Wall clock time and date at job start Sat Mar 6 2021 02:48:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42909 * 1 3 3 C 1.42888 * 113.99926 * 2 1 4 4 C 1.52997 * 112.85201 * 294.12919 * 3 2 1 5 5 F 1.39902 * 109.47429 * 195.75065 * 4 3 2 6 6 F 1.39899 * 109.47131 * 315.74989 * 4 3 2 7 7 F 1.39896 * 109.47137 * 75.75487 * 4 3 2 8 8 C 1.53782 * 113.61240 * 162.82492 * 3 2 1 9 9 C 1.53783 * 87.08089 * 270.88384 * 8 3 2 10 10 H 1.09005 * 113.68834 * 220.00730 * 9 8 3 11 11 C 1.53001 * 113.61429 * 89.11875 * 9 8 3 12 12 O 1.45192 * 109.47356 * 87.50268 * 11 9 8 13 13 C 1.34772 * 117.00192 * 179.97438 * 12 11 9 14 14 O 1.21532 * 119.99719 * 359.97438 * 13 12 11 15 15 C 1.47233 * 120.00278 * 179.97438 * 13 12 11 16 16 C 1.36496 * 127.19936 * 179.97438 * 15 13 12 17 17 C 1.50698 * 125.80995 * 0.02562 * 16 15 13 18 18 O 1.33627 * 108.37813 * 180.02562 * 16 15 13 19 19 C 1.34217 * 110.92796 * 359.97438 * 18 16 15 20 20 C 1.50699 * 125.42559 * 179.97438 * 19 18 16 21 21 O 1.42907 * 109.46756 * 120.02869 * 20 19 18 22 22 Si 1.86308 * 109.47429 * 0.02986 * 20 19 18 23 23 C 1.34156 * 109.14261 * 0.26429 * 19 18 16 24 24 C 1.53778 * 113.61700 * 65.32952 * 3 2 1 25 25 H 1.09003 * 109.46316 * 303.09224 * 1 2 3 26 26 H 1.08996 * 109.47259 * 63.09008 * 1 2 3 27 27 H 1.08998 * 109.47112 * 183.09304 * 1 2 3 28 28 H 1.09002 * 113.61790 * 156.33333 * 8 3 2 29 29 H 1.09001 * 113.61815 * 25.43401 * 8 3 2 30 30 H 1.09003 * 109.46778 * 327.50118 * 11 9 8 31 31 H 1.08998 * 109.46510 * 207.50249 * 11 9 8 32 32 H 1.09001 * 109.46664 * 179.97438 * 17 16 15 33 33 H 1.08993 * 109.46990 * 299.97353 * 17 16 15 34 34 H 1.09003 * 109.46847 * 59.97975 * 17 16 15 35 35 H 1.08998 * 109.47117 * 240.02744 * 20 19 18 36 36 H 0.96701 * 113.99804 * 299.99488 * 21 20 19 37 37 H 1.48494 * 109.99652 * 58.67686 * 22 20 19 38 38 H 1.48499 * 109.99942 * 180.02562 * 22 20 19 39 39 H 1.08002 * 127.02354 * 179.73902 * 23 19 18 40 40 H 1.09000 * 113.61532 * 334.56326 * 24 3 2 41 41 H 1.09004 * 113.61765 * 203.66227 * 24 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 1.7254 2.0826 -1.2867 5 9 2.5970 3.1733 -1.3754 6 9 1.9148 1.2435 -2.3900 7 9 0.4040 2.5417 -1.2713 8 6 3.4906 1.3205 0.4161 9 6 3.0004 1.4807 1.8649 10 1 3.5975 2.1761 2.4549 11 6 2.7581 0.1502 2.5805 12 8 3.9935 -0.3003 3.1961 13 6 3.9511 -1.4656 3.8717 14 8 2.9098 -2.0881 3.9447 15 6 5.1661 -1.9847 4.5213 16 6 5.2893 -3.1397 5.2382 17 6 4.1867 -4.1301 5.5111 18 8 6.5541 -3.2428 5.6569 19 6 7.2830 -2.1944 5.2433 20 6 8.7466 -1.9800 5.5312 21 8 9.4690 -1.9110 4.3001 22 14 9.3930 -3.3981 6.5520 23 6 6.4994 -1.3646 4.5382 24 6 1.7236 2.1074 1.2804 25 1 -0.3632 0.5611 0.8610 26 1 -0.3633 0.4651 -0.9163 27 1 -0.3633 -1.0261 0.0554 28 1 4.0403 2.1847 0.0430 29 1 4.0059 0.3780 0.2311 30 1 2.4191 -0.5936 1.8595 31 1 1.9971 0.2846 3.3491 32 1 4.5780 -4.9541 6.1078 33 1 3.3820 -3.6368 6.0561 34 1 3.8028 -4.5157 4.5666 35 1 8.8760 -1.0478 6.0811 36 1 9.3988 -2.7085 3.7577 37 1 9.1933 -4.6784 5.8267 38 1 10.8354 -3.1982 6.8433 39 1 6.7890 -0.4326 4.0757 40 1 0.8122 1.8001 1.7932 41 1 1.7900 3.1868 1.1436 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_13308380_17321610.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 02:48:28 Heat of formation + Delta-G solvation = -257.430887 kcal Electronic energy + Delta-G solvation = -32011.538005 eV Core-core repulsion = 26832.963701 eV Total energy + Delta-G solvation = -5178.574304 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.111 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -51.17125 -48.71781 -48.60281 -43.83203 -41.75674 -40.79404 -38.22717 -37.71572 -36.86136 -34.26696 -33.24512 -30.84206 -29.56214 -28.35820 -27.56186 -26.91548 -25.94212 -24.51109 -23.35627 -22.53885 -20.89478 -20.43309 -19.77697 -19.46426 -19.22475 -19.04375 -18.35994 -17.87797 -17.41777 -17.40385 -17.11807 -16.71755 -16.53914 -16.00213 -15.90673 -15.70931 -15.57745 -15.50674 -15.19204 -15.04399 -14.82540 -14.76037 -14.62610 -14.43066 -14.23858 -14.19287 -13.98974 -13.93428 -13.67653 -13.43103 -13.22993 -13.03545 -12.94247 -12.83369 -12.41745 -12.15693 -12.10652 -11.78242 -11.62319 -11.54213 -11.00141 -10.86738 -10.78894 -9.67743 -5.02754 0.08053 0.75447 1.09041 1.29689 1.54586 1.59647 1.68507 1.88296 1.99107 2.04127 2.52979 2.61509 2.82244 3.05873 3.17401 3.27270 3.32001 3.42082 3.58900 3.67168 3.85288 4.04524 4.07123 4.14071 4.19897 4.24468 4.24811 4.32066 4.38637 4.43368 4.46324 4.47695 4.56261 4.56572 4.64288 4.67075 4.71277 4.90656 5.00496 5.16300 5.42679 5.61268 5.82755 6.18819 6.80120 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.010 3.990 2 O -0.332 6.332 3 C 0.038 3.962 4 C 0.437 3.563 5 F -0.175 7.175 6 F -0.174 7.174 7 F -0.181 7.181 8 C -0.112 4.112 9 C -0.100 4.100 10 H 0.108 0.892 11 C 0.080 3.920 12 O -0.347 6.347 13 C 0.543 3.457 14 O -0.507 6.507 15 C -0.240 4.240 16 C 0.106 3.894 17 C -0.082 4.082 18 O -0.163 6.163 19 C -0.062 4.062 20 C -0.033 4.033 21 O -0.520 6.520 22 Si 0.702 3.298 23 C -0.125 4.125 24 C -0.143 4.143 25 H 0.056 0.944 26 H 0.054 0.946 27 H 0.103 0.897 28 H 0.117 0.883 29 H 0.098 0.902 30 H 0.092 0.908 31 H 0.076 0.924 32 H 0.085 0.915 33 H 0.101 0.899 34 H 0.100 0.900 35 H 0.138 0.862 36 H 0.381 0.619 37 H -0.256 1.256 38 H -0.248 1.248 39 H 0.165 0.835 40 H 0.095 0.905 41 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.336 -0.079 4.142 4.157 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 O -0.250 6.250 3 C -0.005 4.005 4 C 0.383 3.617 5 F -0.156 7.156 6 F -0.155 7.155 7 F -0.163 7.163 8 C -0.149 4.149 9 C -0.118 4.118 10 H 0.126 0.874 11 C 0.006 3.994 12 O -0.264 6.264 13 C 0.389 3.611 14 O -0.397 6.397 15 C -0.243 4.243 16 C 0.053 3.947 17 C -0.138 4.138 18 O -0.060 6.060 19 C -0.109 4.109 20 C -0.143 4.143 21 O -0.326 6.326 22 Si 0.601 3.399 23 C -0.144 4.144 24 C -0.180 4.180 25 H 0.074 0.926 26 H 0.072 0.928 27 H 0.121 0.879 28 H 0.136 0.864 29 H 0.117 0.883 30 H 0.111 0.889 31 H 0.094 0.906 32 H 0.103 0.897 33 H 0.120 0.880 34 H 0.118 0.882 35 H 0.156 0.844 36 H 0.229 0.771 37 H -0.180 1.180 38 H -0.172 1.172 39 H 0.183 0.817 40 H 0.114 0.886 41 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges 0.285 -0.694 4.538 4.600 hybrid contribution -0.577 0.483 -1.808 1.959 sum -0.292 -0.210 2.730 2.754 Atomic orbital electron populations 1.23154 0.79378 1.04476 1.01534 1.88097 1.21249 1.21811 1.93821 1.24045 1.00058 0.86403 0.89962 1.21165 0.74317 0.78718 0.87533 1.93181 1.69503 1.56318 1.96608 1.93221 1.94769 1.70956 1.56573 1.93190 1.36509 1.89751 1.96841 1.23275 0.90905 1.05797 0.94943 1.22107 0.97623 0.96469 0.95618 0.87406 1.22993 0.83853 0.95510 0.97025 1.86500 1.38733 1.37851 1.63327 1.19802 0.87025 0.78650 0.75602 1.90866 1.31809 1.58314 1.58718 1.20186 0.93892 0.99266 1.10923 1.22915 0.83706 0.95357 0.92710 1.20639 0.92402 0.96099 1.04690 1.83704 1.19189 1.41934 1.61147 1.22627 0.95603 0.88473 1.04209 1.24358 0.84036 1.13279 0.92596 1.86673 1.71172 1.43347 1.31448 0.94426 0.82399 0.75411 0.87694 1.22660 0.90047 1.01019 1.00722 1.23600 0.99600 1.01152 0.93658 0.92589 0.92772 0.87906 0.86438 0.88298 0.88942 0.90589 0.89654 0.88035 0.88155 0.84410 0.77053 1.17991 1.17217 0.81714 0.88610 0.86796 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.33 101.05 1.04 1.03 16 2 O -0.33 -0.26 8.36 -35.23 -0.29 -0.56 16 3 C 0.04 -0.01 0.84 -89.81 -0.08 -0.08 16 4 C 0.44 0.54 2.52 37.16 0.09 0.63 16 5 F -0.17 -0.21 15.82 2.25 0.04 -0.17 16 6 F -0.17 -0.53 17.11 2.25 0.04 -0.49 16 7 F -0.18 -0.27 15.34 2.25 0.03 -0.23 16 8 C -0.11 0.13 6.89 -25.92 -0.18 -0.05 16 9 C -0.10 0.16 4.21 -89.81 -0.38 -0.21 16 10 H 0.11 -0.27 8.14 -51.93 -0.42 -0.69 16 11 C 0.08 0.02 5.06 37.16 0.19 0.21 16 12 O -0.35 -0.70 10.13 -40.69 -0.41 -1.11 16 13 C 0.54 1.68 7.95 34.39 0.27 1.95 16 14 O -0.51 -2.31 15.46 -19.29 -0.30 -2.61 16 15 C -0.24 -0.50 6.32 -103.30 -0.65 -1.15 16 16 C 0.11 0.10 7.38 -34.94 -0.26 -0.16 16 17 C -0.08 0.11 9.14 36.00 0.33 0.44 16 18 O -0.16 -0.10 8.88 7.71 0.07 -0.03 16 19 C -0.06 -0.01 6.20 -35.75 -0.22 -0.23 16 20 C -0.03 0.04 2.97 36.01 0.11 0.15 16 21 O -0.52 0.04 12.87 -35.23 -0.45 -0.41 16 22 Si 0.70 -1.10 32.09 -169.99 -5.45 -6.55 16 23 C -0.13 -0.13 10.91 -37.45 -0.41 -0.53 16 24 C -0.14 0.32 6.52 -25.92 -0.17 0.15 16 25 H 0.06 -0.13 6.60 -51.93 -0.34 -0.47 16 26 H 0.05 -0.03 6.56 -51.93 -0.34 -0.37 16 27 H 0.10 -0.21 8.14 -51.93 -0.42 -0.63 16 28 H 0.12 -0.26 7.03 -51.93 -0.37 -0.62 16 29 H 0.10 -0.04 8.10 -51.93 -0.42 -0.46 16 30 H 0.09 0.13 6.12 -51.93 -0.32 -0.19 16 31 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 32 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 33 H 0.10 -0.14 8.08 -51.93 -0.42 -0.56 16 34 H 0.10 -0.11 8.08 -51.93 -0.42 -0.53 16 35 H 0.14 -0.38 7.96 -51.93 -0.41 -0.79 16 36 H 0.38 -1.04 8.70 45.56 0.40 -0.65 16 37 H -0.26 -0.28 7.11 56.52 0.40 0.12 16 38 H -0.25 -0.26 7.11 56.52 0.40 0.15 16 39 H 0.17 0.01 8.06 -52.49 -0.42 -0.41 16 40 H 0.10 -0.28 6.64 -51.93 -0.34 -0.62 16 41 H 0.11 -0.37 8.04 -51.93 -0.42 -0.78 16 LS Contribution 360.04 15.07 5.43 5.43 Total: 0.00 -6.92 360.04 -6.33 -13.26 By element: Atomic # 1 Polarization: -3.93 SS G_CDS: -4.72 Total: -8.64 kcal Atomic # 6 Polarization: 2.43 SS G_CDS: -0.31 Total: 2.13 kcal Atomic # 8 Polarization: -3.33 SS G_CDS: -1.39 Total: -4.72 kcal Atomic # 9 Polarization: -1.00 SS G_CDS: 0.11 Total: -0.89 kcal Atomic # 14 Polarization: -1.10 SS G_CDS: -5.45 Total: -6.55 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -6.92 -6.33 -13.26 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_13308380_17321610.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -244.176 kcal (2) G-P(sol) polarization free energy of solvation -6.922 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -251.098 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.333 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.255 kcal (6) G-S(sol) free energy of system = (1) + (5) -257.431 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds