Wall clock time and date at job start Sat Mar 6 2021 02:29:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86302 * 109.46906 * 2 1 4 4 C 1.50701 * 109.47184 * 240.00065 * 2 1 3 5 5 C 1.35081 * 126.07586 * 104.01638 * 4 2 1 6 6 N 1.35042 * 107.97819 * 180.28198 * 5 4 2 7 7 C 1.46503 * 125.92985 * 179.74840 * 6 5 4 8 8 C 1.50695 * 109.47183 * 124.99941 * 7 6 5 9 9 O 1.20834 * 119.99959 * 0.02562 * 8 7 6 10 10 O 1.34230 * 120.00087 * 179.97438 * 8 7 6 11 11 C 1.45201 * 116.99737 * 179.97438 * 10 8 7 12 12 C 1.53000 * 109.46805 * 180.02562 * 11 10 8 13 13 H 1.09006 * 109.47025 * 305.00162 * 12 11 10 14 14 C 1.53005 * 109.47421 * 65.00281 * 12 11 10 15 15 C 1.52991 * 109.47021 * 180.02562 * 14 12 11 16 16 C 1.52995 * 109.47566 * 299.99443 * 15 14 12 17 17 H 1.08998 * 109.47424 * 300.00818 * 16 15 14 18 18 O 1.42894 * 109.47584 * 180.02562 * 16 15 14 19 19 C 1.53008 * 109.46855 * 60.00243 * 16 15 14 20 20 C 1.53000 * 109.47235 * 300.00265 * 19 16 15 21 21 N 1.40066 * 108.14083 * 359.72511 * 6 5 4 22 22 C 1.31624 * 108.10551 * 0.02562 * 21 6 5 23 23 C 1.48424 * 126.03516 * 179.97438 * 22 21 6 24 24 C 1.39326 * 120.12004 * 43.67926 * 23 22 21 25 25 C 1.38016 * 119.87865 * 180.02562 * 24 23 22 26 26 C 1.38323 * 120.12019 * 359.97438 * 25 24 23 27 27 C 1.38313 * 120.24048 * 0.02562 * 26 25 24 28 28 C 1.38018 * 120.12279 * 0.02562 * 27 26 25 29 29 H 0.96697 * 114.00552 * 59.99781 * 1 2 3 30 30 H 1.09001 * 109.47138 * 119.99721 * 2 1 3 31 31 H 1.48499 * 110.00118 * 298.68172 * 3 2 1 32 32 H 1.48493 * 110.00091 * 60.00210 * 3 2 1 33 33 H 1.08004 * 126.01437 * 0.02562 * 5 4 2 34 34 H 1.09005 * 109.46896 * 245.00195 * 7 6 5 35 35 H 1.09001 * 109.47254 * 5.00032 * 7 6 5 36 36 H 1.09002 * 109.47604 * 300.00179 * 11 10 8 37 37 H 1.09003 * 109.47346 * 60.00601 * 11 10 8 38 38 H 1.09004 * 109.46804 * 299.99963 * 14 12 11 39 39 H 1.08994 * 109.47031 * 59.99486 * 14 12 11 40 40 H 1.09004 * 109.46589 * 179.97438 * 15 14 12 41 41 H 1.08998 * 109.47416 * 60.00266 * 15 14 12 42 42 H 0.96702 * 113.99924 * 60.00643 * 18 16 15 43 43 H 1.08994 * 109.47188 * 180.02562 * 19 16 15 44 44 H 1.08998 * 109.46635 * 60.00092 * 19 16 15 45 45 H 1.08998 * 109.46868 * 300.00413 * 20 19 16 46 46 H 1.09001 * 109.47249 * 179.97438 * 20 19 16 47 47 H 1.07997 * 120.05734 * 0.04077 * 24 23 22 48 48 H 1.07998 * 119.94140 * 180.25856 * 25 24 23 49 49 H 1.07997 * 119.87789 * 179.97438 * 26 25 24 50 50 H 1.08004 * 119.93846 * 179.97438 * 27 26 25 51 51 H 1.08000 * 120.06453 * 179.97438 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.4458 -0.1239 -2.3332 6 7 2.7721 -1.0981 -3.2097 7 6 3.3570 -0.8988 -4.5380 8 6 4.6320 -1.6943 -4.6499 9 8 5.0128 -2.3600 -3.7161 10 8 5.3441 -1.6644 -5.7874 11 6 6.5617 -2.4545 -5.8237 12 6 7.2323 -2.2954 -7.1897 13 1 6.5224 -2.5545 -7.9753 14 6 7.6854 -0.8452 -7.3697 15 6 8.3553 -0.6860 -8.7359 16 6 9.5691 -1.6136 -8.8200 17 1 10.2793 -1.3548 -8.0347 18 8 10.1952 -1.4645 -10.0958 19 6 9.1161 -3.0639 -8.6400 20 6 8.4461 -3.2232 -7.2738 21 7 2.4548 -2.3322 -2.6281 22 6 1.9506 -2.1040 -1.4338 23 6 1.4798 -3.1331 -0.4735 24 6 2.2328 -4.2856 -0.2589 25 6 1.7901 -5.2396 0.6348 26 6 0.6015 -5.0530 1.3172 27 6 -0.1499 -3.9108 1.1079 28 6 0.2828 -2.9508 0.2157 29 1 -0.3934 0.4417 -0.7650 30 1 1.7923 -0.5138 0.8900 31 1 1.5878 2.4586 -1.2242 32 1 1.5615 2.4679 1.2084 33 1 2.5701 0.9376 -2.4886 34 1 2.6521 -1.2331 -5.2993 35 1 3.5749 0.1592 -4.6841 36 1 7.2412 -2.1112 -5.0436 37 1 6.3189 -3.5042 -5.6579 38 1 6.8206 -0.1843 -7.3103 39 1 8.3952 -0.5862 -6.5841 40 1 8.6777 0.3473 -8.8643 41 1 7.6451 -0.9448 -9.5212 42 1 10.5082 -0.5679 -10.2780 43 1 9.9808 -3.7247 -8.6995 44 1 8.4059 -3.3227 -9.4253 45 1 9.1563 -2.9642 -6.4885 46 1 8.1229 -4.2563 -7.1457 47 1 3.1613 -4.4319 -0.7907 48 1 2.3751 -6.1314 0.8050 49 1 0.2586 -5.8023 2.0153 50 1 -1.0775 -3.7703 1.6431 51 1 -0.3049 -2.0595 0.0527 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_12622148_16737258.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 02:29:30 Heat of formation + Delta-G solvation = -65.302554 kcal Electronic energy + Delta-G solvation = -33378.424234 eV Core-core repulsion = 28824.856118 eV Total energy + Delta-G solvation = -4553.568116 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.177 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -42.57091 -41.52409 -40.15516 -39.64956 -38.01410 -37.72603 -36.61804 -34.90982 -32.45529 -32.05215 -31.96315 -31.70499 -31.37568 -29.13897 -26.81387 -25.89919 -24.26937 -23.91407 -23.32459 -22.58485 -22.08633 -21.57745 -21.05757 -20.86388 -18.94127 -18.79066 -18.27028 -17.93390 -17.72431 -17.45161 -16.87888 -16.58041 -16.48095 -16.06097 -15.82744 -15.75155 -15.57974 -15.50601 -15.06482 -14.93160 -14.80833 -14.54871 -14.22575 -14.08510 -13.97140 -13.83065 -13.73207 -13.48578 -13.38797 -13.35425 -13.18678 -12.63772 -12.54643 -12.32771 -12.26401 -12.02432 -11.99417 -11.82387 -11.76386 -11.70069 -11.62318 -11.51536 -11.22326 -10.80981 -10.67772 -10.44533 -9.74972 -9.67532 -9.27340 -4.96976 0.22714 0.65560 0.68695 1.00016 1.02417 1.30266 1.52438 1.61024 1.75513 1.96157 3.02731 3.05996 3.21621 3.33046 3.44123 3.48815 3.55456 3.60203 3.65096 3.68541 3.77767 3.94247 4.03483 4.08955 4.15515 4.20786 4.22480 4.24152 4.25249 4.33238 4.35958 4.40463 4.45798 4.47406 4.58955 4.65971 4.71587 4.81367 4.84966 4.88613 4.92335 4.93882 5.02690 5.03185 5.11662 5.17585 5.23330 5.32094 5.33346 5.38847 5.70724 5.75319 5.78072 5.79368 6.20553 6.46310 6.56282 6.62046 6.64175 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.034 4.034 3 Si 0.684 3.316 4 C -0.244 4.244 5 C 0.064 3.936 6 N -0.367 5.367 7 C 0.147 3.853 8 C 0.445 3.555 9 O -0.474 6.474 10 O -0.354 6.354 11 C 0.074 3.926 12 C -0.089 4.089 13 H 0.087 0.913 14 C -0.112 4.112 15 C -0.152 4.152 16 C 0.102 3.898 17 H 0.055 0.945 18 O -0.569 6.569 19 C -0.111 4.111 20 C -0.111 4.111 21 N -0.253 5.253 22 C 0.140 3.860 23 C -0.024 4.024 24 C -0.089 4.089 25 C -0.126 4.126 26 C -0.110 4.110 27 C -0.125 4.125 28 C -0.091 4.091 29 H 0.373 0.627 30 H 0.116 0.884 31 H -0.259 1.259 32 H -0.255 1.255 33 H 0.180 0.820 34 H 0.131 0.869 35 H 0.141 0.859 36 H 0.073 0.927 37 H 0.074 0.926 38 H 0.074 0.926 39 H 0.064 0.936 40 H 0.067 0.933 41 H 0.073 0.927 42 H 0.379 0.621 43 H 0.074 0.926 44 H 0.072 0.928 45 H 0.070 0.930 46 H 0.075 0.925 47 H 0.124 0.876 48 H 0.124 0.876 49 H 0.123 0.877 50 H 0.125 0.875 51 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.790 4.400 -1.987 5.149 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.334 6.334 2 C -0.145 4.145 3 Si 0.585 3.415 4 C -0.256 4.256 5 C -0.080 4.080 6 N -0.149 5.149 7 C 0.024 3.976 8 C 0.285 3.715 9 O -0.358 6.358 10 O -0.271 6.271 11 C 0.001 3.999 12 C -0.107 4.107 13 H 0.105 0.895 14 C -0.149 4.149 15 C -0.190 4.190 16 C 0.044 3.956 17 H 0.073 0.927 18 O -0.375 6.375 19 C -0.149 4.149 20 C -0.148 4.148 21 N -0.073 5.073 22 C -0.027 4.027 23 C -0.026 4.026 24 C -0.109 4.109 25 C -0.144 4.144 26 C -0.129 4.129 27 C -0.143 4.143 28 C -0.110 4.110 29 H 0.221 0.779 30 H 0.134 0.866 31 H -0.184 1.184 32 H -0.179 1.179 33 H 0.197 0.803 34 H 0.148 0.852 35 H 0.159 0.841 36 H 0.092 0.908 37 H 0.093 0.907 38 H 0.093 0.907 39 H 0.083 0.917 40 H 0.085 0.915 41 H 0.091 0.909 42 H 0.226 0.774 43 H 0.093 0.907 44 H 0.091 0.909 45 H 0.088 0.912 46 H 0.094 0.906 47 H 0.142 0.858 48 H 0.142 0.858 49 H 0.141 0.859 50 H 0.143 0.857 51 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges 2.096 3.243 -2.241 4.465 hybrid contribution -0.927 0.950 0.033 1.328 sum 1.169 4.193 -2.208 4.881 Atomic orbital electron populations 1.86564 1.18184 1.79440 1.49258 1.24237 0.83236 1.10005 0.97037 0.95062 0.91579 0.74272 0.80589 1.20426 1.13279 0.93140 0.98752 1.22323 1.00194 0.95469 0.90028 1.47906 1.48971 1.04604 1.13435 1.21005 0.91615 1.02221 0.82792 1.23453 0.85701 0.81209 0.81164 1.90792 1.68280 1.38029 1.38680 1.86429 1.36756 1.65851 1.38056 1.23204 0.82792 0.95180 0.98750 1.21286 0.97134 0.96633 0.95695 0.89512 1.21530 1.00725 0.95731 0.96931 1.22276 0.98558 0.99905 0.98251 1.21846 0.92792 0.95755 0.85246 0.92699 1.86522 1.79305 1.35246 1.36399 1.21441 1.01135 0.95188 0.97112 1.21480 0.96156 0.99666 0.97532 1.77824 1.19068 1.01398 1.09023 1.20659 0.97328 0.92387 0.92314 1.17764 0.95712 0.92848 0.96228 1.21236 0.99582 0.92627 0.97422 1.21093 0.96866 0.99288 0.97141 1.21297 0.94845 0.97603 0.99149 1.21121 1.00208 0.94185 0.98774 1.21596 0.94956 0.99662 0.94759 0.77917 0.86593 1.18369 1.17905 0.80269 0.85169 0.84107 0.90831 0.90721 0.90739 0.91685 0.91458 0.90877 0.77366 0.90728 0.90884 0.91151 0.90624 0.85792 0.85770 0.85940 0.85718 0.83788 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.22 10.42 -35.23 -0.37 -0.59 16 2 C -0.03 0.00 2.17 36.01 0.08 0.08 16 3 Si 0.68 -1.10 30.84 -169.99 -5.24 -6.35 16 4 C -0.24 -0.28 5.34 -104.76 -0.56 -0.84 16 5 C 0.06 -0.04 9.96 -17.26 -0.17 -0.21 16 6 N -0.37 -0.38 3.40 -62.58 -0.21 -0.59 16 7 C 0.15 -0.35 7.10 -5.19 -0.04 -0.39 16 8 C 0.45 0.31 7.99 36.00 0.29 0.60 16 9 O -0.47 -2.24 15.45 -18.76 -0.29 -2.53 16 10 O -0.35 0.14 9.76 -39.26 -0.38 -0.24 16 11 C 0.07 -0.06 4.84 37.16 0.18 0.12 16 12 C -0.09 0.17 2.43 -90.61 -0.22 -0.05 16 13 H 0.09 -0.13 8.14 -51.93 -0.42 -0.56 16 14 C -0.11 0.25 5.10 -26.73 -0.14 0.11 16 15 C -0.15 0.29 5.54 -26.74 -0.15 0.14 16 16 C 0.10 -0.09 3.47 -26.73 -0.09 -0.18 16 17 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 18 O -0.57 -0.29 13.32 -35.23 -0.47 -0.76 16 19 C -0.11 0.09 5.57 -26.73 -0.15 -0.06 16 20 C -0.11 0.23 5.21 -26.73 -0.14 0.09 16 21 N -0.25 -1.16 11.67 33.43 0.39 -0.77 16 22 C 0.14 0.54 6.66 -82.77 -0.55 -0.02 16 23 C -0.02 -0.09 5.74 -104.89 -0.60 -0.69 16 24 C -0.09 -0.34 9.78 -39.26 -0.38 -0.72 16 25 C -0.13 -0.30 10.03 -39.63 -0.40 -0.70 16 26 C -0.11 -0.21 10.04 -39.52 -0.40 -0.60 16 27 C -0.12 -0.27 10.03 -39.63 -0.40 -0.67 16 28 C -0.09 -0.28 9.05 -39.26 -0.36 -0.63 16 29 H 0.37 -0.92 8.70 45.56 0.40 -0.52 16 30 H 0.12 0.06 7.96 -51.93 -0.41 -0.36 16 31 H -0.26 0.23 6.97 56.52 0.39 0.62 16 32 H -0.25 -0.47 7.11 56.52 0.40 -0.07 16 33 H 0.18 -0.74 6.34 -52.48 -0.33 -1.07 16 34 H 0.13 -0.54 8.14 -51.93 -0.42 -0.96 16 35 H 0.14 -0.92 8.07 -51.93 -0.42 -1.34 16 36 H 0.07 -0.04 8.13 -51.93 -0.42 -0.47 16 37 H 0.07 -0.01 8.13 -51.93 -0.42 -0.43 16 38 H 0.07 -0.16 7.82 -51.93 -0.41 -0.57 16 39 H 0.06 -0.15 8.14 -51.93 -0.42 -0.57 16 40 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 41 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 42 H 0.38 -1.27 9.08 45.56 0.41 -0.86 16 43 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 44 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 45 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 46 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 47 H 0.12 0.49 8.06 -52.49 -0.42 0.07 16 48 H 0.12 0.07 8.06 -52.49 -0.42 -0.36 16 49 H 0.12 -0.02 8.06 -52.49 -0.42 -0.44 16 50 H 0.12 0.05 8.06 -52.48 -0.42 -0.37 16 51 H 0.14 0.38 5.34 -52.49 -0.28 0.10 16 LS Contribution 418.25 15.07 6.30 6.30 Total: 0.00 -10.49 418.25 -11.47 -21.97 By element: Atomic # 1 Polarization: -4.81 SS G_CDS: -7.01 Total: -11.82 kcal Atomic # 6 Polarization: -0.43 SS G_CDS: -4.19 Total: -4.62 kcal Atomic # 7 Polarization: -1.53 SS G_CDS: 0.18 Total: -1.36 kcal Atomic # 8 Polarization: -2.61 SS G_CDS: -1.51 Total: -4.12 kcal Atomic # 14 Polarization: -1.10 SS G_CDS: -5.24 Total: -6.35 kcal Total LS contribution 6.30 Total: 6.30 kcal Total: -10.49 -11.47 -21.97 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_12622148_16737258.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -43.334 kcal (2) G-P(sol) polarization free energy of solvation -10.493 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.828 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.475 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.968 kcal (6) G-S(sol) free energy of system = (1) + (5) -65.303 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds