Wall clock time and date at job start Sat Mar 6 2021 04:11:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86298 * 109.47138 * 2 1 4 4 C 1.50703 * 109.46743 * 119.99545 * 2 1 3 5 5 C 1.34529 * 120.20472 * 249.97554 * 4 2 1 6 6 O 1.33724 * 122.85960 * 180.02562 * 5 4 2 7 7 C 1.34881 * 122.40409 * 359.96187 * 6 5 4 8 8 C 1.38936 * 120.98229 * 180.02562 * 7 6 5 9 9 C 1.50701 * 120.04340 * 0.02562 * 8 7 6 10 10 O 1.45197 * 109.47562 * 179.97438 * 9 8 7 11 11 C 1.34227 * 116.99997 * 179.97438 * 10 9 8 12 12 O 1.20821 * 120.00524 * 359.97438 * 11 10 9 13 13 C 1.50703 * 119.99770 * 180.02562 * 11 10 9 14 14 C 1.50701 * 112.90832 * 311.25230 * 13 11 10 15 15 C 1.38230 * 120.00408 * 102.73920 * 14 13 11 16 16 C 1.38237 * 119.99994 * 179.76735 * 15 14 13 17 17 C 1.38231 * 119.99726 * 0.50743 * 16 15 14 18 18 C 1.38232 * 120.00286 * 359.74496 * 17 16 15 19 19 C 1.38231 * 120.00090 * 0.02562 * 18 17 16 20 20 C 1.53782 * 113.61392 * 179.97438 * 13 11 10 21 21 C 1.53782 * 87.08139 * 270.88197 * 20 13 11 22 22 H 1.09001 * 113.61596 * 89.11524 * 21 20 13 23 23 F 1.39899 * 113.61437 * 220.01750 * 21 20 13 24 24 C 1.53780 * 113.61747 * 82.50014 * 13 11 10 25 25 C 1.37871 * 119.91946 * 180.27092 * 8 7 6 26 26 C 1.38793 * 120.70154 * 359.53961 * 25 8 7 27 27 Br 1.89097 * 119.86092 * 180.21089 * 26 25 8 28 28 C 1.37889 * 120.27432 * 0.44447 * 26 25 8 29 29 C 1.39347 * 119.52553 * 359.78922 * 28 26 25 30 30 C 1.42008 * 120.19716 * 70.00176 * 4 2 1 31 31 O 1.21910 * 121.41060 * 359.97438 * 30 4 2 32 32 H 0.96699 * 113.99559 * 300.00168 * 1 2 3 33 33 H 1.09001 * 109.47173 * 239.99748 * 2 1 3 34 34 H 1.48499 * 109.99880 * 178.67915 * 3 2 1 35 35 H 1.48491 * 110.00000 * 299.99921 * 3 2 1 36 36 H 1.08000 * 118.57011 * 0.02749 * 5 4 2 37 37 H 1.09004 * 109.47124 * 59.98910 * 9 8 7 38 38 H 1.09004 * 109.46619 * 299.99437 * 9 8 7 39 39 H 1.07998 * 119.99819 * 0.02562 * 15 14 13 40 40 H 1.07997 * 119.99778 * 180.23312 * 16 15 14 41 41 H 1.08004 * 120.00130 * 179.72896 * 17 16 15 42 42 H 1.08007 * 120.00034 * 179.97438 * 18 17 16 43 43 H 1.08001 * 120.00332 * 179.97438 * 19 18 17 44 44 H 1.09001 * 113.61456 * 156.33623 * 20 13 11 45 45 H 1.09000 * 113.61460 * 25.43237 * 20 13 11 46 46 H 1.09002 * 113.61575 * 334.57072 * 24 13 11 47 47 H 1.08995 * 113.61809 * 203.66571 * 24 13 11 48 48 H 1.08007 * 119.64849 * 179.72275 * 25 8 7 49 49 H 1.07998 * 120.23343 * 179.77303 * 28 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 2.5322 -0.0170 2.2144 6 8 2.9979 -0.5927 3.3279 7 6 2.8994 -1.9193 3.5512 8 6 3.3932 -2.4865 4.7194 9 6 4.0502 -1.6177 5.7609 10 8 4.4775 -2.4406 6.8782 11 6 5.0859 -1.8150 7.8981 12 8 5.2562 -0.6195 7.8584 13 6 5.5576 -2.6039 9.0923 14 6 4.5032 -3.5341 9.6346 15 6 4.5684 -4.8875 9.3611 16 6 3.6038 -5.7413 9.8625 17 6 2.5682 -5.2401 10.6288 18 6 2.5000 -3.8860 10.8980 19 6 3.4672 -3.0328 10.4005 20 6 6.2339 -1.7424 10.1718 21 6 7.5559 -1.9827 9.4239 22 1 7.7611 -1.2422 8.6508 23 9 8.6473 -2.2019 10.2713 24 6 6.9249 -3.2768 8.8852 25 6 3.2859 -3.8459 4.9226 26 6 2.6795 -4.6584 3.9747 27 35 2.5398 -6.5192 4.2804 28 6 2.1828 -4.1149 2.8088 29 6 2.2899 -2.7428 2.5905 30 6 1.7736 -2.1158 1.3584 31 8 1.2342 -2.7765 0.4873 32 1 -0.3932 0.4417 0.7651 33 1 1.7924 -0.5139 -0.8900 34 1 3.5346 1.7702 0.0322 35 1 1.5616 2.4678 -1.2084 36 1 2.6434 1.0512 2.1000 37 1 3.3388 -0.8700 6.1117 38 1 4.9157 -1.1191 5.3245 39 1 5.3753 -5.2784 8.7590 40 1 3.6569 -6.7992 9.6520 41 1 1.8121 -5.9065 11.0170 42 1 1.6906 -3.4944 11.4964 43 1 3.4138 -1.9748 10.6105 44 1 6.2075 -2.1882 11.1662 45 1 5.9113 -0.7012 10.1649 46 1 7.1603 -3.4745 7.8395 47 1 7.0875 -4.1422 9.5276 48 1 3.6752 -4.2829 5.8303 49 1 1.7143 -4.7483 2.0700 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_12904926_484008.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 04:11:45 Heat of formation + Delta-G solvation = -108.992342 kcal Electronic energy + Delta-G solvation = -41420.533104 eV Core-core repulsion = 35821.676403 eV Total energy + Delta-G solvation = -5598.856701 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 489.040 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -48.63163 -43.38410 -42.47694 -40.59131 -40.08130 -39.84417 -38.77538 -37.86424 -37.45327 -34.64446 -33.69935 -33.16716 -32.25270 -32.00294 -30.73508 -28.81707 -27.50598 -27.38226 -27.07616 -25.83304 -24.48051 -23.84096 -23.35421 -22.74042 -22.42426 -21.04647 -20.53497 -19.55418 -19.04308 -18.89073 -18.24157 -17.99437 -17.81423 -17.65757 -17.48437 -17.18987 -16.74766 -16.64179 -16.43414 -16.31701 -16.21425 -16.11373 -15.63272 -15.59946 -15.48882 -15.31489 -15.15918 -14.99139 -14.55991 -14.45470 -14.29682 -14.20568 -14.09375 -13.94144 -13.81633 -13.70895 -13.46781 -13.18258 -12.85920 -12.76217 -12.48338 -12.46019 -12.35770 -12.16385 -12.09960 -11.87562 -11.86905 -11.55853 -11.52049 -11.48604 -11.18898 -10.72268 -10.47655 -10.44331 -9.95970 -9.83683 -9.59044 -5.35028 -0.84731 -0.72036 -0.01482 0.18487 0.34501 0.36082 0.85029 0.87840 1.00466 1.14794 1.36154 1.44063 1.78492 2.30764 2.61728 2.68793 2.80968 2.86446 2.96299 3.08447 3.14029 3.15796 3.27262 3.33037 3.41923 3.60335 3.69384 3.72465 3.79171 3.83115 3.91337 3.93829 3.94980 4.00893 4.04597 4.13219 4.22629 4.24573 4.34214 4.39753 4.45672 4.48176 4.49532 4.52311 4.55200 4.63420 4.66044 4.76682 4.87081 4.97823 4.98118 4.99389 5.12936 5.41428 5.43636 5.50539 5.69572 5.91704 6.40949 6.41394 6.48583 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.039 4.039 3 Si 0.674 3.326 4 C -0.313 4.313 5 C 0.142 3.858 6 O -0.213 6.213 7 C 0.163 3.837 8 C -0.106 4.106 9 C 0.117 3.883 10 O -0.343 6.343 11 C 0.495 3.505 12 O -0.490 6.490 13 C -0.039 4.039 14 C -0.075 4.075 15 C -0.100 4.100 16 C -0.115 4.115 17 C -0.112 4.112 18 C -0.116 4.116 19 C -0.107 4.107 20 C -0.133 4.133 21 C 0.066 3.934 22 H 0.115 0.885 23 F -0.199 7.199 24 C -0.140 4.140 25 C -0.011 4.011 26 C -0.119 4.119 27 Br -0.023 7.023 28 C 0.003 3.997 29 C -0.211 4.211 30 C 0.433 3.567 31 O -0.439 6.439 32 H 0.376 0.624 33 H 0.121 0.879 34 H -0.248 1.248 35 H -0.243 1.243 36 H 0.202 0.798 37 H 0.097 0.903 38 H 0.096 0.904 39 H 0.126 0.874 40 H 0.126 0.874 41 H 0.124 0.876 42 H 0.125 0.875 43 H 0.122 0.878 44 H 0.114 0.886 45 H 0.100 0.900 46 H 0.092 0.908 47 H 0.118 0.882 48 H 0.161 0.839 49 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.245 2.296 4.586 5.135 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.333 6.333 2 C -0.150 4.150 3 Si 0.574 3.426 4 C -0.316 4.316 5 C 0.077 3.923 6 O -0.116 6.116 7 C 0.117 3.883 8 C -0.108 4.108 9 C 0.043 3.957 10 O -0.260 6.260 11 C 0.337 3.663 12 O -0.377 6.377 13 C -0.040 4.040 14 C -0.075 4.075 15 C -0.118 4.118 16 C -0.133 4.133 17 C -0.130 4.130 18 C -0.134 4.134 19 C -0.125 4.125 20 C -0.170 4.170 21 C 0.030 3.970 22 H 0.133 0.867 23 F -0.179 7.179 24 C -0.178 4.178 25 C -0.031 4.031 26 C -0.199 4.199 27 Br 0.063 6.937 28 C -0.017 4.017 29 C -0.214 4.214 30 C 0.315 3.685 31 O -0.318 6.318 32 H 0.223 0.777 33 H 0.138 0.862 34 H -0.173 1.173 35 H -0.166 1.166 36 H 0.218 0.782 37 H 0.115 0.885 38 H 0.114 0.886 39 H 0.144 0.856 40 H 0.144 0.856 41 H 0.142 0.858 42 H 0.143 0.857 43 H 0.140 0.860 44 H 0.132 0.868 45 H 0.119 0.881 46 H 0.111 0.889 47 H 0.136 0.864 48 H 0.179 0.821 49 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 0.650 2.023 3.389 4.000 hybrid contribution -0.028 -0.152 -0.460 0.485 sum 0.622 1.872 2.929 3.531 Atomic orbital electron populations 1.86614 1.16577 1.81473 1.48674 1.24735 0.85634 1.08632 0.95964 0.95747 0.81008 0.76619 0.89268 1.22081 1.10904 0.97326 1.01260 1.23789 0.88934 0.97478 0.82123 1.83100 1.68828 1.21292 1.38404 1.18862 0.95663 0.80224 0.93519 1.18757 1.04476 0.94009 0.93516 1.21563 0.99991 0.90955 0.83143 1.86417 1.69467 1.42058 1.28043 1.22695 0.74330 0.86613 0.82691 1.90723 1.52365 1.15454 1.79114 1.20174 0.94814 0.96753 0.92235 1.19053 0.95433 0.93304 0.99689 1.21011 0.99203 0.92325 0.99255 1.21190 0.94487 1.00004 0.97642 1.21280 0.98215 0.95565 0.97923 1.21167 0.98751 0.93639 0.99825 1.20994 0.94000 1.00023 0.97518 1.23703 0.93194 1.02053 0.98047 1.23104 0.82844 0.98552 0.92543 0.86716 1.92843 1.56761 1.95723 1.72596 1.23761 0.90821 0.98777 1.04417 1.21057 0.92783 0.90898 0.98331 1.21841 1.07010 0.92873 0.98199 1.96848 1.97441 1.03119 1.96328 1.21149 0.92408 0.93159 0.95000 1.20724 1.07311 0.95013 0.98338 1.18244 0.77589 0.87911 0.84803 1.90784 1.34149 1.66425 1.40401 0.77706 0.86157 1.17291 1.16645 0.78226 0.88544 0.88601 0.85566 0.85576 0.85756 0.85674 0.86005 0.86804 0.88140 0.88948 0.86410 0.82118 0.82656 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.39 12.88 -35.23 -0.45 -0.84 16 2 C -0.04 0.01 2.46 36.01 0.09 0.10 16 3 Si 0.67 -2.06 29.86 -169.99 -5.08 -7.13 16 4 C -0.31 0.13 5.32 -104.49 -0.56 -0.43 16 5 C 0.14 -0.46 9.99 29.42 0.29 -0.16 16 6 O -0.21 0.45 9.21 5.62 0.05 0.50 16 7 C 0.16 -0.08 6.74 -38.49 -0.26 -0.34 16 8 C -0.11 0.11 5.89 -104.50 -0.62 -0.50 16 9 C 0.12 -0.20 5.38 36.01 0.19 0.00 16 10 O -0.34 0.33 8.51 -39.25 -0.33 0.00 16 11 C 0.49 -0.16 6.75 36.01 0.24 0.09 16 12 O -0.49 -0.80 15.49 -18.75 -0.29 -1.09 16 13 C -0.04 0.06 1.03 -156.00 -0.16 -0.10 16 14 C -0.07 0.09 4.69 -104.62 -0.49 -0.40 16 15 C -0.10 0.16 9.02 -39.58 -0.36 -0.20 16 16 C -0.12 0.16 10.05 -39.58 -0.40 -0.24 16 17 C -0.11 0.13 10.05 -39.59 -0.40 -0.27 16 18 C -0.12 0.12 10.05 -39.59 -0.40 -0.28 16 19 C -0.11 0.09 9.39 -39.58 -0.37 -0.28 16 20 C -0.13 0.20 6.56 -25.92 -0.17 0.03 16 21 C 0.07 -0.07 5.32 -25.95 -0.14 -0.20 16 22 H 0.12 -0.17 8.06 -51.93 -0.42 -0.58 16 23 F -0.20 -0.31 17.41 2.25 0.04 -0.27 16 24 C -0.14 0.34 6.09 -25.95 -0.16 0.18 16 25 C -0.01 0.01 9.10 -39.51 -0.36 -0.35 16 26 C -0.12 -0.02 6.22 -39.50 -0.25 -0.26 16 27 Br -0.02 0.00 33.69 -68.01 -2.29 -2.30 16 28 C 0.00 0.00 9.40 -39.30 -0.37 -0.37 16 29 C -0.21 -0.25 5.89 -104.84 -0.62 -0.87 16 30 C 0.43 1.14 6.98 -34.33 -0.24 0.90 16 31 O -0.44 -2.71 16.93 5.00 0.08 -2.62 16 32 H 0.38 -1.52 8.70 45.56 0.40 -1.12 16 33 H 0.12 0.16 7.96 -51.93 -0.41 -0.25 16 34 H -0.25 0.34 7.11 56.52 0.40 0.74 16 35 H -0.24 -0.17 7.11 56.52 0.40 0.23 16 36 H 0.20 -1.41 4.77 -52.49 -0.25 -1.66 16 37 H 0.10 -0.20 8.14 -51.93 -0.42 -0.63 16 38 H 0.10 -0.22 8.13 -51.93 -0.42 -0.64 16 39 H 0.13 -0.39 7.03 -52.49 -0.37 -0.76 16 40 H 0.13 -0.36 8.06 -52.49 -0.42 -0.78 16 41 H 0.12 -0.32 8.06 -52.48 -0.42 -0.74 16 42 H 0.13 -0.30 8.06 -52.48 -0.42 -0.73 16 43 H 0.12 -0.20 8.03 -52.49 -0.42 -0.62 16 44 H 0.11 -0.22 8.09 -51.93 -0.42 -0.64 16 45 H 0.10 -0.12 7.44 -51.93 -0.39 -0.51 16 46 H 0.09 -0.31 8.09 -51.93 -0.42 -0.73 16 47 H 0.12 -0.35 7.45 -51.93 -0.39 -0.73 16 48 H 0.16 -0.27 6.96 -52.48 -0.37 -0.63 16 49 H 0.16 0.18 7.81 -52.49 -0.41 -0.23 16 LS Contribution 441.36 15.07 6.65 6.65 Total: 0.00 -9.78 441.36 -12.27 -22.05 By element: Atomic # 1 Polarization: -5.83 SS G_CDS: -5.18 Total: -11.01 kcal Atomic # 6 Polarization: 1.54 SS G_CDS: -5.48 Total: -3.94 kcal Atomic # 8 Polarization: -3.11 SS G_CDS: -0.94 Total: -4.05 kcal Atomic # 9 Polarization: -0.31 SS G_CDS: 0.04 Total: -0.27 kcal Atomic # 14 Polarization: -2.06 SS G_CDS: -5.08 Total: -7.13 kcal Atomic # 35 Polarization: 0.00 SS G_CDS: -2.29 Total: -2.30 kcal Total LS contribution 6.65 Total: 6.65 kcal Total: -9.78 -12.27 -22.05 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_12904926_484008.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -86.939 kcal (2) G-P(sol) polarization free energy of solvation -9.778 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -96.717 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.275 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.053 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.992 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds