 9 7 34 34 H 1.08005 * 119.93720 * 179.97438 * 11 10 9 35 35 H 1.09001 * 109.47380 * 74.99888 * 15 14 12 36 36 H 0.96696 * 114.00435 * 59.99627 * 16 15 14 37 37 H 1.08003 * 120.06814 * 179.72364 * 21 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7565 0.0000 4 6 2.4840 -0.8781 -1.5211 5 6 2.4840 -0.8782 1.5212 6 8 2.0000 -2.2471 1.5211 7 6 2.5964 -3.1068 0.6724 8 8 3.4960 -2.7230 -0.0483 9 6 2.1562 -4.5145 0.6173 10 6 1.1218 -4.9584 1.4445 11 6 0.7152 -6.2742 1.3892 12 6 1.3312 -7.1568 0.5151 13 9 0.9289 -8.4456 0.4655 14 6 2.3587 -6.7215 -0.3084 15 6 3.0237 -7.6870 -1.2554 16 8 4.2483 -7.1227 -1.7287 17 14 3.3793 -9.2845 -0.3653 18 1 2.1068 -9.8710 0.1267 19 1 4.2800 -9.0202 0.7854 20 1 4.0352 -10.2356 -1.2983 21 6 2.7763 -5.4094 -0.2585 22 1 -0.3634 0.5138 0.8900 23 1 -0.3634 0.5138 -0.8899 24 1 -0.3633 -1.0277 0.0005 25 1 3.5740 1.7565 0.0005 26 1 2.1206 2.2703 -0.8899 27 1 2.1207 2.2703 0.8900 28 1 2.1206 -1.9059 -1.5210 29 1 2.1207 -0.3644 -2.4111 30 1 3.5740 -0.8778 -1.5213 31 1 2.1207 -0.3643 2.4112 32 1 3.5740 -0.8786 1.5210 33 1 0.6421 -4.2721 2.1266 34 1 -0.0842 -6.6186 2.0286 35 1 2.3626 -7.8811 -2.1000 36 1 4.8859 -6.9239 -1.0295 37 1 3.5796 -5.0726 -0.8971 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_12496220_4858416.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 02:30:41 Heat of formation + Delta-G solvation = -160.231833 kcal Electronic energy + Delta-G solvation = -20858.420013 eV Core-core repulsion = 17446.739047 eV Total energy + Delta-G solvation = -3411.680966 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 286.100 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -50.43661 -41.67629 -40.16002 -37.82209 -37.32828 -32.98700 -32.19749 -29.73162 -28.51950 -28.37792 -28.25877 -27.10752 -24.98358 -23.31881 -21.78640 -19.36315 -19.02229 -18.13131 -18.02977 -17.43540 -17.39101 -17.12353 -16.09627 -15.78774 -15.31229 -15.21134 -14.90075 -14.60389 -14.29940 -14.18686 -14.04797 -13.90949 -13.83532 -13.52898 -13.42929 -13.29158 -13.07626 -12.99331 -12.90174 -12.48320 -12.43226 -12.03113 -11.59422 -11.30908 -10.99111 -10.93513 -10.78720 -10.44242 -10.17747 -9.79931 -0.65631 -0.08609 1.04108 1.31252 1.42921 1.43638 1.49641 1.51726 1.81303 1.90837 1.98615 2.43771 2.51130 2.89961 3.16460 3.26891 3.53058 3.68093 3.91436 4.02267 4.15817 4.35422 4.51006 4.60428 4.64338 4.66242 4.67281 4.70857 4.73261 4.81361 4.88253 4.89711 4.94188 4.99766 5.33039 5.40774 5.48433 5.49049 5.72792 6.36341 6.72854 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.446 4.446 2 Si 0.999 3.001 3 C -0.447 4.447 4 C -0.437 4.437 5 C -0.238 4.238 6 O -0.332 6.332 7 C 0.494 3.506 8 O -0.484 6.484 9 C -0.131 4.131 10 C -0.037 4.037 11 C -0.158 4.158 12 C 0.125 3.875 13 F -0.119 7.119 14 C -0.163 4.163 15 C -0.077 4.077 16 O -0.534 6.534 17 Si 0.938 3.062 18 H -0.227 1.227 19 H -0.252 1.252 20 H -0.251 1.251 21 C -0.017 4.017 22 H 0.070 0.930 23 H 0.071 0.929 24 H 0.070 0.930 25 H 0.071 0.929 26 H 0.075 0.925 27 H 0.070 0.930 28 H 0.065 0.935 29 H 0.062 0.938 30 H 0.077 0.923 31 H 0.111 0.889 32 H 0.082 0.918 33 H 0.152 0.848 34 H 0.150 0.850 35 H 0.129 0.871 36 H 0.379 0.621 37 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.649 1.021 2.326 3.028 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.554 4.554 2 Si 1.194 2.806 3 C -0.555 4.555 4 C -0.545 4.545 5 C -0.356 4.356 6 O -0.248 6.248 7 C 0.338 3.662 8 O -0.373 6.373 9 C -0.133 4.133 10 C -0.055 4.055 11 C -0.176 4.176 12 C 0.106 3.894 13 F -0.097 7.097 14 C -0.164 4.164 15 C -0.187 4.187 16 O -0.339 6.339 17 Si 0.758 3.242 18 H -0.150 1.150 19 H -0.175 1.175 20 H -0.175 1.175 21 C -0.035 4.035 22 H 0.089 0.911 23 H 0.091 0.909 24 H 0.089 0.911 25 H 0.091 0.909 26 H 0.094 0.906 27 H 0.089 0.911 28 H 0.084 0.916 29 H 0.081 0.919 30 H 0.096 0.904 31 H 0.129 0.871 32 H 0.100 0.900 33 H 0.169 0.831 34 H 0.168 0.832 35 H 0.146 0.854 36 H 0.226 0.774 37 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges -1.505 0.261 2.025 2.537 hybrid contribution 0.124 0.444 0.408 0.616 sum -1.381 0.705 2.433 2.885 Atomic orbital electron populations 1.26065 1.20041 1.04689 1.04616 0.79713 0.67691 0.67149 0.66002 1.26042 1.06525 1.18042 1.04863 1.26247 1.07078 1.07280 1.13890 1.28383 1.05397 0.83595 1.18235 1.86448 1.58982 1.21349 1.58052 1.20988 0.80622 0.86556 0.78014 1.90865 1.28483 1.77907 1.40030 1.19164 1.00985 0.90958 1.02146 1.21420 0.93286 0.95104 0.95684 1.21195 1.02484 0.93325 1.00644 1.17862 0.95273 0.79407 0.96888 1.91610 1.89318 1.33572 1.95235 1.20344 0.98965 0.96675 1.00412 1.24946 0.88177 1.03495 1.02092 1.86531 1.25576 1.84643 1.37125 0.86078 0.81907 0.76756 0.79470 1.14950 1.17491 1.17489 1.20967 0.97796 0.90058 0.94670 0.91063 0.90942 0.91082 0.90940 0.90622 0.91051 0.91552 0.91851 0.90366 0.87074 0.89968 0.83073 0.83248 0.85395 0.77361 0.82400 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.53 8.65 101.05 0.87 1.40 16 2 Si 1.00 -1.71 12.12 -169.99 -2.06 -3.77 16 3 C -0.45 0.71 8.65 101.05 0.87 1.58 16 4 C -0.44 -0.38 7.10 101.05 0.72 0.34 16 5 C -0.24 0.21 5.40 101.05 0.55 0.76 16 6 O -0.33 -0.21 9.16 -40.57 -0.37 -0.59 16 7 C 0.49 0.80 6.67 34.55 0.23 1.03 16 8 O -0.48 -1.58 12.05 -19.26 -0.23 -1.81 16 9 C -0.13 -0.06 5.87 -104.98 -0.62 -0.68 16 10 C -0.04 0.04 9.61 -39.19 -0.38 -0.34 16 11 C -0.16 0.20 10.01 -39.57 -0.40 -0.19 16 12 C 0.13 0.00 6.67 -39.26 -0.26 -0.26 16 13 F -0.12 -0.09 12.82 2.25 0.03 -0.06 16 14 C -0.16 0.01 5.13 -104.62 -0.54 -0.53 16 15 C -0.08 0.05 2.97 36.01 0.11 0.15 16 16 O -0.53 0.09 11.64 -35.23 -0.41 -0.32 16 17 Si 0.94 -0.22 26.09 -169.99 -4.43 -4.66 16 18 H -0.23 -0.11 5.28 56.52 0.30 0.19 16 19 H -0.25 -0.09 7.11 56.52 0.40 0.31 16 20 H -0.25 -0.27 7.11 56.52 0.40 0.13 16 21 C -0.02 0.00 8.78 -39.19 -0.34 -0.35 16 22 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 23 H 0.07 -0.08 7.96 -51.93 -0.41 -0.50 16 24 H 0.07 -0.05 7.96 -51.93 -0.41 -0.46 16 25 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 26 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 27 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 28 H 0.07 0.13 6.28 -51.93 -0.33 -0.19 16 29 H 0.06 0.02 7.96 -51.93 -0.41 -0.39 16 30 H 0.08 0.15 7.42 -51.93 -0.39 -0.24 16 31 H 0.11 -0.31 7.96 -51.93 -0.41 -0.73 16 32 H 0.08 -0.04 7.52 -51.93 -0.39 -0.43 16 33 H 0.15 -0.43 7.61 -52.49 -0.40 -0.83 16 34 H 0.15 -0.49 8.06 -52.48 -0.42 -0.91 16 35 H 0.13 -0.18 7.96 -51.93 -0.41 -0.59 16 36 H 0.38 -1.27 8.42 45.56 0.38 -0.89 16 37 H 0.16 0.03 6.65 -52.48 -0.35 -0.32 16 LS Contribution 312.51 15.07 4.71 4.71 Total: 0.00 -5.08 312.51 -6.46 -11.54 By element: Atomic # 1 Polarization: -3.46 SS G_CDS: -4.51 Total: -7.97 kcal Atomic # 6 Polarization: 2.10 SS G_CDS: 0.82 Total: 2.92 kcal Atomic # 8 Polarization: -1.70 SS G_CDS: -1.01 Total: -2.71 kcal Atomic # 9 Polarization: -0.09 SS G_CDS: 0.03 Total: -0.06 kcal Atomic # 14 Polarization: -1.94 SS G_CDS: -6.49 Total: -8.43 kcal Total LS contribution 4.71 Total: 4.71 kcal Total: -5.08 -6.46 -11.54 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_12496220_4858416.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -148.691 kcal (2) G-P(sol) polarization free energy of solvation -5.079 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -153.769 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.462 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -11.541 kcal (6) G-S(sol) free energy of system = (1) + (5) -160.232 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds