Wall clock time and date at job start Sat Mar 6 2021 05:49:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50692 * 1 3 3 C 1.36496 * 125.81393 * 2 1 4 4 C 1.47229 * 127.19886 * 359.95746 * 3 2 1 5 5 O 1.21535 * 119.99961 * 359.97438 * 4 3 2 6 6 O 1.34775 * 120.00010 * 180.02562 * 4 3 2 7 7 C 1.45200 * 117.00151 * 179.97438 * 6 4 3 8 8 C 1.52990 * 109.47114 * 179.97438 * 7 6 4 9 9 H 1.09000 * 112.90908 * 43.75454 * 8 7 6 10 10 C 1.53786 * 113.61464 * 175.00082 * 8 7 6 11 11 C 1.53781 * 87.17350 * 140.02626 * 10 8 7 12 12 H 1.08999 * 113.61567 * 89.07405 * 11 10 8 13 13 N 1.46500 * 113.61760 * 219.89426 * 11 10 8 14 14 C 1.34768 * 120.00289 * 205.00346 * 13 11 10 15 15 O 1.21507 * 120.00309 * 359.97438 * 14 13 11 16 16 O 1.34640 * 119.99863 * 179.97438 * 14 13 11 17 17 C 1.45205 * 116.99925 * 179.97438 * 16 14 13 18 18 C 1.53000 * 109.46584 * 60.00094 * 17 16 14 19 19 C 1.52994 * 109.47219 * 179.97438 * 17 16 14 20 20 C 1.52999 * 109.47307 * 300.00426 * 17 16 14 21 21 C 1.53781 * 87.08070 * 334.52830 * 11 10 8 22 22 C 1.47058 * 105.60023 * 180.21828 * 3 2 1 23 23 C 1.34167 * 105.94720 * 359.60312 * 22 3 2 24 24 C 1.50697 * 125.42616 * 180.09489 * 23 22 3 25 25 O 1.42903 * 109.47101 * 300.32976 * 24 23 22 26 26 Si 1.86302 * 109.46966 * 180.33173 * 24 23 22 27 27 O 1.33639 * 125.80386 * 179.97438 * 2 1 3 28 28 H 1.09008 * 109.47232 * 89.99785 * 1 2 3 29 29 H 1.08992 * 109.47903 * 210.00348 * 1 2 3 30 30 H 1.09007 * 109.47215 * 330.00656 * 1 2 3 31 31 H 1.09007 * 109.46549 * 60.00016 * 7 6 4 32 32 H 1.08994 * 109.47109 * 300.00291 * 7 6 4 33 33 H 1.09002 * 113.61357 * 25.43543 * 10 8 7 34 34 H 1.09002 * 113.61608 * 254.61705 * 10 8 7 35 35 H 0.97000 * 119.99380 * 24.99478 * 13 11 10 36 36 H 1.08999 * 109.47480 * 60.00451 * 18 17 16 37 37 H 1.09005 * 109.47119 * 179.97438 * 18 17 16 38 38 H 1.09003 * 109.47665 * 299.99724 * 18 17 16 39 39 H 1.08999 * 109.47120 * 60.00287 * 19 17 16 40 40 H 1.08999 * 109.47047 * 179.97438 * 19 17 16 41 41 H 1.08997 * 109.47066 * 300.00300 * 19 17 16 42 42 H 1.08996 * 109.47102 * 59.99718 * 20 17 16 43 43 H 1.08997 * 109.46969 * 179.97438 * 20 17 16 44 44 H 1.08999 * 109.46822 * 299.99584 * 20 17 16 45 45 H 1.09005 * 113.61471 * 139.98321 * 21 11 10 46 46 H 1.08996 * 113.61178 * 270.79663 * 21 11 10 47 47 H 1.07997 * 127.03045 * 179.75985 * 22 3 2 48 48 H 1.08998 * 109.47478 * 60.33179 * 24 23 22 49 49 H 0.96702 * 113.99663 * 179.97438 * 25 24 23 50 50 H 1.48498 * 109.99917 * 298.67890 * 26 24 23 51 51 H 1.48494 * 109.99966 * 60.00179 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.3056 1.1069 0.0000 4 6 1.8755 2.5149 -0.0009 5 8 0.6914 2.7886 -0.0022 6 8 2.7949 3.5004 -0.0013 7 6 2.2986 4.8650 -0.0027 8 6 3.4798 5.8372 -0.0023 9 1 4.2690 5.5464 -0.6957 10 6 3.0635 7.3124 -0.1265 11 6 4.1597 7.6295 0.9044 12 1 5.1343 7.8278 0.4584 13 7 3.7665 8.6433 1.8861 14 6 4.7080 9.3817 2.5063 15 8 5.8831 9.2063 2.2516 16 8 4.3465 10.3138 3.4082 17 6 5.4138 11.0712 4.0373 18 6 6.2066 11.8218 2.9655 19 6 4.8138 12.0750 5.0238 20 6 6.3454 10.1151 4.7849 21 6 3.9946 6.1857 1.4072 22 6 3.6856 0.5988 -0.0054 23 6 3.5859 -0.7392 0.0009 24 6 4.7455 -1.7016 0.0007 25 8 5.5420 -1.4874 -1.1663 26 14 4.1015 -3.4498 0.0006 27 8 2.2887 -1.0838 0.0005 28 1 -0.3634 0.0000 -1.0277 29 1 -0.3634 -0.8898 0.5138 30 1 -0.3634 0.8901 0.5138 31 1 1.6911 5.0315 0.8869 32 1 1.6920 5.0300 -0.8931 33 1 2.0544 7.5131 0.2334 34 1 3.2542 7.7385 -1.1116 35 1 2.8285 8.7832 2.0896 36 1 5.5430 12.5029 2.4329 37 1 7.0076 12.3907 3.4377 38 1 6.6341 11.1070 2.2623 39 1 4.2486 11.5406 5.7874 40 1 5.6150 12.6432 5.4964 41 1 4.1504 12.7560 4.4907 42 1 6.7728 9.4003 4.0818 43 1 7.1468 10.6837 5.2568 44 1 5.7805 9.5804 5.5485 45 1 4.9376 5.7008 1.6601 46 1 3.2411 6.0786 2.1875 47 1 4.5939 1.1831 -0.0105 48 1 5.3533 -1.5384 0.8905 49 1 6.3084 -2.0735 -1.2323 50 1 3.2977 -3.6950 1.2250 51 1 3.2711 -3.6851 -1.2077 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_13308380_15734238.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 05:49:02 Heat of formation + Delta-G solvation = -155.748157 kcal Electronic energy + Delta-G solvation = -32965.230206 eV Core-core repulsion = 28220.480023 eV Total energy + Delta-G solvation = -4744.750184 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.181 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -43.83951 -41.81325 -41.23413 -40.21812 -38.03983 -37.91996 -37.24655 -35.28041 -34.33209 -34.12547 -33.31254 -30.09000 -29.32403 -28.31064 -28.26866 -26.89514 -26.16059 -24.94109 -24.18562 -22.67679 -22.26290 -21.40422 -20.77900 -20.31856 -19.04722 -18.86342 -18.61944 -18.01845 -17.59918 -17.51804 -17.12065 -17.03031 -16.94796 -16.37385 -16.29879 -15.87417 -15.57750 -15.38361 -15.31726 -14.70829 -14.52618 -14.38184 -14.26560 -14.13264 -14.06311 -14.00516 -13.66182 -13.62469 -13.40323 -13.22183 -13.14598 -12.98929 -12.82081 -12.80677 -12.61106 -12.50183 -12.38305 -12.19579 -12.11243 -11.98391 -11.83287 -11.48006 -11.31288 -11.27302 -10.95953 -10.93321 -10.58556 -10.13541 -9.64703 -5.15259 0.06140 0.74660 1.08705 1.20454 1.34611 1.60040 1.69987 1.90103 1.96472 2.03431 3.11408 3.14418 3.27255 3.32558 3.48419 3.58398 3.62802 3.64570 3.79735 3.85318 3.85727 3.99178 4.06914 4.10237 4.12661 4.19643 4.35246 4.40725 4.43943 4.49083 4.54342 4.56781 4.58276 4.59789 4.64753 4.69926 4.77129 4.79861 4.83556 4.89407 4.93111 4.95078 4.98819 5.08344 5.12175 5.17867 5.34852 5.38477 5.43211 5.50748 5.62614 5.85317 6.40925 6.44097 6.78864 7.45112 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 C 0.105 3.895 3 C -0.239 4.239 4 C 0.545 3.455 5 O -0.510 6.510 6 O -0.346 6.346 7 C 0.081 3.919 8 C -0.108 4.108 9 H 0.111 0.889 10 C -0.135 4.135 11 C 0.141 3.859 12 H 0.123 0.877 13 N -0.702 5.702 14 C 0.650 3.350 15 O -0.566 6.566 16 O -0.366 6.366 17 C 0.136 3.864 18 C -0.184 4.184 19 C -0.142 4.142 20 C -0.184 4.184 21 C -0.148 4.148 22 C -0.119 4.119 23 C -0.022 4.022 24 C -0.034 4.034 25 O -0.543 6.543 26 Si 0.710 3.290 27 O -0.171 6.171 28 H 0.097 0.903 29 H 0.085 0.915 30 H 0.112 0.888 31 H 0.074 0.926 32 H 0.076 0.924 33 H 0.093 0.907 34 H 0.086 0.914 35 H 0.407 0.593 36 H 0.060 0.940 37 H 0.072 0.928 38 H 0.087 0.913 39 H 0.067 0.933 40 H 0.082 0.918 41 H 0.067 0.933 42 H 0.087 0.913 43 H 0.072 0.928 44 H 0.059 0.941 45 H 0.080 0.920 46 H 0.088 0.912 47 H 0.168 0.832 48 H 0.096 0.904 49 H 0.392 0.608 50 H -0.252 1.252 51 H -0.250 1.250 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.588 -2.086 1.125 2.852 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C 0.052 3.948 3 C -0.241 4.241 4 C 0.391 3.609 5 O -0.400 6.400 6 O -0.262 6.262 7 C 0.007 3.993 8 C -0.127 4.127 9 H 0.129 0.871 10 C -0.174 4.174 11 C 0.037 3.963 12 H 0.141 0.859 13 N -0.360 5.360 14 C 0.404 3.596 15 O -0.455 6.455 16 O -0.280 6.280 17 C 0.100 3.900 18 C -0.241 4.241 19 C -0.199 4.199 20 C -0.241 4.241 21 C -0.186 4.186 22 C -0.138 4.138 23 C -0.069 4.069 24 C -0.144 4.144 25 O -0.350 6.350 26 Si 0.609 3.391 27 O -0.069 6.069 28 H 0.115 0.885 29 H 0.104 0.896 30 H 0.130 0.870 31 H 0.093 0.907 32 H 0.094 0.906 33 H 0.111 0.889 34 H 0.105 0.895 35 H 0.242 0.758 36 H 0.079 0.921 37 H 0.091 0.909 38 H 0.106 0.894 39 H 0.086 0.914 40 H 0.101 0.899 41 H 0.086 0.914 42 H 0.106 0.894 43 H 0.091 0.909 44 H 0.079 0.921 45 H 0.099 0.901 46 H 0.107 0.893 47 H 0.185 0.815 48 H 0.114 0.886 49 H 0.241 0.759 50 H -0.176 1.176 51 H -0.174 1.174 Dipole moment (debyes) X Y Z Total from point charges 0.633 -2.311 0.962 2.582 hybrid contribution -0.418 0.949 0.208 1.057 sum 0.215 -1.363 1.169 1.808 Atomic orbital electron populations 1.20769 0.83021 1.05679 1.05105 1.22945 0.94071 0.82689 0.95092 1.20183 0.94035 0.90626 1.19279 1.19791 0.83621 0.85041 0.72417 1.90840 1.17884 1.84384 1.46916 1.86560 1.39261 1.16311 1.84083 1.23087 0.96277 0.76940 1.02989 1.22426 0.98099 0.93011 0.99182 0.87117 1.23396 0.99525 0.94141 1.00309 1.22502 0.99922 0.85541 0.88301 0.85905 1.44750 1.09077 1.38579 1.43611 1.18164 0.84679 0.78461 0.78290 1.90913 1.16598 1.70963 1.67009 1.86310 1.40902 1.47856 1.52959 1.22117 0.85265 0.90328 0.92303 1.22523 1.00624 1.01285 0.99680 1.21876 1.02031 0.97854 0.98140 1.22518 0.99705 1.00659 1.01223 1.23678 1.02829 0.95680 0.96451 1.22627 0.96607 0.92798 1.01761 1.21106 0.81923 0.94320 1.09510 1.23771 0.90941 1.07915 0.91746 1.86457 1.42924 1.64073 1.41587 0.95200 0.85098 0.77274 0.81523 1.83712 1.16656 1.34886 1.71624 0.88498 0.89645 0.86999 0.90750 0.90589 0.88856 0.89507 0.75828 0.92132 0.90938 0.89421 0.91418 0.89934 0.91399 0.89413 0.90939 0.92145 0.90083 0.89316 0.81487 0.88598 0.75916 1.17628 1.17361 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.04 9.89 36.00 0.36 0.31 16 2 C 0.10 0.33 7.38 -34.94 -0.26 0.07 16 3 C -0.24 -0.90 6.32 -103.30 -0.65 -1.56 16 4 C 0.55 2.20 7.95 34.38 0.27 2.48 16 5 O -0.51 -2.69 14.64 -19.29 -0.28 -2.97 16 6 O -0.35 -0.92 10.13 -40.70 -0.41 -1.33 16 7 C 0.08 0.02 5.32 37.15 0.20 0.21 16 8 C -0.11 0.16 4.03 -89.67 -0.36 -0.20 16 9 H 0.11 -0.17 8.14 -51.93 -0.42 -0.59 16 10 C -0.14 0.35 7.38 -25.92 -0.19 0.16 16 11 C 0.14 -0.11 4.24 -67.12 -0.28 -0.40 16 12 H 0.12 0.05 7.46 -51.93 -0.39 -0.33 16 13 N -0.70 -0.04 5.36 -57.93 -0.31 -0.35 16 14 C 0.65 1.96 8.06 54.05 0.44 2.39 16 15 O -0.57 -2.99 11.48 -19.28 -0.22 -3.21 16 16 O -0.37 -0.98 9.94 -40.32 -0.40 -1.38 16 17 C 0.14 0.22 1.13 -90.62 -0.10 0.11 16 18 C -0.18 -0.28 8.37 37.16 0.31 0.03 16 19 C -0.14 0.07 8.85 37.15 0.33 0.39 16 20 C -0.18 -0.29 8.37 37.16 0.31 0.02 16 21 C -0.15 0.14 7.44 -25.78 -0.19 -0.06 16 22 C -0.12 -0.35 10.91 -37.44 -0.41 -0.76 16 23 C -0.02 -0.06 6.24 -35.74 -0.22 -0.28 16 24 C -0.03 0.02 2.97 36.00 0.11 0.13 16 25 O -0.54 0.39 12.84 -35.23 -0.45 -0.06 16 26 Si 0.71 -0.93 32.08 -169.99 -5.45 -6.38 16 27 O -0.17 -0.64 8.88 7.69 0.07 -0.57 16 28 H 0.10 -0.04 8.14 -51.92 -0.42 -0.47 16 29 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 30 H 0.11 0.11 6.49 -51.92 -0.34 -0.22 16 31 H 0.07 0.00 7.85 -51.93 -0.41 -0.41 16 32 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 33 H 0.09 -0.33 8.08 -51.93 -0.42 -0.75 16 34 H 0.09 -0.26 8.14 -51.93 -0.42 -0.68 16 35 H 0.41 -0.79 8.84 -40.82 -0.36 -1.16 16 36 H 0.06 0.08 8.14 -51.93 -0.42 -0.35 16 37 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 38 H 0.09 0.32 5.88 -51.93 -0.31 0.01 16 39 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 40 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 41 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 42 H 0.09 0.33 5.88 -51.93 -0.31 0.02 16 43 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 44 H 0.06 0.08 8.14 -51.93 -0.42 -0.34 16 45 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 46 H 0.09 -0.09 7.91 -51.93 -0.41 -0.50 16 47 H 0.17 0.25 8.06 -52.49 -0.42 -0.18 16 48 H 0.10 -0.30 7.96 -51.93 -0.41 -0.71 16 49 H 0.39 -2.44 8.74 45.56 0.40 -2.04 16 50 H -0.25 -0.39 7.11 56.52 0.40 0.01 16 51 H -0.25 -0.64 7.11 56.52 0.40 -0.24 16 LS Contribution 423.40 15.07 6.38 6.38 Total: 0.00 -9.91 423.40 -9.50 -19.41 By element: Atomic # 1 Polarization: -4.54 SS G_CDS: -8.06 Total: -12.60 kcal Atomic # 6 Polarization: 3.42 SS G_CDS: -0.35 Total: 3.06 kcal Atomic # 7 Polarization: -0.04 SS G_CDS: -0.31 Total: -0.35 kcal Atomic # 8 Polarization: -7.82 SS G_CDS: -1.70 Total: -9.52 kcal Atomic # 14 Polarization: -0.93 SS G_CDS: -5.45 Total: -6.38 kcal Total LS contribution 6.38 Total: 6.38 kcal Total: -9.91 -9.50 -19.41 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_13308380_15734238.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -136.339 kcal (2) G-P(sol) polarization free energy of solvation -9.906 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -146.246 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.503 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.409 kcal (6) G-S(sol) free energy of system = (1) + (5) -155.748 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds