Wall clock time and date at job start Sat Mar 6 2021 03:09:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.36496 * 125.80717 * 2 1 4 4 C 1.47231 * 127.20133 * 359.97438 * 3 2 1 5 5 O 1.21532 * 120.00209 * 0.02562 * 4 3 2 6 6 O 1.34774 * 119.99836 * 180.02562 * 4 3 2 7 7 C 1.45194 * 117.00102 * 180.02562 * 6 4 3 8 8 Si 1.86300 * 109.47111 * 74.99758 * 7 6 4 9 9 C 1.86307 * 109.46831 * 60.00348 * 8 7 6 10 10 C 1.86304 * 109.47197 * 179.97438 * 8 7 6 11 11 C 1.86295 * 109.47300 * 300.00515 * 8 7 6 12 12 C 1.47058 * 105.59677 * 179.97438 * 3 2 1 13 13 C 1.34164 * 105.94897 * 359.97438 * 12 3 2 14 14 C 1.50704 * 125.42657 * 179.97438 * 13 12 3 15 15 O 1.42900 * 109.47058 * 299.99952 * 14 13 12 16 16 Si 1.86295 * 109.46899 * 180.02562 * 14 13 12 17 17 H 1.48501 * 109.47379 * 60.00179 * 16 14 13 18 18 H 1.48500 * 109.46995 * 179.97438 * 16 14 13 19 19 H 1.48499 * 109.47167 * 300.00334 * 16 14 13 20 20 O 1.33628 * 125.80853 * 179.97438 * 2 1 3 21 21 H 1.08999 * 109.47161 * 180.02562 * 1 2 3 22 22 H 1.09002 * 109.47120 * 300.00140 * 1 2 3 23 23 H 1.08995 * 109.47555 * 60.00124 * 1 2 3 24 24 H 1.09004 * 109.47485 * 195.00259 * 7 6 4 25 25 H 1.09005 * 109.47076 * 315.00084 * 7 6 4 26 26 H 1.09004 * 109.46961 * 59.99991 * 9 8 7 27 27 H 1.08997 * 109.47033 * 179.97438 * 9 8 7 28 28 H 1.09001 * 109.47201 * 299.99954 * 9 8 7 29 29 H 1.09005 * 109.46898 * 60.00382 * 10 8 7 30 30 H 1.08995 * 109.46898 * 180.02562 * 10 8 7 31 31 H 1.08997 * 109.47189 * 300.00671 * 10 8 7 32 32 H 1.08997 * 109.47632 * 59.99642 * 11 8 7 33 33 H 1.09007 * 109.46898 * 179.97438 * 11 8 7 34 34 H 1.08998 * 109.47166 * 299.99371 * 11 8 7 35 35 H 1.07999 * 127.02824 * 180.25994 * 12 3 2 36 36 H 1.08999 * 109.47033 * 59.99830 * 14 13 12 37 37 H 0.96697 * 114.00189 * 300.00072 * 15 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3055 1.1070 0.0000 4 6 1.8753 2.5150 -0.0005 5 8 0.6912 2.7886 -0.0006 6 8 2.7946 3.5005 -0.0010 7 6 2.2983 4.8650 -0.0009 8 14 1.6594 5.2933 1.6959 9 6 3.0394 5.1344 2.9374 10 6 1.0232 7.0444 1.6962 11 6 0.2776 4.1297 2.1512 12 6 3.6856 0.5989 0.0006 13 6 3.5859 -0.7390 0.0015 14 6 4.7456 -1.7014 0.0019 15 8 5.5421 -1.4880 -1.1652 16 14 4.1017 -3.4496 0.0024 17 1 3.2738 -3.6726 -1.2101 18 1 5.2445 -4.3979 0.0021 19 1 3.2737 -3.6717 1.2148 20 8 2.2888 -1.0837 0.0005 21 1 -0.3633 -1.0276 0.0005 22 1 -0.3633 0.5139 0.8900 23 1 -0.3634 0.5138 -0.8899 24 1 3.1068 5.5458 -0.2673 25 1 1.4909 4.9580 -0.7273 26 1 3.8479 5.8153 2.6710 27 1 2.6658 5.3855 3.9301 28 1 3.4121 4.1101 2.9373 29 1 0.2159 7.1378 0.9698 30 1 0.6499 7.2950 2.6891 31 1 1.8320 7.7248 1.4300 32 1 0.6501 3.1054 2.1511 33 1 -0.0959 4.3801 3.1442 34 1 -0.5299 4.2227 1.4249 35 1 4.5938 1.1833 0.0047 36 1 5.3535 -1.5374 0.8916 37 1 5.0646 -1.6168 -1.9962 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_13308380_4858416.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 03:09:56 Heat of formation + Delta-G solvation = -138.085927 kcal Electronic energy + Delta-G solvation = -19477.005577 eV Core-core repulsion = 16345.282853 eV Total energy + Delta-G solvation = -3131.722724 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 272.108 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -43.81267 -41.07171 -38.11086 -37.25894 -34.24523 -33.20626 -29.86871 -29.53291 -28.47888 -28.34338 -28.12686 -25.80413 -24.29181 -22.46770 -20.57225 -19.01260 -18.32307 -17.86725 -17.46614 -17.10228 -16.77209 -15.90917 -15.86750 -14.90314 -14.51641 -14.44421 -14.34539 -14.11617 -14.01642 -13.93123 -13.91028 -13.79055 -13.39553 -13.25686 -13.06046 -13.03727 -12.91979 -12.87160 -12.47004 -12.23770 -12.10018 -11.48362 -10.92175 -10.90392 -10.76382 -10.66545 -10.35469 -9.63430 0.11519 0.77895 0.98689 1.26952 1.41127 1.49199 1.55950 1.68809 1.84118 1.86354 2.05095 2.15361 2.54256 3.13340 3.35510 3.70121 3.89355 4.08398 4.22704 4.27341 4.45943 4.47756 4.58215 4.65044 4.67024 4.68972 4.70705 4.75074 4.77739 4.89513 4.95261 5.01991 5.19723 5.41302 5.46242 5.52044 5.73321 5.86012 6.32334 6.88390 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 C 0.103 3.897 3 C -0.238 4.238 4 C 0.526 3.474 5 O -0.494 6.494 6 O -0.329 6.329 7 C -0.238 4.238 8 Si 0.998 3.002 9 C -0.446 4.446 10 C -0.446 4.446 11 C -0.435 4.435 12 C -0.125 4.125 13 C -0.066 4.066 14 C -0.039 4.039 15 O -0.528 6.528 16 Si 0.956 3.044 17 H -0.249 1.249 18 H -0.244 1.244 19 H -0.246 1.246 20 O -0.169 6.169 21 H 0.082 0.918 22 H 0.101 0.899 23 H 0.101 0.899 24 H 0.109 0.891 25 H 0.080 0.920 26 H 0.070 0.930 27 H 0.071 0.929 28 H 0.070 0.930 29 H 0.071 0.929 30 H 0.074 0.926 31 H 0.070 0.930 32 H 0.065 0.935 33 H 0.061 0.939 34 H 0.077 0.923 35 H 0.167 0.833 36 H 0.138 0.862 37 H 0.381 0.619 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.049 -0.546 0.323 0.636 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.138 4.138 2 C 0.050 3.950 3 C -0.240 4.240 4 C 0.372 3.628 5 O -0.385 6.385 6 O -0.245 6.245 7 C -0.356 4.356 8 Si 1.194 2.806 9 C -0.554 4.554 10 C -0.554 4.554 11 C -0.543 4.543 12 C -0.144 4.144 13 C -0.113 4.113 14 C -0.150 4.150 15 O -0.334 6.334 16 Si 0.776 3.224 17 H -0.172 1.172 18 H -0.167 1.167 19 H -0.169 1.169 20 O -0.066 6.066 21 H 0.101 0.899 22 H 0.120 0.880 23 H 0.119 0.881 24 H 0.128 0.872 25 H 0.099 0.901 26 H 0.089 0.911 27 H 0.090 0.910 28 H 0.089 0.911 29 H 0.090 0.910 30 H 0.093 0.907 31 H 0.089 0.911 32 H 0.084 0.916 33 H 0.081 0.919 34 H 0.096 0.904 35 H 0.184 0.816 36 H 0.155 0.845 37 H 0.229 0.771 Dipole moment (debyes) X Y Z Total from point charges -0.198 -1.459 0.715 1.637 hybrid contribution -0.172 0.810 -0.536 0.986 sum -0.370 -0.650 0.179 0.769 Atomic orbital electron populations 1.20635 0.83095 1.04471 1.05624 1.22888 0.94061 0.82754 0.95317 1.20210 0.94026 0.90723 1.19060 1.19880 0.84060 0.85297 0.73591 1.90845 1.17642 1.84053 1.45940 1.86493 1.38465 1.15663 1.83868 1.28360 1.05935 0.81055 1.20288 0.79710 0.67728 0.68083 0.65053 1.26068 1.13074 1.04860 1.11430 1.26041 1.06495 1.17939 1.04958 1.26227 1.13374 1.10010 1.04713 1.22680 0.96691 0.92995 1.02015 1.22733 0.82647 0.95909 1.10046 1.24385 0.90392 1.07330 0.92849 1.86579 1.38161 1.93334 1.15287 0.85536 0.80137 0.73987 0.82747 1.17161 1.16723 1.16924 1.83694 1.16710 1.34751 1.71421 0.89859 0.88013 0.88066 0.87249 0.90103 0.91080 0.91008 0.91075 0.90962 0.90665 0.91055 0.91565 0.91944 0.90357 0.81570 0.84475 0.77063 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 0.07 9.14 36.00 0.33 0.40 16 2 C 0.10 0.15 7.38 -34.94 -0.26 -0.11 16 3 C -0.24 -0.58 6.32 -103.30 -0.65 -1.24 16 4 C 0.53 1.61 6.73 34.38 0.23 1.84 16 5 O -0.49 -1.79 11.37 -19.29 -0.22 -2.01 16 6 O -0.33 -0.81 9.83 -40.69 -0.40 -1.21 16 7 C -0.24 -0.05 5.40 101.05 0.55 0.49 16 8 Si 1.00 -1.09 12.12 -169.99 -2.06 -3.15 16 9 C -0.45 0.18 8.65 101.05 0.87 1.05 16 10 C -0.45 0.52 8.65 101.05 0.87 1.40 16 11 C -0.44 -0.42 7.10 101.05 0.72 0.30 16 12 C -0.12 -0.18 10.91 -37.44 -0.41 -0.59 16 13 C -0.07 -0.05 6.20 -35.74 -0.22 -0.27 16 14 C -0.04 0.05 2.98 36.01 0.11 0.15 16 15 O -0.53 0.40 12.86 -35.23 -0.45 -0.05 16 16 Si 0.96 -0.99 27.37 -169.99 -4.65 -5.64 16 17 H -0.25 0.05 7.11 56.52 0.40 0.45 16 18 H -0.24 0.06 7.11 56.52 0.40 0.46 16 19 H -0.25 -0.02 7.11 56.52 0.40 0.38 16 20 O -0.17 -0.24 8.88 7.72 0.07 -0.17 16 21 H 0.08 -0.20 8.14 -51.93 -0.42 -0.63 16 22 H 0.10 -0.10 8.08 -51.93 -0.42 -0.52 16 23 H 0.10 -0.10 8.08 -51.93 -0.42 -0.52 16 24 H 0.11 -0.17 7.96 -51.93 -0.41 -0.59 16 25 H 0.08 0.04 7.52 -51.93 -0.39 -0.35 16 26 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 27 H 0.07 -0.04 7.96 -51.93 -0.41 -0.46 16 28 H 0.07 0.03 7.96 -51.93 -0.41 -0.39 16 29 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 30 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 31 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 32 H 0.07 0.14 6.28 -51.93 -0.33 -0.18 16 33 H 0.06 0.02 7.96 -51.93 -0.41 -0.39 16 34 H 0.08 0.14 7.42 -51.93 -0.39 -0.25 16 35 H 0.17 0.07 8.06 -52.49 -0.42 -0.35 16 36 H 0.14 -0.37 7.96 -51.93 -0.41 -0.79 16 37 H 0.38 -1.46 8.70 45.56 0.40 -1.06 16 LS Contribution 317.16 15.07 4.78 4.78 Total: 0.00 -5.47 317.16 -5.71 -11.18 By element: Atomic # 1 Polarization: -2.26 SS G_CDS: -4.91 Total: -7.17 kcal Atomic # 6 Polarization: 1.30 SS G_CDS: 2.14 Total: 3.44 kcal Atomic # 8 Polarization: -2.44 SS G_CDS: -1.00 Total: -3.44 kcal Atomic # 14 Polarization: -2.07 SS G_CDS: -6.71 Total: -8.79 kcal Total LS contribution 4.78 Total: 4.78 kcal Total: -5.47 -5.71 -11.18 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_13308380_4858416.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -126.910 kcal (2) G-P(sol) polarization free energy of solvation -5.471 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -132.380 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.705 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -11.176 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.086 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds