Wall clock time and date at job start Sat Mar 6 2021 05:48:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.36503 * 125.80583 * 2 1 4 4 C 1.47227 * 127.20043 * 359.97056 * 3 2 1 5 5 O 1.21536 * 120.00429 * 0.02562 * 4 3 2 6 6 O 1.34783 * 119.99860 * 180.02562 * 4 3 2 7 7 C 1.45194 * 116.99724 * 180.02562 * 6 4 3 8 8 C 1.53000 * 109.46676 * 180.02562 * 7 6 4 9 9 H 1.09003 * 112.85101 * 43.80444 * 8 7 6 10 10 C 1.53785 * 113.61461 * 174.99891 * 8 7 6 11 11 C 1.53781 * 87.08169 * 139.97770 * 10 8 7 12 12 H 1.08999 * 113.61559 * 220.01529 * 11 10 8 13 13 N 1.46504 * 113.61225 * 89.20286 * 11 10 8 14 14 C 1.34771 * 120.00010 * 155.00225 * 13 11 10 15 15 O 1.21508 * 120.00279 * 359.97438 * 14 13 11 16 16 O 1.34637 * 119.99812 * 179.97438 * 14 13 11 17 17 C 1.45207 * 117.00094 * 179.97438 * 16 14 13 18 18 C 1.53001 * 109.47026 * 59.99860 * 17 16 14 19 19 C 1.52993 * 109.47304 * 180.02562 * 17 16 14 20 20 C 1.53004 * 109.46853 * 300.00034 * 17 16 14 21 21 C 1.53775 * 87.08262 * 334.56895 * 11 10 8 22 22 C 1.47062 * 105.59768 * 179.97438 * 3 2 1 23 23 C 1.34158 * 105.94412 * 359.97438 * 22 3 2 24 24 C 1.50707 * 125.42528 * 179.97438 * 23 22 3 25 25 O 1.42903 * 109.46442 * 65.00411 * 24 23 22 26 26 Si 1.86293 * 109.47256 * 184.99978 * 24 23 22 27 27 O 1.33616 * 125.80871 * 180.25594 * 2 1 3 28 28 H 1.08995 * 109.47161 * 90.00253 * 1 2 3 29 29 H 1.08998 * 109.47348 * 210.00639 * 1 2 3 30 30 H 1.09005 * 109.47274 * 330.00426 * 1 2 3 31 31 H 1.08999 * 109.47081 * 299.99936 * 7 6 4 32 32 H 1.08996 * 109.47486 * 60.00232 * 7 6 4 33 33 H 1.09000 * 113.61320 * 254.52825 * 10 8 7 34 34 H 1.09001 * 113.61392 * 25.43073 * 10 8 7 35 35 H 0.97001 * 120.00040 * 334.99921 * 13 11 10 36 36 H 1.08996 * 109.46882 * 60.00315 * 18 17 16 37 37 H 1.08993 * 109.46858 * 180.02562 * 18 17 16 38 38 H 1.08999 * 109.46899 * 300.00586 * 18 17 16 39 39 H 1.08996 * 109.47884 * 59.99752 * 19 17 16 40 40 H 1.08998 * 109.47239 * 180.02562 * 19 17 16 41 41 H 1.09006 * 109.46856 * 299.99886 * 19 17 16 42 42 H 1.09004 * 109.47011 * 60.00182 * 20 17 16 43 43 H 1.09002 * 109.47205 * 179.97438 * 20 17 16 44 44 H 1.08999 * 109.47613 * 300.00102 * 20 17 16 45 45 H 1.09002 * 113.61613 * 270.88050 * 21 11 10 46 46 H 1.09002 * 113.61955 * 139.97923 * 21 11 10 47 47 H 1.07997 * 127.02486 * 179.97438 * 22 3 2 48 48 H 1.08999 * 109.47345 * 305.00481 * 24 23 22 49 49 H 0.96700 * 114.00311 * 60.00230 * 25 24 23 50 50 H 1.48501 * 109.99918 * 58.68485 * 26 24 23 51 51 H 1.48506 * 109.99973 * 180.02562 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3056 1.1070 0.0000 4 6 1.8753 2.5150 -0.0006 5 8 0.6912 2.7886 -0.0007 6 8 2.7947 3.5007 -0.0010 7 6 2.2982 4.8651 -0.0010 8 6 3.4794 5.8375 -0.0022 9 1 4.2665 5.5466 -0.6980 10 6 3.0628 7.3127 -0.1251 11 6 4.1603 7.6269 0.9052 12 1 3.8686 8.3788 1.6384 13 7 5.4693 7.8960 0.3046 14 6 6.3708 8.6504 0.9637 15 8 6.0979 9.1078 2.0558 16 8 7.5739 8.8972 0.4120 17 6 8.4947 9.7178 1.1783 18 6 8.7881 9.0399 2.5182 19 6 9.7984 9.8879 0.3959 20 6 7.8675 11.0908 1.4279 21 6 3.9951 6.1821 1.4050 22 6 3.6857 0.5991 0.0006 23 6 3.5860 -0.7388 0.0015 24 6 4.7457 -1.7013 0.0019 25 8 5.4760 -1.5665 1.2228 26 14 4.1061 -3.4444 -0.1499 27 8 2.2888 -1.0836 -0.0048 28 1 -0.3633 0.0000 -1.0276 29 1 -0.3634 -0.8899 0.5139 30 1 -0.3634 0.8901 0.5138 31 1 1.6908 5.0307 -0.8908 32 1 1.6914 5.0310 0.8891 33 1 3.2532 7.7396 -1.1099 34 1 2.0542 7.5132 0.2364 35 1 5.6871 7.5311 -0.5674 36 1 9.2350 8.0618 2.3402 37 1 9.4789 9.6561 3.0935 38 1 7.8591 8.9190 3.0753 39 1 9.5892 10.3711 -0.5585 40 1 10.4898 10.5036 0.9713 41 1 10.2455 8.9099 0.2177 42 1 6.9385 10.9700 1.9852 43 1 8.5584 11.7068 2.0035 44 1 7.6583 11.5738 0.4734 45 1 3.2414 6.0734 2.1850 46 1 4.9380 5.6961 1.6556 47 1 4.5938 1.1836 0.0004 48 1 5.4016 -1.4802 -0.8402 49 1 4.9536 -1.7489 2.0158 50 1 3.3178 -3.5891 -1.4001 51 1 5.2401 -4.4033 -0.1501 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_13308380_15734084.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 05:48:53 Heat of formation + Delta-G solvation = -155.587847 kcal Electronic energy + Delta-G solvation = -33203.384810 eV Core-core repulsion = 28458.641577 eV Total energy + Delta-G solvation = -4744.743232 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.181 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -43.83949 -41.88153 -41.23579 -40.29537 -38.11784 -37.90038 -37.25178 -35.24828 -34.30878 -34.01541 -33.23667 -30.07768 -29.29911 -28.31415 -28.27172 -26.90231 -26.19844 -24.93456 -24.14811 -23.11988 -22.51312 -21.07941 -20.78598 -20.22326 -19.22260 -19.02027 -18.35802 -17.90634 -17.58261 -17.36946 -17.29106 -17.04218 -16.76309 -16.58148 -15.95681 -15.86970 -15.63178 -15.36810 -15.20023 -15.06162 -14.56584 -14.39041 -14.30481 -14.22918 -14.05734 -13.97092 -13.74342 -13.58548 -13.41386 -13.30662 -13.04613 -13.01270 -12.87065 -12.83726 -12.81178 -12.43722 -12.25145 -12.19994 -12.12608 -11.87029 -11.83403 -11.45881 -11.28837 -11.25012 -10.96862 -10.95654 -10.68781 -10.17685 -9.69114 -5.10035 0.06500 0.75615 1.07638 1.16652 1.28871 1.62622 1.73623 1.86981 1.88438 2.02415 3.10161 3.11429 3.26234 3.30030 3.34483 3.56071 3.65876 3.66306 3.79199 3.84849 3.88641 3.98657 4.05825 4.11369 4.19110 4.28352 4.33563 4.41565 4.43573 4.48583 4.56030 4.57004 4.57186 4.58370 4.64560 4.68329 4.77291 4.79621 4.87733 4.90591 4.93128 4.94792 4.98850 5.02019 5.10565 5.15334 5.35014 5.38247 5.43180 5.50306 5.62173 5.83629 6.33221 6.41366 6.78590 7.43470 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 C 0.107 3.893 3 C -0.241 4.241 4 C 0.543 3.457 5 O -0.510 6.510 6 O -0.347 6.347 7 C 0.078 3.922 8 C -0.113 4.113 9 H 0.104 0.896 10 C -0.135 4.135 11 C 0.138 3.862 12 H 0.112 0.888 13 N -0.695 5.695 14 C 0.653 3.347 15 O -0.564 6.564 16 O -0.365 6.365 17 C 0.137 3.863 18 C -0.184 4.184 19 C -0.142 4.142 20 C -0.184 4.184 21 C -0.146 4.146 22 C -0.126 4.126 23 C -0.063 4.063 24 C -0.027 4.027 25 O -0.530 6.530 26 Si 0.704 3.296 27 O -0.163 6.163 28 H 0.095 0.905 29 H 0.087 0.913 30 H 0.110 0.890 31 H 0.074 0.926 32 H 0.076 0.924 33 H 0.083 0.917 34 H 0.104 0.896 35 H 0.407 0.593 36 H 0.060 0.940 37 H 0.072 0.928 38 H 0.087 0.913 39 H 0.067 0.933 40 H 0.082 0.918 41 H 0.067 0.933 42 H 0.087 0.913 43 H 0.072 0.928 44 H 0.060 0.940 45 H 0.097 0.903 46 H 0.078 0.922 47 H 0.164 0.836 48 H 0.134 0.866 49 H 0.384 0.616 50 H -0.253 1.253 51 H -0.246 1.246 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.548 -1.620 -0.415 1.760 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C 0.054 3.946 3 C -0.243 4.243 4 C 0.389 3.611 5 O -0.400 6.400 6 O -0.264 6.264 7 C 0.005 3.995 8 C -0.131 4.131 9 H 0.122 0.878 10 C -0.173 4.173 11 C 0.033 3.967 12 H 0.130 0.870 13 N -0.354 5.354 14 C 0.407 3.593 15 O -0.453 6.453 16 O -0.280 6.280 17 C 0.100 3.900 18 C -0.241 4.241 19 C -0.199 4.199 20 C -0.241 4.241 21 C -0.185 4.185 22 C -0.145 4.145 23 C -0.111 4.111 24 C -0.137 4.137 25 O -0.335 6.335 26 Si 0.603 3.397 27 O -0.060 6.060 28 H 0.113 0.887 29 H 0.106 0.894 30 H 0.129 0.871 31 H 0.093 0.907 32 H 0.094 0.906 33 H 0.102 0.898 34 H 0.123 0.877 35 H 0.242 0.758 36 H 0.079 0.921 37 H 0.091 0.909 38 H 0.106 0.894 39 H 0.086 0.914 40 H 0.101 0.899 41 H 0.086 0.914 42 H 0.106 0.894 43 H 0.091 0.909 44 H 0.079 0.921 45 H 0.115 0.885 46 H 0.097 0.903 47 H 0.182 0.818 48 H 0.151 0.849 49 H 0.232 0.768 50 H -0.177 1.177 51 H -0.170 1.170 Dipole moment (debyes) X Y Z Total from point charges -0.524 -2.098 -0.746 2.287 hybrid contribution 0.354 0.732 -0.697 1.071 sum -0.169 -1.366 -1.443 1.994 Atomic orbital electron populations 1.20766 0.83054 1.05774 1.05039 1.22930 0.94095 0.82753 0.94867 1.20199 0.94067 0.90644 1.19421 1.19841 0.83642 0.85129 0.72455 1.90844 1.17889 1.84410 1.46870 1.86562 1.39333 1.16376 1.84099 1.23142 0.96462 0.76922 1.03013 1.22714 0.97763 0.93379 0.99276 0.87808 1.23372 0.99500 0.93971 1.00453 1.21747 0.80712 0.97956 0.96262 0.87031 1.44354 1.14088 1.53983 1.22942 1.18055 0.80301 0.78254 0.82720 1.90919 1.79170 1.54747 1.20434 1.86307 1.24071 1.67524 1.50053 1.22126 0.87273 0.89457 0.91107 1.22522 1.04272 1.00905 0.96442 1.21879 0.94058 1.03174 1.00804 1.22526 1.03570 0.95102 1.02938 1.23575 1.02718 0.95827 0.96385 1.22662 0.96619 0.93082 1.02117 1.22689 0.82751 0.95722 1.09889 1.24445 0.90544 1.07593 0.91140 1.86571 1.38898 1.93160 1.14911 0.94213 0.82737 0.74448 0.88272 1.83692 1.16542 1.34545 1.71235 0.88655 0.89397 0.87112 0.90735 0.90585 0.89833 0.87728 0.75814 0.92105 0.90914 0.89402 0.91392 0.89908 0.91394 0.89421 0.90910 0.92112 0.88482 0.90345 0.81795 0.84874 0.76769 1.17720 1.16996 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.11 9.89 36.01 0.36 0.47 16 2 C 0.11 0.11 7.38 -34.93 -0.26 -0.15 16 3 C -0.24 -0.54 6.32 -103.29 -0.65 -1.19 16 4 C 0.54 1.68 7.95 34.38 0.27 1.96 16 5 O -0.51 -2.28 14.64 -19.29 -0.28 -2.56 16 6 O -0.35 -0.70 10.13 -40.72 -0.41 -1.12 16 7 C 0.08 -0.02 5.31 37.16 0.20 0.18 16 8 C -0.11 0.21 3.90 -89.80 -0.35 -0.14 16 9 H 0.10 -0.20 8.14 -51.93 -0.42 -0.63 16 10 C -0.13 0.39 7.39 -25.92 -0.19 0.19 16 11 C 0.14 -0.13 4.32 -67.12 -0.29 -0.42 16 12 H 0.11 0.04 7.46 -51.93 -0.39 -0.35 16 13 N -0.70 0.02 5.27 -57.93 -0.31 -0.28 16 14 C 0.65 1.89 8.06 54.05 0.44 2.32 16 15 O -0.56 -2.93 11.48 -19.28 -0.22 -3.15 16 16 O -0.36 -0.94 9.94 -40.32 -0.40 -1.34 16 17 C 0.14 0.20 1.13 -90.62 -0.10 0.10 16 18 C -0.18 -0.28 8.37 37.16 0.31 0.03 16 19 C -0.14 0.08 8.85 37.15 0.33 0.41 16 20 C -0.18 -0.26 8.37 37.16 0.31 0.05 16 21 C -0.15 0.16 7.43 -25.92 -0.19 -0.03 16 22 C -0.13 -0.16 10.93 -37.44 -0.41 -0.57 16 23 C -0.06 -0.03 6.18 -35.74 -0.22 -0.25 16 24 C -0.03 0.03 2.97 36.01 0.11 0.13 16 25 O -0.53 0.44 12.88 -35.23 -0.45 -0.01 16 26 Si 0.70 -1.05 32.09 -169.99 -5.46 -6.51 16 27 O -0.16 -0.11 8.89 7.72 0.07 -0.04 16 28 H 0.10 -0.18 8.14 -51.93 -0.42 -0.61 16 29 H 0.09 -0.27 8.14 -51.93 -0.42 -0.70 16 30 H 0.11 -0.03 6.49 -51.93 -0.34 -0.36 16 31 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 32 H 0.08 -0.03 7.84 -51.93 -0.41 -0.44 16 33 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 34 H 0.10 -0.38 8.10 -51.93 -0.42 -0.80 16 35 H 0.41 -0.78 8.81 -40.82 -0.36 -1.14 16 36 H 0.06 0.08 8.14 -51.93 -0.42 -0.34 16 37 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 38 H 0.09 0.32 5.88 -51.93 -0.31 0.01 16 39 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 40 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 41 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 42 H 0.09 0.31 5.88 -51.93 -0.31 0.00 16 43 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 44 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 45 H 0.10 -0.15 7.90 -51.93 -0.41 -0.56 16 46 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 47 H 0.16 0.08 8.06 -52.49 -0.42 -0.34 16 48 H 0.13 -0.19 7.96 -51.93 -0.41 -0.61 16 49 H 0.38 -1.76 8.70 45.56 0.40 -1.36 16 50 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 51 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 LS Contribution 423.22 15.07 6.38 6.38 Total: 0.00 -8.33 423.22 -9.50 -17.82 By element: Atomic # 1 Polarization: -4.22 SS G_CDS: -8.07 Total: -12.29 kcal Atomic # 6 Polarization: 3.44 SS G_CDS: -0.35 Total: 3.09 kcal Atomic # 7 Polarization: 0.02 SS G_CDS: -0.31 Total: -0.28 kcal Atomic # 8 Polarization: -6.51 SS G_CDS: -1.70 Total: -8.22 kcal Atomic # 14 Polarization: -1.05 SS G_CDS: -5.46 Total: -6.51 kcal Total LS contribution 6.38 Total: 6.38 kcal Total: -8.33 -9.50 -17.82 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_13308380_15734084.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -137.763 kcal (2) G-P(sol) polarization free energy of solvation -8.327 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -146.091 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.497 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.824 kcal (6) G-S(sol) free energy of system = (1) + (5) -155.588 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds