Wall clock time and date at job start Sat Mar 6 2021 02:24:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86302 * 109.47154 * 2 1 4 4 C 1.50697 * 109.47331 * 120.00317 * 2 1 3 5 5 C 1.35092 * 126.07494 * 255.35263 * 4 2 1 6 6 N 1.35039 * 107.97664 * 180.12352 * 5 4 2 7 7 C 1.46503 * 125.92587 * 179.83609 * 6 5 4 8 8 C 1.50693 * 109.46855 * 124.71918 * 7 6 5 9 9 O 1.20828 * 120.00598 * 359.97438 * 8 7 6 10 10 O 1.34235 * 120.00018 * 180.02562 * 8 7 6 11 11 C 1.45196 * 116.99918 * 179.97438 * 10 8 7 12 12 C 1.53005 * 109.46747 * 179.97438 * 11 10 8 13 13 H 1.08990 * 112.85335 * 316.19896 * 12 11 10 14 14 C 1.53790 * 113.68760 * 87.46730 * 12 11 10 15 15 C 1.53776 * 87.07856 * 139.99089 * 14 12 11 16 16 H 1.09002 * 113.69340 * 89.12692 * 15 14 12 17 17 O 1.42903 * 113.61415 * 220.01390 * 15 14 12 18 18 C 1.53774 * 87.08537 * 334.56697 * 15 14 12 19 19 N 1.40063 * 108.13940 * 359.57486 * 6 5 4 20 20 C 1.31622 * 108.11067 * 0.26067 * 19 6 5 21 21 C 1.48421 * 126.03878 * 179.97438 * 20 19 6 22 22 C 1.39325 * 120.11805 * 144.75282 * 21 20 19 23 23 C 1.38023 * 119.87395 * 179.72169 * 22 21 20 24 24 C 1.38319 * 120.12254 * 0.55411 * 23 22 21 25 25 C 1.38320 * 120.24217 * 359.71995 * 24 23 22 26 26 C 1.38027 * 120.11832 * 0.02562 * 25 24 23 27 27 H 0.96706 * 113.99930 * 300.00362 * 1 2 3 28 28 H 1.08997 * 109.47112 * 240.00375 * 2 1 3 29 29 H 1.48505 * 110.00028 * 178.68359 * 3 2 1 30 30 H 1.48499 * 110.00145 * 300.00066 * 3 2 1 31 31 H 1.08001 * 126.00942 * 359.97438 * 5 4 2 32 32 H 1.08996 * 109.47458 * 4.71554 * 7 6 5 33 33 H 1.09002 * 109.46760 * 244.71883 * 7 6 5 34 34 H 1.08999 * 109.47364 * 60.00287 * 11 10 8 35 35 H 1.08999 * 109.47492 * 299.99633 * 11 10 8 36 36 H 1.08994 * 113.61345 * 25.44156 * 14 12 11 37 37 H 1.08999 * 113.60844 * 254.53724 * 14 12 11 38 38 H 0.96700 * 114.00311 * 277.50236 * 17 15 14 39 39 H 1.08995 * 113.62199 * 139.98636 * 18 15 14 40 40 H 1.09008 * 113.61305 * 270.80075 * 18 15 14 41 41 H 1.07998 * 120.06027 * 359.97411 * 22 21 20 42 42 H 1.08003 * 119.93862 * 180.27762 * 23 22 21 43 43 H 1.08005 * 119.88091 * 179.74689 * 24 23 22 44 44 H 1.07998 * 119.94711 * 180.02562 * 25 24 23 45 45 H 1.08000 * 120.05884 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.4568 -0.1246 2.3284 6 7 2.7872 -1.0991 3.2029 7 6 3.3916 -0.9009 4.5227 8 6 2.5377 -1.5659 5.5712 9 8 1.5275 -2.1456 5.2492 10 8 2.8986 -1.5136 6.8630 11 6 2.0281 -2.1758 7.8180 12 6 2.5987 -2.0105 9.2280 13 1 3.6754 -2.1747 9.2709 14 6 2.1437 -0.7208 9.9314 15 6 2.0187 -1.5585 11.2149 16 1 2.9361 -1.5998 11.8021 17 8 0.8708 -1.2329 12.0014 18 6 1.8149 -2.7804 10.3039 19 7 2.4463 -2.3316 2.6317 20 6 1.9300 -2.1028 1.4428 21 6 1.4345 -3.1304 0.4934 22 6 0.3292 -2.8635 -0.3116 23 6 -0.1238 -3.8206 -1.1969 24 6 0.5105 -5.0472 -1.2775 25 6 1.6048 -5.3196 -0.4765 26 6 2.0694 -4.3677 0.4085 27 1 -0.3933 0.4418 0.7651 28 1 1.7923 -0.5138 -0.8900 29 1 3.5346 1.7703 0.0321 30 1 1.5615 2.4679 -1.2085 31 1 2.5914 0.9363 2.4791 32 1 3.4613 0.1661 4.7340 33 1 4.3894 -1.3395 4.5349 34 1 1.9624 -3.2363 7.5751 35 1 1.0343 -1.7305 7.7734 36 1 1.1913 -0.3369 9.5660 37 1 2.9180 0.0446 9.9833 38 1 0.9928 -0.4652 12.5765 39 1 2.3235 -3.6777 10.6565 40 1 0.7723 -2.9604 10.0416 41 1 -0.1697 -1.9079 -0.2460 42 1 -0.9778 -3.6132 -1.8246 43 1 0.1502 -5.7949 -1.9687 44 1 2.0967 -6.2787 -0.5437 45 1 2.9242 -4.5813 1.0331 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_12622148_11354868.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 02:24:34 Heat of formation + Delta-G solvation = -21.497000 kcal Electronic energy + Delta-G solvation = -29297.549896 eV Core-core repulsion = 25056.956569 eV Total energy + Delta-G solvation = -4240.593327 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.145 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -42.56105 -41.52481 -40.33928 -39.63869 -37.88631 -37.54906 -36.06036 -34.88763 -32.36768 -31.80284 -31.38533 -30.07133 -28.61919 -26.89009 -26.04280 -24.42924 -23.50714 -23.31330 -22.23538 -21.50495 -20.97743 -20.65384 -18.93620 -18.84420 -18.53973 -17.88993 -17.66638 -17.36700 -16.96671 -16.56600 -16.34355 -16.23358 -15.78352 -15.55955 -15.44462 -15.36966 -14.84962 -14.62882 -14.35501 -14.19591 -14.04088 -13.88030 -13.77821 -13.59414 -13.52760 -13.33653 -12.89540 -12.52498 -12.43540 -12.36941 -12.23777 -11.99950 -11.86981 -11.78937 -11.65174 -11.47851 -11.33412 -10.87972 -10.71875 -10.30430 -9.74480 -9.66045 -9.21320 -5.09743 0.21413 0.65458 0.68507 1.02368 1.05666 1.31031 1.59900 1.62712 1.83379 1.98284 3.02410 3.07413 3.24733 3.28695 3.38404 3.46427 3.49951 3.56450 3.66624 3.75030 3.78088 3.79335 4.05449 4.08437 4.11655 4.20968 4.25225 4.34974 4.40440 4.45980 4.50951 4.59303 4.63378 4.64220 4.74107 4.81394 4.82493 4.91439 4.97087 5.13183 5.17840 5.30973 5.34468 5.40673 5.72203 5.75544 5.81094 5.81543 6.22754 6.57793 6.60678 6.61838 6.64658 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.028 4.028 3 Si 0.685 3.315 4 C -0.250 4.250 5 C 0.068 3.932 6 N -0.367 5.367 7 C 0.147 3.853 8 C 0.444 3.556 9 O -0.473 6.473 10 O -0.355 6.355 11 C 0.082 3.918 12 C -0.111 4.111 13 H 0.107 0.893 14 C -0.164 4.164 15 C 0.076 3.924 16 H 0.086 0.914 17 O -0.560 6.560 18 C -0.121 4.121 19 N -0.255 5.255 20 C 0.139 3.861 21 C -0.025 4.025 22 C -0.099 4.099 23 C -0.125 4.125 24 C -0.111 4.111 25 C -0.127 4.127 26 C -0.092 4.092 27 H 0.378 0.622 28 H 0.114 0.886 29 H -0.256 1.256 30 H -0.253 1.253 31 H 0.183 0.817 32 H 0.143 0.857 33 H 0.131 0.869 34 H 0.076 0.924 35 H 0.075 0.925 36 H 0.091 0.909 37 H 0.075 0.925 38 H 0.381 0.619 39 H 0.081 0.919 40 H 0.095 0.905 41 H 0.157 0.843 42 H 0.125 0.875 43 H 0.122 0.878 44 H 0.124 0.876 45 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.101 5.131 3.836 7.117 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.140 4.140 3 Si 0.587 3.413 4 C -0.261 4.261 5 C -0.076 4.076 6 N -0.149 5.149 7 C 0.024 3.976 8 C 0.283 3.717 9 O -0.357 6.357 10 O -0.272 6.272 11 C 0.009 3.991 12 C -0.129 4.129 13 H 0.126 0.874 14 C -0.202 4.202 15 C 0.017 3.983 16 H 0.103 0.897 17 O -0.365 6.365 18 C -0.158 4.158 19 N -0.075 5.075 20 C -0.027 4.027 21 C -0.027 4.027 22 C -0.117 4.117 23 C -0.143 4.143 24 C -0.130 4.130 25 C -0.145 4.145 26 C -0.111 4.111 27 H 0.226 0.774 28 H 0.131 0.869 29 H -0.180 1.180 30 H -0.177 1.177 31 H 0.200 0.800 32 H 0.160 0.840 33 H 0.148 0.852 34 H 0.094 0.906 35 H 0.093 0.907 36 H 0.110 0.890 37 H 0.094 0.906 38 H 0.228 0.772 39 H 0.100 0.900 40 H 0.113 0.887 41 H 0.174 0.826 42 H 0.143 0.857 43 H 0.140 0.860 44 H 0.142 0.858 45 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 3.514 3.883 3.533 6.317 hybrid contribution 0.148 0.310 -0.283 0.445 sum 3.662 4.193 3.250 6.446 Atomic orbital electron populations 1.86386 1.17696 1.80982 1.49436 1.24310 0.84536 1.09134 0.96025 0.95281 0.80750 0.77327 0.87970 1.20480 1.13170 0.93251 0.99227 1.22254 0.99872 0.95270 0.90232 1.47912 1.49277 1.04658 1.13089 1.21010 0.96210 1.03795 0.76578 1.23487 0.85544 0.79348 0.83286 1.90807 1.24806 1.38584 1.81515 1.86438 1.53025 1.70951 1.16748 1.23118 0.92672 0.97642 0.85690 1.22378 1.01386 0.98180 0.90963 0.87439 1.23794 1.02502 0.96913 0.96957 1.23278 0.89023 0.96010 0.89949 0.89652 1.86535 1.37816 1.52738 1.59439 1.23077 1.01790 0.97070 0.93899 1.77797 1.19443 1.01610 1.08651 1.20661 0.97559 0.92467 0.92030 1.17798 0.96901 0.92056 0.95934 1.21943 0.94890 1.01092 0.93821 1.21151 1.00362 0.93646 0.99151 1.21311 0.95685 0.97124 0.98837 1.21083 0.97349 0.99357 0.96740 1.21218 0.99649 0.92353 0.97893 0.77368 0.86876 1.18022 1.17742 0.79980 0.83967 0.85155 0.90600 0.90663 0.89040 0.90638 0.77161 0.89986 0.88689 0.82601 0.85668 0.85956 0.85814 0.85943 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.11 10.10 -35.23 -0.36 -0.25 16 2 C -0.03 0.00 2.00 36.00 0.07 0.07 16 3 Si 0.69 -1.27 30.75 -169.99 -5.23 -6.50 16 4 C -0.25 -0.32 5.34 -104.76 -0.56 -0.88 16 5 C 0.07 -0.06 9.96 -17.26 -0.17 -0.23 16 6 N -0.37 -0.40 3.40 -62.58 -0.21 -0.61 16 7 C 0.15 -0.35 7.10 -5.20 -0.04 -0.39 16 8 C 0.44 0.46 7.99 36.00 0.29 0.75 16 9 O -0.47 -2.56 15.45 -18.75 -0.29 -2.85 16 10 O -0.35 -0.01 10.22 -39.27 -0.40 -0.41 16 11 C 0.08 -0.01 5.31 37.16 0.20 0.19 16 12 C -0.11 0.19 4.02 -89.80 -0.36 -0.17 16 13 H 0.11 -0.26 8.14 -51.93 -0.42 -0.68 16 14 C -0.16 0.30 7.47 -25.92 -0.19 0.10 16 15 C 0.08 -0.11 5.21 -25.93 -0.14 -0.24 16 16 H 0.09 -0.24 8.14 -51.93 -0.42 -0.66 16 17 O -0.56 -0.07 13.67 -35.23 -0.48 -0.55 16 18 C -0.12 0.14 7.47 -25.92 -0.19 -0.05 16 19 N -0.26 -1.24 11.63 33.43 0.39 -0.85 16 20 C 0.14 0.59 6.74 -82.78 -0.56 0.03 16 21 C -0.02 -0.11 5.80 -104.89 -0.61 -0.72 16 22 C -0.10 -0.36 8.94 -39.26 -0.35 -0.71 16 23 C -0.13 -0.34 10.03 -39.63 -0.40 -0.73 16 24 C -0.11 -0.26 10.04 -39.52 -0.40 -0.66 16 25 C -0.13 -0.35 10.03 -39.63 -0.40 -0.75 16 26 C -0.09 -0.37 9.75 -39.25 -0.38 -0.75 16 27 H 0.38 -1.43 8.70 45.56 0.40 -1.03 16 28 H 0.11 0.13 7.84 -51.93 -0.41 -0.27 16 29 H -0.26 -0.14 7.11 56.52 0.40 0.27 16 30 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 31 H 0.18 -0.99 6.41 -52.49 -0.34 -1.32 16 32 H 0.14 -0.96 8.07 -51.93 -0.42 -1.38 16 33 H 0.13 -0.55 8.14 -51.93 -0.42 -0.97 16 34 H 0.08 0.04 8.13 -51.93 -0.42 -0.38 16 35 H 0.08 0.03 7.84 -51.93 -0.41 -0.38 16 36 H 0.09 -0.09 7.90 -51.93 -0.41 -0.50 16 37 H 0.07 -0.19 8.14 -51.93 -0.42 -0.62 16 38 H 0.38 -1.50 9.12 45.56 0.42 -1.09 16 39 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 40 H 0.09 -0.02 8.10 -51.92 -0.42 -0.44 16 41 H 0.16 0.47 4.52 -52.49 -0.24 0.23 16 42 H 0.13 0.10 8.06 -52.48 -0.42 -0.32 16 43 H 0.12 0.03 8.06 -52.48 -0.42 -0.39 16 44 H 0.12 0.10 8.06 -52.49 -0.42 -0.33 16 45 H 0.12 0.44 8.06 -52.49 -0.42 0.02 16 LS Contribution 382.22 15.07 5.76 5.76 Total: 0.00 -11.95 382.22 -10.26 -22.21 By element: Atomic # 1 Polarization: -5.57 SS G_CDS: -5.25 Total: -10.83 kcal Atomic # 6 Polarization: -0.95 SS G_CDS: -4.19 Total: -5.13 kcal Atomic # 7 Polarization: -1.64 SS G_CDS: 0.18 Total: -1.46 kcal Atomic # 8 Polarization: -2.53 SS G_CDS: -1.53 Total: -4.05 kcal Atomic # 14 Polarization: -1.27 SS G_CDS: -5.23 Total: -6.50 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -11.95 -10.26 -22.21 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_12622148_11354868.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.715 kcal (2) G-P(sol) polarization free energy of solvation -11.955 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.240 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.257 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.212 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.497 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds