Wall clock time and date at job start Sat Mar 6 2021 04:17:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86304 * 109.47203 * 2 1 4 4 H 1.48501 * 109.46818 * 299.99808 * 3 2 1 5 5 H 1.48499 * 109.47154 * 59.99741 * 3 2 1 6 6 H 1.48497 * 109.47479 * 180.02562 * 3 2 1 7 7 C 1.50702 * 109.47333 * 240.00042 * 2 1 3 8 8 C 1.34533 * 120.20724 * 119.97842 * 7 2 1 9 9 O 1.33717 * 122.85218 * 180.02562 * 8 7 2 10 10 C 1.34879 * 122.40807 * 359.95795 * 9 8 7 11 11 C 1.40415 * 119.68354 * 0.04031 * 10 9 8 12 12 C 1.39390 * 120.23967 * 179.97438 * 11 10 9 13 13 C 1.37841 * 119.52366 * 0.02562 * 12 11 10 14 14 Br 1.89101 * 119.86136 * 180.02562 * 13 12 11 15 15 C 1.38838 * 120.27797 * 359.78183 * 13 12 11 16 16 C 1.37824 * 120.70416 * 0.45675 * 15 13 12 17 17 C 1.50703 * 120.04269 * 179.80197 * 16 15 13 18 18 O 1.42893 * 109.46784 * 359.72179 * 17 16 15 19 19 C 1.35257 * 116.99912 * 179.97438 * 18 17 16 20 20 O 1.21780 * 119.99767 * 0.27680 * 19 18 17 21 21 C 1.40015 * 120.00161 * 180.02562 * 19 18 17 22 22 S 1.55355 * 119.99917 * 180.02562 * 21 19 18 23 23 O 1.52197 * 102.99944 * 286.87377 * 22 21 19 24 24 C 1.76197 * 103.00071 * 179.97438 * 22 21 19 25 25 C 1.38231 * 119.98829 * 269.72587 * 24 22 21 26 26 C 1.38223 * 120.01299 * 179.76672 * 25 24 22 27 27 C 1.38352 * 119.98354 * 0.52843 * 26 25 24 28 28 Cl 1.73603 * 120.00898 * 179.70374 * 27 26 25 29 29 C 1.38346 * 119.97294 * 359.72533 * 27 26 25 30 30 C 1.38215 * 119.99115 * 359.97438 * 29 27 26 31 31 C 1.42002 * 120.19752 * 299.99768 * 7 2 1 32 32 O 1.21910 * 121.41031 * 359.95507 * 31 7 2 33 33 H 0.96701 * 113.99255 * 60.00415 * 1 2 3 34 34 H 1.09001 * 109.47313 * 119.99275 * 2 1 3 35 35 H 1.08002 * 118.57510 * 0.02562 * 8 7 2 36 36 H 1.08001 * 120.23445 * 180.02562 * 12 11 10 37 37 H 1.08000 * 119.65167 * 180.25836 * 15 13 12 38 38 H 1.08997 * 109.47036 * 239.72002 * 17 16 15 39 39 H 1.08998 * 109.46923 * 119.72363 * 17 16 15 40 40 H 1.07999 * 120.00009 * 0.02562 * 21 19 18 41 41 H 1.07997 * 119.99728 * 0.02562 * 25 24 22 42 42 H 1.07999 * 120.00342 * 180.25629 * 26 25 24 43 43 H 1.08011 * 120.00390 * 179.97438 * 29 27 26 44 44 H 1.08000 * 119.99566 * 179.97438 * 30 29 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 1 1.5551 2.4564 -1.2126 5 1 1.5550 2.4565 1.2125 6 1 3.5350 1.7566 -0.0006 7 6 1.9314 -0.7104 -1.2305 8 6 2.7048 -0.0605 -2.1189 9 8 3.1787 -0.6385 -3.2276 10 6 2.9171 -1.9240 -3.5411 11 6 2.1191 -2.6999 -2.6850 12 6 1.8409 -4.0295 -2.9979 13 6 2.3552 -4.5773 -4.1535 14 35 1.9832 -6.3798 -4.5876 15 6 3.1410 -3.8097 -5.0025 16 6 3.4267 -2.4956 -4.7010 17 6 4.2849 -1.6774 -5.6311 18 8 4.6827 -2.4817 -6.7432 19 6 5.4626 -1.8934 -7.6787 20 8 5.7981 -0.7301 -7.5477 21 6 5.8884 -2.6235 -8.7950 22 16 6.7847 -1.9479 -9.8691 23 8 5.8155 -1.0227 -10.5910 24 6 7.0450 -3.2404 -11.0380 25 6 8.1280 -4.0884 -10.9006 26 6 8.3301 -5.1054 -11.8145 27 6 7.4543 -5.2678 -12.8732 28 17 7.7118 -6.5402 -14.0257 29 6 6.3735 -4.4155 -13.0131 30 6 6.1690 -3.4027 -12.0951 31 6 1.5910 -2.0699 -1.4593 32 8 0.8929 -2.6906 -0.6760 33 1 -0.3932 0.4417 -0.7651 34 1 1.7924 -0.5137 0.8900 35 1 2.9536 0.9731 -1.9285 36 1 1.2267 -4.6260 -2.3396 37 1 3.5353 -4.2480 -5.9074 38 1 5.1703 -1.3310 -5.0980 39 1 3.7168 -0.8186 -5.9885 40 1 5.5938 -3.6562 -8.9093 41 1 8.8141 -3.9588 -10.0767 42 1 9.1739 -5.7704 -11.7047 43 1 5.6897 -4.5416 -13.8396 44 1 5.3256 -2.7371 -12.2045 RHF calculation, no. of doubly occupied orbitals= 76 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_12912122_484008.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 04:17:04 Heat of formation + Delta-G solvation = -193.402293 kcal Electronic energy + Delta-G solvation = -37641.518046 eV Core-core repulsion = 32074.662912 eV Total energy + Delta-G solvation = -5566.855135 eV No. of doubly occupied orbitals = 76 Molecular weight (most abundant/longest-lived isotopes) = 512.951 amu Computer time = 1.35 seconds Orbital eigenvalues (eV) -42.35799 -39.27132 -39.13105 -38.69061 -38.38554 -37.02504 -36.28105 -35.18122 -33.58155 -32.55900 -32.00973 -31.95263 -30.63439 -30.27275 -29.69822 -28.53397 -26.60628 -26.41346 -24.79264 -23.49433 -22.42502 -22.39321 -21.39689 -20.31470 -19.67875 -18.52662 -18.10497 -17.52955 -16.93068 -16.79895 -16.34677 -16.15158 -15.67845 -15.56068 -15.54227 -15.31929 -15.25377 -15.04386 -14.98467 -14.89542 -14.33458 -14.22444 -13.80621 -13.75280 -13.52152 -13.41291 -13.29915 -13.17652 -13.10141 -12.58538 -12.40506 -12.13928 -11.94880 -11.72753 -11.66453 -11.46760 -11.31413 -11.24697 -11.13484 -11.03216 -10.82195 -10.57064 -10.51527 -10.46001 -10.34001 -9.87757 -9.78241 -9.58866 -9.20279 -8.89878 -8.69838 -8.53669 -8.52160 -8.45628 -7.30252 -5.94264 0.16145 0.33408 1.01775 1.32971 1.33926 1.58066 1.65451 1.79869 1.87054 2.00831 2.25191 2.35545 2.46447 3.31983 3.33176 3.61616 3.82421 3.92413 3.92990 4.05972 4.28106 4.33606 4.44161 4.68300 4.81556 4.87823 5.00403 5.08962 5.12399 5.15385 5.19900 5.32870 5.42938 5.57634 5.59593 5.68285 5.71563 5.77682 5.81312 5.94107 5.95256 6.11220 6.18544 6.34110 6.38949 6.51153 6.74334 6.91606 7.16727 7.18594 7.27988 7.32995 7.45255 8.08562 9.64189 Molecular weight = 512.95amu Principal moments of inertia in cm(-1) A = 0.006316 B = 0.001235 C = 0.001052 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 4432.079295 B =22660.550638 C =26613.992000 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.047 4.047 3 Si 0.923 3.077 4 H -0.242 1.242 5 H -0.240 1.240 6 H -0.241 1.241 7 C -0.324 4.324 8 C 0.137 3.863 9 O -0.206 6.206 10 C 0.155 3.845 11 C -0.217 4.217 12 C -0.008 4.008 13 C -0.117 4.117 14 Br -0.034 7.034 15 C -0.011 4.011 16 C -0.086 4.086 17 C 0.117 3.883 18 O -0.375 6.375 19 C 0.545 3.455 20 O -0.616 6.616 21 C -1.027 5.027 22 S 1.466 4.534 23 O -0.925 6.925 24 C -0.418 4.418 25 C -0.045 4.045 26 C -0.135 4.135 27 C -0.022 4.022 28 Cl -0.089 7.089 29 C -0.133 4.133 30 C -0.044 4.044 31 C 0.438 3.562 32 O -0.446 6.446 33 H 0.373 0.627 34 H 0.121 0.879 35 H 0.191 0.809 36 H 0.152 0.848 37 H 0.164 0.836 38 H 0.078 0.922 39 H 0.076 0.924 40 H 0.110 0.890 41 H 0.140 0.860 42 H 0.129 0.871 43 H 0.125 0.875 44 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.980 -1.599 12.390 12.531 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.332 6.332 2 C -0.158 4.158 3 Si 0.744 3.256 4 H -0.166 1.166 5 H -0.163 1.163 6 H -0.165 1.165 7 C -0.327 4.327 8 C 0.071 3.929 9 O -0.109 6.109 10 C 0.110 3.890 11 C -0.219 4.219 12 C -0.028 4.028 13 C -0.197 4.197 14 Br 0.051 6.949 15 C -0.030 4.030 16 C -0.088 4.088 17 C 0.041 3.959 18 O -0.295 6.295 19 C 0.410 3.590 20 O -0.520 6.520 21 C -1.154 5.154 22 S 1.667 4.333 23 O -0.921 6.921 24 C -0.510 4.510 25 C -0.064 4.064 26 C -0.155 4.155 27 C -0.049 4.049 28 Cl -0.060 7.060 29 C -0.153 4.153 30 C -0.063 4.063 31 C 0.321 3.679 32 O -0.325 6.325 33 H 0.219 0.781 34 H 0.138 0.862 35 H 0.208 0.792 36 H 0.169 0.831 37 H 0.182 0.818 38 H 0.096 0.904 39 H 0.094 0.906 40 H 0.129 0.871 41 H 0.158 0.842 42 H 0.147 0.853 43 H 0.143 0.857 44 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges -0.570 -0.929 12.955 13.000 hybrid contribution -2.424 -1.548 -0.924 3.021 sum -2.994 -2.477 12.031 12.643 Atomic orbital electron populations 1.86582 1.16773 1.81451 1.48402 1.24569 0.85430 1.08957 0.96848 0.86135 0.81044 0.75600 0.82792 1.16560 1.16346 1.16482 1.22019 1.09272 0.98884 1.02542 1.23768 0.89741 0.96947 0.82420 1.83145 1.64360 1.24895 1.38508 1.18998 0.95280 0.80899 0.93847 1.20656 1.05512 0.96208 0.99559 1.20976 0.94952 0.92786 0.94106 1.21811 1.05561 0.93337 0.98996 1.96751 1.94379 1.09880 1.93865 1.21216 0.91912 0.91399 0.98476 1.19261 1.01171 0.94742 0.93622 1.20713 0.96865 0.91941 0.86365 1.86203 1.66715 1.44387 1.32221 1.17774 0.75655 0.84765 0.80804 1.90712 1.62927 1.18744 1.79640 1.26249 1.54636 1.13274 1.21284 1.66765 1.09298 0.77229 0.80052 1.94484 1.66886 1.57563 1.73134 1.28856 0.98350 1.13653 1.10138 1.20865 0.96089 0.92256 0.97186 1.21095 0.99619 1.00031 0.94711 1.20961 0.98262 0.92442 0.93224 1.98335 1.96448 1.51339 1.59874 1.21137 0.97273 0.96118 1.00800 1.21245 0.98087 0.94821 0.92182 1.18147 0.79146 0.86751 0.83893 1.90737 1.30780 1.65796 1.45220 0.78083 0.86170 0.79245 0.83053 0.81832 0.90380 0.90575 0.87137 0.84237 0.85280 0.85684 0.84542 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -4.96 12.52 -36.36 -0.46 -5.41 16 2 C -0.05 -0.39 2.54 36.01 0.09 -0.30 16 3 Si 0.92 5.34 25.09 -169.99 -4.26 1.08 16 4 H -0.24 -1.33 7.11 56.52 0.40 -0.92 16 5 H -0.24 -1.62 7.11 56.52 0.40 -1.21 16 6 H -0.24 -1.36 7.11 56.52 0.40 -0.96 16 7 C -0.32 -3.24 5.40 -104.49 -0.56 -3.81 16 8 C 0.14 1.22 10.00 29.42 0.29 1.52 16 9 O -0.21 -2.43 9.21 5.65 0.05 -2.38 16 10 C 0.16 2.11 6.74 -38.48 -0.26 1.85 16 11 C -0.22 -2.88 5.89 -104.84 -0.62 -3.49 16 12 C -0.01 -0.11 9.40 -39.30 -0.37 -0.48 16 13 C -0.12 -1.58 6.22 -39.50 -0.25 -1.83 16 14 Br -0.03 -0.42 33.69 -68.01 -2.29 -2.71 16 15 C -0.01 -0.16 9.10 -39.51 -0.36 -0.52 16 16 C -0.09 -1.34 5.89 -104.49 -0.62 -1.95 16 17 C 0.12 2.18 5.30 36.01 0.19 2.37 16 18 O -0.37 -8.64 8.58 -42.05 -0.36 -9.00 16 19 C 0.54 14.55 7.63 31.40 0.24 14.79 16 20 O -0.62 -17.35 16.06 -19.47 -0.31 -17.66 16 21 C -1.03 -26.74 8.93 31.40 0.28 -26.46 16 22 S 1.47 33.64 12.78 -107.50 -1.37 32.26 16 23 O -0.92 -27.44 17.08 -35.23 -0.60 -28.04 16 24 C -0.42 -8.27 5.35 -39.58 -0.21 -8.48 16 25 C -0.04 -0.71 9.75 -39.59 -0.39 -1.09 16 26 C -0.13 -1.99 9.83 -39.54 -0.39 -2.38 16 27 C -0.02 -0.35 6.32 -39.50 -0.25 -0.60 16 28 Cl -0.09 -1.19 28.96 -51.86 -1.50 -2.69 16 29 C -0.13 -2.28 9.83 -39.55 -0.39 -2.67 16 30 C -0.04 -0.89 9.46 -39.59 -0.37 -1.27 16 31 C 0.44 5.71 6.91 -34.33 -0.24 5.47 16 32 O -0.45 -6.88 16.66 3.87 0.06 -6.82 16 33 H 0.37 2.14 8.70 45.56 0.40 2.54 16 34 H 0.12 0.97 7.96 -51.93 -0.41 0.56 16 35 H 0.19 1.06 4.66 -52.49 -0.24 0.81 16 36 H 0.15 1.81 7.81 -52.49 -0.41 1.40 16 37 H 0.16 2.67 6.97 -52.49 -0.37 2.30 16 38 H 0.08 1.39 8.13 -51.93 -0.42 0.97 16 39 H 0.08 1.45 8.13 -51.93 -0.42 1.03 16 40 H 0.11 2.93 7.87 -45.46 -0.36 2.57 16 41 H 0.14 1.71 8.06 -52.49 -0.42 1.28 16 42 H 0.13 1.52 8.06 -52.49 -0.42 1.10 16 43 H 0.13 1.87 8.06 -52.48 -0.42 1.44 16 44 H 0.14 3.03 7.24 -52.49 -0.38 2.65 16 LS Contribution 434.07 15.07 6.54 6.54 Total: -1.00 -37.23 434.07 -11.36 -48.59 By element: Atomic # 1 Polarization: 18.25 SS G_CDS: -2.68 Total: 15.57 kcal Atomic # 6 Polarization: -25.14 SS G_CDS: -4.17 Total: -29.31 kcal Atomic # 8 Polarization: -67.71 SS G_CDS: -1.61 Total: -69.32 kcal Atomic # 14 Polarization: 5.34 SS G_CDS: -4.26 Total: 1.08 kcal Atomic # 16 Polarization: 33.64 SS G_CDS: -1.37 Total: 32.26 kcal Atomic # 17 Polarization: -1.19 SS G_CDS: -1.50 Total: -2.69 kcal Atomic # 35 Polarization: -0.42 SS G_CDS: -2.29 Total: -2.71 kcal Total LS contribution 6.54 Total: 6.54 kcal Total: -37.23 -11.36 -48.59 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_12912122_484008.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -144.813 kcal (2) G-P(sol) polarization free energy of solvation -37.231 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -182.043 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.359 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -48.590 kcal (6) G-S(sol) free energy of system = (1) + (5) -193.402 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.35 seconds