Wall clock time and date at job start Sat Mar 6 2021 02:39:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.36498 * 125.81001 * 2 1 4 4 C 1.47230 * 127.19952 * 359.96428 * 3 2 1 5 5 O 1.21534 * 120.00362 * 359.97438 * 4 3 2 6 6 O 1.34773 * 119.99945 * 179.97438 * 4 3 2 7 7 C 1.45200 * 116.99957 * 180.02562 * 6 4 3 8 8 C 1.53003 * 109.46987 * 179.97438 * 7 6 4 9 9 H 1.09002 * 112.85017 * 45.32828 * 8 7 6 10 10 C 1.53786 * 113.61503 * 176.52446 * 8 7 6 11 11 C 1.53783 * 87.08050 * 140.06140 * 10 8 7 12 12 H 1.08998 * 113.60991 * 89.11784 * 11 10 8 13 13 O 1.42897 * 113.61314 * 219.93342 * 11 10 8 14 14 C 1.53781 * 113.61337 * 274.13240 * 8 7 6 15 15 C 1.47058 * 105.59809 * 180.22029 * 3 2 1 16 16 C 1.34162 * 105.94869 * 359.60611 * 15 3 2 17 17 C 1.50700 * 125.42468 * 180.09151 * 16 15 3 18 18 O 1.42897 * 109.47432 * 300.33548 * 17 16 15 19 19 Si 1.86302 * 109.46892 * 180.33245 * 17 16 15 20 20 O 1.33631 * 125.80819 * 179.97438 * 2 1 3 21 21 H 1.09003 * 109.47132 * 89.99391 * 1 2 3 22 22 H 1.08997 * 109.47299 * 209.99229 * 1 2 3 23 23 H 1.09000 * 109.46941 * 329.99585 * 1 2 3 24 24 H 1.08997 * 109.47556 * 59.99953 * 7 6 4 25 25 H 1.09004 * 109.46908 * 299.99235 * 7 6 4 26 26 H 1.08992 * 113.61675 * 254.61398 * 10 8 7 27 27 H 1.09000 * 113.60973 * 25.51686 * 10 8 7 28 28 H 0.96705 * 113.99407 * 180.02562 * 13 11 10 29 29 H 1.08999 * 113.61567 * 334.48261 * 14 8 7 30 30 H 1.08998 * 113.61196 * 105.38615 * 14 8 7 31 31 H 1.08004 * 127.02769 * 179.76929 * 15 3 2 32 32 H 1.09003 * 109.47087 * 60.33588 * 17 16 15 33 33 H 0.96697 * 113.99800 * 180.02562 * 18 17 16 34 34 H 1.48505 * 109.99916 * 60.00242 * 19 17 16 35 35 H 1.48494 * 110.00259 * 181.32006 * 19 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3056 1.1069 0.0000 4 6 1.8754 2.5150 -0.0007 5 8 0.6913 2.7886 -0.0019 6 8 2.7947 3.5005 -0.0001 7 6 2.2983 4.8650 -0.0003 8 6 3.4796 5.8374 0.0011 9 1 4.2560 5.5614 -0.7125 10 6 3.0614 7.3149 -0.0844 11 6 4.1760 7.6077 0.9339 12 1 5.1427 7.8156 0.4753 13 8 3.8103 8.5747 1.9204 14 6 4.0183 6.1502 1.4071 15 6 3.6856 0.5989 -0.0054 16 6 3.5859 -0.7390 0.0007 17 6 4.7456 -1.7014 0.0004 18 8 5.5422 -1.4870 -1.1665 19 14 4.1018 -3.4496 0.0002 20 8 2.2888 -1.0837 0.0005 21 1 -0.3633 0.0001 -1.0277 22 1 -0.3634 -0.8900 0.5137 23 1 -0.3633 0.8900 0.5139 24 1 1.6907 5.0308 0.8893 25 1 1.6919 5.0309 -0.8908 26 1 3.2356 7.7620 -1.0630 27 1 2.0591 7.5077 0.2979 28 1 4.5075 8.7633 2.5635 29 1 3.2771 6.0253 2.1965 30 1 4.9644 5.6577 1.6317 31 1 4.5939 1.1833 -0.0104 32 1 5.3535 -1.5381 0.8903 33 1 6.3081 -2.0735 -1.2329 34 1 3.2713 -3.6849 -1.2082 35 1 5.2353 -4.4083 0.0320 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_13308380_11354868.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 02:39:11 Heat of formation + Delta-G solvation = -120.534833 kcal Electronic energy + Delta-G solvation = -20299.043049 eV Core-core repulsion = 16845.842168 eV Total energy + Delta-G solvation = -3453.200881 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 269.107 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -43.77553 -41.23877 -40.16732 -38.16251 -37.41291 -35.96876 -34.20893 -33.28132 -30.04568 -29.26497 -26.81017 -26.06355 -24.58891 -23.34239 -22.38930 -20.86263 -20.28566 -18.95582 -18.61806 -18.59049 -17.69471 -17.53337 -17.04661 -16.77263 -16.41162 -15.96505 -15.75114 -15.23801 -14.97897 -14.28279 -14.23938 -14.06344 -13.94703 -13.91191 -13.57875 -13.51107 -13.19794 -12.79518 -12.65292 -12.41726 -12.13666 -12.11076 -11.65381 -11.45471 -11.23184 -10.93916 -10.78601 -10.70944 -9.60340 -5.03625 0.12369 0.77797 1.09802 1.27335 1.59749 1.72606 1.90524 2.08816 3.11530 3.17696 3.39092 3.40399 3.48405 3.64526 3.68107 3.85545 3.91747 4.08852 4.14967 4.17566 4.22064 4.42640 4.46847 4.49557 4.58010 4.64229 4.71625 4.72113 4.77475 4.91795 5.05270 5.06585 5.21344 5.29938 5.49392 5.91576 6.22699 6.66289 6.84442 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 C 0.108 3.892 3 C -0.240 4.240 4 C 0.544 3.456 5 O -0.510 6.510 6 O -0.347 6.347 7 C 0.081 3.919 8 C -0.111 4.111 9 H 0.106 0.894 10 C -0.120 4.120 11 C 0.076 3.924 12 H 0.085 0.915 13 O -0.560 6.560 14 C -0.164 4.164 15 C -0.123 4.123 16 C -0.016 4.016 17 C -0.036 4.036 18 O -0.533 6.533 19 Si 0.699 3.301 20 O -0.163 6.163 21 H 0.095 0.905 22 H 0.087 0.913 23 H 0.111 0.889 24 H 0.075 0.925 25 H 0.075 0.925 26 H 0.081 0.919 27 H 0.095 0.905 28 H 0.380 0.620 29 H 0.091 0.909 30 H 0.074 0.926 31 H 0.164 0.836 32 H 0.098 0.902 33 H 0.389 0.611 34 H -0.251 1.251 35 H -0.251 1.251 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.848 -1.888 2.439 4.198 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C 0.055 3.945 3 C -0.243 4.243 4 C 0.390 3.610 5 O -0.400 6.400 6 O -0.264 6.264 7 C 0.007 3.993 8 C -0.129 4.129 9 H 0.124 0.876 10 C -0.157 4.157 11 C 0.017 3.983 12 H 0.103 0.897 13 O -0.365 6.365 14 C -0.201 4.201 15 C -0.143 4.143 16 C -0.063 4.063 17 C -0.145 4.145 18 O -0.342 6.342 19 Si 0.598 3.402 20 O -0.060 6.060 21 H 0.114 0.886 22 H 0.106 0.894 23 H 0.129 0.871 24 H 0.093 0.907 25 H 0.093 0.907 26 H 0.100 0.900 27 H 0.113 0.887 28 H 0.228 0.772 29 H 0.110 0.890 30 H 0.093 0.907 31 H 0.182 0.818 32 H 0.116 0.884 33 H 0.238 0.762 34 H -0.175 1.175 35 H -0.176 1.176 Dipole moment (debyes) X Y Z Total from point charges 1.402 -2.383 1.568 3.178 hybrid contribution 1.690 0.443 -0.367 1.785 sum 3.092 -1.939 1.201 3.843 Atomic orbital electron populations 1.20767 0.82972 1.05769 1.05064 1.22906 0.94037 0.82609 0.94954 1.20175 0.94050 0.90616 1.19418 1.19830 0.83637 0.85100 0.72458 1.90842 1.17888 1.84403 1.46867 1.86547 1.39381 1.16366 1.84112 1.23090 0.96325 0.76833 1.03035 1.22369 0.97955 0.93444 0.99181 0.87565 1.23064 1.00060 0.93283 0.99310 1.23341 0.97878 0.87057 0.90012 0.89718 1.86529 1.44377 1.61895 1.43733 1.23827 1.02469 0.97011 0.96833 1.22601 0.96579 0.92975 1.02104 1.20995 0.81952 0.94153 1.09237 1.23784 0.90877 1.08701 0.91144 1.86558 1.42545 1.62369 1.42717 0.94464 0.83559 0.72884 0.89320 1.83662 1.16333 1.34612 1.71364 0.88613 0.89374 0.87099 0.90672 0.90675 0.90034 0.88679 0.77206 0.89034 0.90698 0.81817 0.88403 0.76157 1.17515 1.17571 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.04 9.89 36.00 0.36 0.39 16 2 C 0.11 0.23 7.38 -34.94 -0.26 -0.03 16 3 C -0.24 -0.79 6.32 -103.30 -0.65 -1.44 16 4 C 0.54 2.25 7.95 34.38 0.27 2.52 16 5 O -0.51 -2.80 14.64 -19.29 -0.28 -3.08 16 6 O -0.35 -1.09 10.13 -40.69 -0.41 -1.50 16 7 C 0.08 0.11 5.30 37.16 0.20 0.30 16 8 C -0.11 0.04 4.01 -89.80 -0.36 -0.32 16 9 H 0.11 -0.08 8.14 -51.93 -0.42 -0.51 16 10 C -0.12 0.05 7.47 -25.92 -0.19 -0.15 16 11 C 0.08 -0.04 5.22 -25.77 -0.13 -0.17 16 12 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 13 O -0.56 -0.46 13.68 -35.23 -0.48 -0.94 16 14 C -0.16 0.07 7.49 -25.78 -0.19 -0.12 16 15 C -0.12 -0.30 10.91 -37.44 -0.41 -0.71 16 16 C -0.02 -0.03 6.24 -35.74 -0.22 -0.25 16 17 C -0.04 0.03 2.97 36.01 0.11 0.13 16 18 O -0.53 -0.11 12.84 -35.23 -0.45 -0.56 16 19 Si 0.70 -0.84 32.08 -169.99 -5.45 -6.29 16 20 O -0.16 -0.33 8.88 7.71 0.07 -0.26 16 21 H 0.10 -0.10 8.14 -51.93 -0.42 -0.53 16 22 H 0.09 -0.21 8.14 -51.93 -0.42 -0.64 16 23 H 0.11 0.05 6.49 -51.93 -0.34 -0.29 16 24 H 0.07 0.11 7.87 -51.93 -0.41 -0.30 16 25 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 26 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 27 H 0.09 0.03 8.10 -51.93 -0.42 -0.39 16 28 H 0.38 -1.24 9.12 45.56 0.42 -0.82 16 29 H 0.09 0.03 7.92 -51.93 -0.41 -0.38 16 30 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 31 H 0.16 0.20 8.06 -52.48 -0.42 -0.22 16 32 H 0.10 -0.32 7.96 -51.93 -0.41 -0.73 16 33 H 0.39 -1.67 8.74 45.56 0.40 -1.27 16 34 H -0.25 -0.68 7.11 56.52 0.40 -0.28 16 35 H -0.25 0.02 7.11 56.52 0.40 0.42 16 LS Contribution 308.84 15.07 4.65 4.65 Total: 0.00 -8.07 308.84 -7.61 -15.68 By element: Atomic # 1 Polarization: -4.09 SS G_CDS: -3.76 Total: -7.85 kcal Atomic # 6 Polarization: 1.64 SS G_CDS: -1.49 Total: 0.16 kcal Atomic # 8 Polarization: -4.78 SS G_CDS: -1.56 Total: -6.34 kcal Atomic # 14 Polarization: -0.84 SS G_CDS: -5.45 Total: -6.29 kcal Total LS contribution 4.65 Total: 4.65 kcal Total: -8.07 -7.61 -15.68 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_13308380_11354868.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -104.857 kcal (2) G-P(sol) polarization free energy of solvation -8.071 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -112.929 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.606 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.678 kcal (6) G-S(sol) free energy of system = (1) + (5) -120.535 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds