Wall clock time and date at job start Sat Mar 6 2021 02:48:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 C 1.52996 * 109.47449 * 2 1 4 4 C 1.53003 * 109.47191 * 239.99613 * 2 1 3 5 5 O 1.42905 * 109.46924 * 119.99659 * 2 1 3 6 6 C 1.42904 * 113.99955 * 60.00252 * 5 2 1 7 7 H 1.08999 * 112.84801 * 18.79664 * 6 5 2 8 8 C 1.53778 * 113.61684 * 150.00041 * 6 5 2 9 9 C 1.53786 * 87.08211 * 140.06110 * 8 6 5 10 10 H 1.09006 * 113.61053 * 89.19743 * 9 8 6 11 11 C 1.52994 * 113.61518 * 220.01885 * 9 8 6 12 12 O 1.45202 * 109.46919 * 185.00393 * 11 9 8 13 13 C 1.34849 * 116.99677 * 180.02562 * 12 11 9 14 14 O 1.21573 * 120.00092 * 359.97438 * 13 12 11 15 15 C 1.46896 * 119.99870 * 180.27068 * 13 12 11 16 16 C 1.35944 * 125.43555 * 179.74492 * 15 13 12 17 17 C 1.41562 * 107.72181 * 180.02562 * 16 15 13 18 18 C 1.40084 * 133.37251 * 180.02562 * 17 16 15 19 19 C 1.36460 * 119.82991 * 179.97438 * 18 17 16 20 20 C 1.38906 * 120.62200 * 0.02562 * 19 18 17 21 21 C 1.50693 * 119.67518 * 179.97438 * 20 19 18 22 22 O 1.42899 * 109.47449 * 119.98123 * 21 20 19 23 23 Si 1.86301 * 109.47532 * 359.97416 * 21 20 19 24 24 C 1.37715 * 120.64547 * 359.97284 * 20 19 18 25 25 C 1.39186 * 119.81069 * 0.02562 * 24 20 19 26 26 N 1.37485 * 133.16914 * 180.34556 * 25 24 20 27 27 C 1.53785 * 87.08031 * 334.56724 * 9 8 6 28 28 H 1.09010 * 109.47003 * 300.00506 * 1 2 3 29 29 H 1.09002 * 109.47078 * 60.00046 * 1 2 3 30 30 H 1.08994 * 109.47620 * 179.97438 * 1 2 3 31 31 H 1.08999 * 109.47181 * 179.97438 * 3 2 1 32 32 H 1.08996 * 109.47326 * 299.99885 * 3 2 1 33 33 H 1.08997 * 109.47637 * 59.99940 * 3 2 1 34 34 H 1.09002 * 109.46985 * 299.99858 * 4 2 1 35 35 H 1.08996 * 109.46764 * 60.00618 * 4 2 1 36 36 H 1.08999 * 109.47157 * 180.02562 * 4 2 1 37 37 H 1.08991 * 113.61593 * 25.51382 * 8 6 5 38 38 H 1.09001 * 113.68753 * 254.61727 * 8 6 5 39 39 H 1.08998 * 109.47242 * 64.99822 * 11 9 8 40 40 H 1.09004 * 109.46797 * 304.99638 * 11 9 8 41 41 H 1.07995 * 126.14446 * 359.96838 * 16 15 13 42 42 H 1.08002 * 120.08430 * 359.94837 * 18 17 16 43 43 H 1.08002 * 119.69291 * 180.02562 * 19 18 17 44 44 H 1.09006 * 109.46628 * 239.97605 * 21 20 19 45 45 H 0.96705 * 113.99390 * 299.99880 * 22 21 20 46 46 H 1.48505 * 109.99615 * 58.68156 * 23 21 20 47 47 H 1.48497 * 110.00201 * 180.02562 * 23 21 20 48 48 H 1.08004 * 120.08633 * 180.02562 * 24 20 19 49 49 H 0.96996 * 125.60545 * 359.97345 * 26 25 24 50 50 H 1.09001 * 113.61176 * 139.97927 * 27 9 8 51 51 H 1.08996 * 113.61627 * 270.88389 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0062 -0.6736 1.1669 6 6 1.5846 -2.0355 1.2646 7 1 1.2521 -2.4451 0.3108 8 6 2.5835 -2.9379 2.0080 9 6 1.3664 -3.6133 2.6617 10 1 0.9752 -4.4553 2.0904 11 6 1.5698 -3.9428 4.1418 12 8 0.4203 -4.6795 4.6360 13 6 0.4411 -5.0485 5.9329 14 8 1.3944 -4.7626 6.6310 15 6 -0.6852 -5.8018 6.5003 16 6 -0.7773 -6.2323 7.7865 17 6 -2.0101 -6.9140 7.9255 18 6 -2.6371 -7.5587 8.9996 19 6 -3.8589 -8.1402 8.8226 20 6 -4.4890 -8.1001 7.5853 21 6 -5.8378 -8.7498 7.4136 22 8 -6.7926 -7.7660 7.0103 23 14 -6.3721 -9.5081 9.0293 24 6 -3.8932 -7.4724 6.5141 25 6 -2.6472 -6.8719 6.6695 26 7 -1.8221 -6.1820 5.8130 27 6 0.6066 -2.2979 2.4221 28 1 -0.3633 0.5140 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3634 -1.0276 -0.0005 31 1 3.1300 1.4424 0.0005 32 1 1.6768 1.9563 -0.8899 33 1 1.6768 1.9564 0.8899 34 1 1.6767 -1.7490 -1.2491 35 1 1.6767 -0.2075 -2.1392 36 1 3.1300 -0.7217 -1.2490 37 1 3.2159 -2.4000 2.7142 38 1 3.1493 -3.5988 1.3514 39 1 1.6796 -3.0180 4.7082 40 1 2.4678 -4.5494 4.2589 41 1 -0.0416 -6.0821 8.5627 42 1 -2.1546 -7.5958 9.9651 43 1 -4.3405 -8.6363 9.6523 44 1 -5.7725 -9.5266 6.6517 45 1 -6.9027 -7.0425 7.6424 46 1 -6.4341 -8.4647 10.0841 47 1 -7.7008 -10.1527 8.8730 48 1 -4.3914 -7.4462 5.5562 49 1 -2.0071 -5.9942 4.8796 50 1 -0.4243 -2.4418 2.0986 51 1 0.6986 -1.5851 3.2415 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_13158384_14598394.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 02:48:20 Heat of formation + Delta-G solvation = -80.980651 kcal Electronic energy + Delta-G solvation = -31195.167523 eV Core-core repulsion = 26834.571605 eV Total energy + Delta-G solvation = -4360.595918 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.182 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -42.73839 -41.40011 -40.74674 -39.17013 -38.57143 -37.30512 -37.01122 -33.95030 -33.34911 -31.46168 -30.45853 -29.84448 -28.45617 -28.40106 -27.09564 -26.73067 -24.87593 -23.69565 -23.11288 -22.10575 -21.42538 -20.92721 -20.69293 -19.49346 -18.64507 -18.28768 -17.83455 -17.57134 -17.38409 -16.90414 -16.56448 -16.31122 -16.01917 -15.91974 -15.62149 -15.49724 -15.24799 -14.81511 -14.72229 -14.67680 -14.54703 -14.33002 -14.01807 -14.00792 -13.55429 -13.40194 -13.25043 -13.18611 -13.09980 -12.88131 -12.72932 -12.62540 -12.58069 -12.46648 -12.28547 -12.08309 -12.02193 -11.86078 -11.65229 -11.58913 -11.41215 -11.25973 -11.01650 -10.63234 -10.41518 -9.40039 -8.89341 -4.94682 -0.48854 0.48397 0.79914 1.26417 1.35276 1.61457 1.84763 1.98701 2.00345 2.64707 2.71797 3.28948 3.33710 3.42997 3.52897 3.58159 3.65870 3.67207 3.75824 3.83286 3.90226 3.95345 4.00579 4.03204 4.12642 4.18392 4.21315 4.31977 4.40096 4.41778 4.46573 4.50284 4.57241 4.59852 4.66179 4.69215 4.70793 4.75528 4.81734 4.83240 4.85629 4.90014 4.91152 5.03576 5.05245 5.17600 5.24187 5.26116 5.30538 5.31466 5.36129 5.48058 5.52339 5.92951 6.25575 6.35133 6.37819 6.59682 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C 0.104 3.896 3 C -0.139 4.139 4 C -0.179 4.179 5 O -0.360 6.360 6 C 0.062 3.938 7 H 0.093 0.907 8 C -0.126 4.126 9 C -0.112 4.112 10 H 0.105 0.895 11 C 0.083 3.917 12 O -0.357 6.357 13 C 0.532 3.468 14 O -0.487 6.487 15 C 0.031 3.969 16 C -0.091 4.091 17 C -0.121 4.121 18 C -0.047 4.047 19 C -0.146 4.146 20 C -0.083 4.083 21 C -0.076 4.076 22 O -0.530 6.530 23 Si 0.690 3.310 24 C -0.104 4.104 25 C 0.120 3.880 26 N -0.567 5.567 27 C -0.149 4.149 28 H 0.064 0.936 29 H 0.066 0.934 30 H 0.058 0.942 31 H 0.064 0.936 32 H 0.071 0.929 33 H 0.063 0.937 34 H 0.059 0.941 35 H 0.068 0.932 36 H 0.065 0.935 37 H 0.095 0.905 38 H 0.079 0.921 39 H 0.078 0.922 40 H 0.078 0.922 41 H 0.162 0.838 42 H 0.133 0.867 43 H 0.131 0.869 44 H 0.120 0.880 45 H 0.377 0.623 46 H -0.259 1.259 47 H -0.258 1.258 48 H 0.129 0.871 49 H 0.426 0.574 50 H 0.072 0.928 51 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.217 -1.348 -2.154 2.550 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.065 3.935 3 C -0.196 4.196 4 C -0.236 4.236 5 O -0.280 6.280 6 C 0.005 3.995 7 H 0.111 0.889 8 C -0.164 4.164 9 C -0.131 4.131 10 H 0.123 0.877 11 C 0.009 3.991 12 O -0.275 6.275 13 C 0.376 3.624 14 O -0.374 6.374 15 C -0.077 4.077 16 C -0.117 4.117 17 C -0.125 4.125 18 C -0.066 4.066 19 C -0.164 4.164 20 C -0.085 4.085 21 C -0.185 4.185 22 O -0.337 6.337 23 Si 0.591 3.409 24 C -0.125 4.125 25 C 0.009 3.991 26 N -0.171 5.171 27 C -0.187 4.187 28 H 0.083 0.917 29 H 0.085 0.915 30 H 0.077 0.923 31 H 0.083 0.917 32 H 0.090 0.910 33 H 0.082 0.918 34 H 0.077 0.923 35 H 0.087 0.913 36 H 0.084 0.916 37 H 0.114 0.886 38 H 0.098 0.902 39 H 0.096 0.904 40 H 0.096 0.904 41 H 0.179 0.821 42 H 0.151 0.849 43 H 0.148 0.852 44 H 0.137 0.863 45 H 0.225 0.775 46 H -0.184 1.184 47 H -0.183 1.183 48 H 0.147 0.853 49 H 0.265 0.735 50 H 0.091 0.909 51 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -0.388 -1.461 -1.891 2.420 hybrid contribution -0.434 1.190 -0.925 1.569 sum -0.822 -0.270 -2.816 2.946 Atomic orbital electron populations 1.22469 0.95469 1.02476 1.02944 1.21550 0.93238 0.93316 0.85355 1.21768 1.02044 0.93175 1.02641 1.22471 1.02365 1.00813 0.97986 1.88045 1.73787 1.23201 1.42937 1.23552 0.95521 0.82940 0.97535 0.88940 1.23232 0.96298 0.97322 0.99528 1.22378 0.98935 0.98123 0.93621 0.87679 1.23158 0.86122 0.95920 0.93879 1.86531 1.46245 1.68035 1.26643 1.19902 0.85112 0.76921 0.80508 1.90945 1.33464 1.52225 1.60747 1.19003 0.88661 1.07130 0.92903 1.20998 0.97303 0.99008 0.94387 1.18174 0.95864 1.04645 0.93813 1.20373 0.94020 0.94684 0.97530 1.20492 0.96455 1.02854 0.96648 1.20012 0.96584 0.98729 0.93168 1.25068 0.86486 0.94460 1.12524 1.86601 1.60861 1.37226 1.48983 0.94845 0.84808 0.86098 0.75173 1.19886 0.92173 1.00482 0.99915 1.18349 0.93314 0.97422 0.89993 1.41916 1.15330 1.47206 1.12610 1.23647 0.99030 0.96260 0.99750 0.91671 0.91504 0.92334 0.91723 0.91037 0.91751 0.92256 0.91322 0.91562 0.88602 0.90224 0.90388 0.90419 0.82052 0.84867 0.85184 0.86258 0.77547 1.18390 1.18324 0.85345 0.73466 0.90924 0.88987 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.13 8.38 37.15 0.31 0.44 16 2 C 0.10 0.00 1.11 -90.62 -0.10 -0.10 16 3 C -0.14 0.05 8.84 37.16 0.33 0.38 16 4 C -0.18 0.17 8.38 37.16 0.31 0.48 16 5 O -0.36 -0.52 10.00 -35.23 -0.35 -0.87 16 6 C 0.06 -0.03 2.82 -25.92 -0.07 -0.10 16 7 H 0.09 -0.13 5.54 -51.93 -0.29 -0.42 16 8 C -0.13 0.14 7.47 -25.92 -0.19 -0.05 16 9 C -0.11 0.14 4.02 -89.81 -0.36 -0.22 16 10 H 0.11 -0.20 8.14 -51.93 -0.42 -0.63 16 11 C 0.08 0.01 5.31 37.15 0.20 0.21 16 12 O -0.36 -0.45 10.23 -40.90 -0.42 -0.86 16 13 C 0.53 1.45 7.94 34.23 0.27 1.72 16 14 O -0.49 -2.51 16.63 -19.32 -0.32 -2.83 16 15 C 0.03 0.06 6.99 -82.32 -0.58 -0.52 16 16 C -0.09 -0.15 10.53 -39.14 -0.41 -0.56 16 17 C -0.12 -0.17 6.16 -106.93 -0.66 -0.83 16 18 C -0.05 0.01 10.06 -39.53 -0.40 -0.39 16 19 C -0.15 0.10 8.59 -39.98 -0.34 -0.24 16 20 C -0.08 0.02 5.40 -104.57 -0.56 -0.55 16 21 C -0.08 0.06 2.81 36.00 0.10 0.16 16 22 O -0.53 -0.38 12.76 -35.23 -0.45 -0.83 16 23 Si 0.69 -0.96 29.75 -169.99 -5.06 -6.02 16 24 C -0.10 -0.04 9.61 -39.42 -0.38 -0.42 16 25 C 0.12 0.14 7.25 -83.97 -0.61 -0.47 16 26 N -0.57 -0.23 6.19 -7.37 -0.05 -0.27 16 27 C -0.15 0.11 7.47 -25.91 -0.19 -0.09 16 28 H 0.06 -0.01 8.14 -51.92 -0.42 -0.43 16 29 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 30 H 0.06 -0.06 7.02 -51.93 -0.36 -0.42 16 31 H 0.06 0.00 8.14 -51.93 -0.42 -0.43 16 32 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 33 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 34 H 0.06 -0.08 6.24 -51.93 -0.32 -0.40 16 35 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 36 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 37 H 0.10 -0.05 8.10 -51.93 -0.42 -0.47 16 38 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 39 H 0.08 0.04 7.84 -51.93 -0.41 -0.36 16 40 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 41 H 0.16 0.07 8.06 -52.49 -0.42 -0.36 16 42 H 0.13 -0.30 8.06 -52.49 -0.42 -0.72 16 43 H 0.13 -0.33 4.82 -52.49 -0.25 -0.59 16 44 H 0.12 -0.18 7.96 -51.93 -0.41 -0.60 16 45 H 0.38 -0.74 8.70 45.56 0.40 -0.34 16 46 H -0.26 -0.15 7.11 56.52 0.40 0.25 16 47 H -0.26 -0.52 7.11 56.52 0.40 -0.12 16 48 H 0.13 -0.06 8.06 -52.48 -0.42 -0.48 16 49 H 0.43 -0.73 8.96 -40.82 -0.37 -1.09 16 50 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 51 H 0.09 0.02 7.90 -51.93 -0.41 -0.39 16 LS Contribution 415.74 15.07 6.27 6.27 Total: 0.00 -6.82 415.74 -11.69 -18.51 By element: Atomic # 1 Polarization: -3.98 SS G_CDS: -7.97 Total: -11.95 kcal Atomic # 6 Polarization: 2.20 SS G_CDS: -3.34 Total: -1.14 kcal Atomic # 7 Polarization: -0.23 SS G_CDS: -0.05 Total: -0.27 kcal Atomic # 8 Polarization: -3.86 SS G_CDS: -1.54 Total: -5.40 kcal Atomic # 14 Polarization: -0.96 SS G_CDS: -5.06 Total: -6.02 kcal Total LS contribution 6.27 Total: 6.27 kcal Total: -6.82 -11.69 -18.51 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_13158384_14598394.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.474 kcal (2) G-P(sol) polarization free energy of solvation -6.820 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -69.294 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.686 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.507 kcal (6) G-S(sol) free energy of system = (1) + (5) -80.981 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds