Wall clock time and date at job start Sat Mar 6 2021 05:13:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35998 * 117.00183 * 2 1 4 4 C 1.39108 * 120.06472 * 180.02562 * 3 2 1 5 5 O 1.36021 * 120.07697 * 359.96869 * 4 3 2 6 6 C 1.42895 * 117.00004 * 269.72724 * 5 4 3 7 7 C 1.52999 * 109.47266 * 270.00053 * 6 5 4 8 8 C 1.50706 * 109.47247 * 150.00062 * 6 5 4 9 9 O 1.20830 * 119.99594 * 5.00189 * 8 6 5 10 10 O 1.34222 * 120.00024 * 184.72473 * 8 6 5 11 11 C 1.45201 * 116.99867 * 180.02562 * 10 8 6 12 12 Si 1.86298 * 109.47445 * 74.99967 * 11 10 8 13 13 C 1.86302 * 109.46950 * 59.99792 * 12 11 10 14 14 C 1.86293 * 109.47351 * 180.02562 * 12 11 10 15 15 C 1.86308 * 109.47033 * 300.00441 * 12 11 10 16 16 C 1.38665 * 119.84178 * 179.69749 * 4 3 2 17 17 Cl 1.73611 * 120.00541 * 180.24878 * 16 4 3 18 18 C 1.38327 * 119.98428 * 0.27701 * 16 4 3 19 19 C 1.38258 * 120.13035 * 0.02562 * 18 16 4 20 20 C 1.50699 * 119.92149 * 179.97438 * 19 18 16 21 21 O 1.42896 * 109.47427 * 120.00070 * 20 19 18 22 22 Si 1.86304 * 109.47350 * 359.97438 * 20 19 18 23 23 H 1.48499 * 109.46915 * 60.00044 * 22 20 19 24 24 H 1.48500 * 109.46909 * 180.02562 * 22 20 19 25 25 H 1.48500 * 109.46843 * 300.00058 * 22 20 19 26 26 C 1.38228 * 120.15532 * 359.95823 * 19 18 16 27 27 H 1.08997 * 109.46889 * 300.00660 * 1 2 3 28 28 H 1.09006 * 109.46964 * 60.00043 * 1 2 3 29 29 H 1.08997 * 109.47415 * 180.02562 * 1 2 3 30 30 H 1.09003 * 109.47109 * 30.00540 * 6 5 4 31 31 H 1.08995 * 109.47123 * 300.00298 * 7 6 5 32 32 H 1.09002 * 109.47253 * 60.00492 * 7 6 5 33 33 H 1.08999 * 109.46938 * 179.97438 * 7 6 5 34 34 H 1.08998 * 109.47305 * 195.00168 * 11 10 8 35 35 H 1.09008 * 109.47218 * 315.00059 * 11 10 8 36 36 H 1.09007 * 109.46996 * 60.00323 * 13 12 11 37 37 H 1.08998 * 109.47181 * 179.97438 * 13 12 11 38 38 H 1.08994 * 109.47344 * 300.00520 * 13 12 11 39 39 H 1.08995 * 109.47697 * 59.99999 * 14 12 11 40 40 H 1.09007 * 109.47270 * 180.02562 * 14 12 11 41 41 H 1.09007 * 109.46958 * 299.99900 * 14 12 11 42 42 H 1.08994 * 109.47160 * 59.99541 * 15 12 11 43 43 H 1.08998 * 109.46711 * 179.97438 * 15 12 11 44 44 H 1.09001 * 109.46462 * 299.99519 * 15 12 11 45 45 H 1.08000 * 119.93530 * 180.02562 * 18 16 4 46 46 H 1.08999 * 109.47099 * 239.99942 * 20 19 18 47 47 H 0.96699 * 114.00066 * 300.00112 * 21 20 19 48 48 H 1.07995 * 119.99322 * 180.02562 * 26 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2117 0.0000 4 6 3.4355 1.2861 -0.0005 5 8 4.1792 0.1471 -0.0004 6 6 4.5393 -0.3924 1.2728 7 6 5.8757 0.2037 1.7197 8 6 4.6681 -1.8901 1.1657 9 8 4.5607 -2.4302 0.0901 10 8 4.9075 -2.6234 2.2641 11 6 5.0200 -4.0600 2.0859 12 14 6.6644 -4.4625 1.3083 13 6 8.0380 -3.8646 2.4159 14 6 6.8084 -6.3057 1.0790 15 6 6.7910 -3.6194 -0.3482 16 6 4.0603 2.5240 -0.0069 17 17 5.7936 2.6217 -0.0141 18 6 3.3021 3.6810 -0.0069 19 6 1.9216 3.6061 0.0000 20 6 1.1002 4.8696 0.0006 21 8 0.2702 4.8987 -1.1622 22 14 2.2343 6.3476 -0.0081 23 1 3.0856 6.3112 -1.2243 24 1 1.4249 7.5926 -0.0069 25 1 3.0964 6.3171 1.2007 26 6 1.2930 2.3750 0.0060 27 1 -0.3633 0.5139 0.8899 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3634 -1.0276 0.0005 30 1 3.7689 -0.1453 2.0032 31 1 6.6461 -0.0434 0.9893 32 1 5.7826 1.2869 1.7973 33 1 6.1502 -0.2075 2.6911 34 1 4.9460 -4.5533 3.0551 35 1 4.2163 -4.4099 1.4378 36 1 7.9639 -4.3579 3.3851 37 1 9.0001 -4.1005 1.9612 38 1 7.9535 -2.7862 2.5496 39 1 6.0049 -6.6552 0.4309 40 1 7.7708 -6.5412 0.6245 41 1 6.7342 -6.7993 2.0481 42 1 6.7065 -2.5411 -0.2145 43 1 7.7533 -3.8546 -0.8029 44 1 5.9873 -3.9693 -0.9962 45 1 3.7896 4.6447 -0.0122 46 1 0.4757 4.8965 0.8935 47 1 0.7600 4.8772 -1.9957 48 1 0.2145 2.3196 0.0110 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_13428716_4858416.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 05:13:05 Heat of formation + Delta-G solvation = -190.780516 kcal Electronic energy + Delta-G solvation = -31441.731182 eV Core-core repulsion = 27034.402467 eV Total energy + Delta-G solvation = -4407.328715 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 376.116 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -42.04157 -41.35064 -39.48841 -39.21700 -37.85958 -37.19039 -36.93764 -33.42972 -31.56715 -31.40557 -29.69803 -28.71081 -28.46544 -28.29255 -28.13327 -26.82551 -25.26253 -23.75325 -22.90697 -21.80293 -19.71060 -18.94347 -18.64642 -18.41616 -17.83976 -17.61409 -17.30355 -16.92212 -16.38224 -16.21742 -16.15515 -15.92762 -15.65860 -15.09031 -14.83638 -14.63329 -14.27680 -14.22765 -14.00932 -13.95718 -13.94120 -13.77591 -13.69889 -13.38415 -13.35574 -13.21065 -13.07010 -13.01314 -12.80789 -12.78433 -12.57941 -12.47656 -12.39215 -12.25051 -12.00349 -11.87022 -11.71907 -11.37949 -11.04760 -10.86549 -10.69377 -10.63563 -10.36226 -9.85841 -9.45567 -0.38452 -0.06404 0.82497 0.98368 1.22334 1.28876 1.33898 1.40021 1.55505 1.80432 1.85826 1.87349 2.10626 2.16004 2.55988 2.70238 3.19976 3.40100 3.66240 3.71836 3.76120 3.81850 3.89535 3.91749 4.02022 4.10727 4.13929 4.22107 4.35664 4.47253 4.56414 4.62846 4.64978 4.66376 4.68034 4.70421 4.74852 4.77358 4.77743 4.95271 5.01470 5.02318 5.09352 5.14831 5.41288 5.45238 5.52356 5.80993 5.85595 6.30123 6.36211 6.88132 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 O -0.298 6.298 3 C 0.133 3.867 4 C 0.070 3.930 5 O -0.284 6.284 6 C 0.104 3.896 7 C -0.183 4.183 8 C 0.448 3.552 9 O -0.464 6.464 10 O -0.334 6.334 11 C -0.238 4.238 12 Si 0.996 3.004 13 C -0.445 4.445 14 C -0.446 4.446 15 C -0.436 4.436 16 C -0.007 4.007 17 Cl -0.034 7.034 18 C -0.145 4.145 19 C -0.067 4.067 20 C -0.081 4.081 21 O -0.535 6.535 22 Si 0.942 3.058 23 H -0.246 1.246 24 H -0.249 1.249 25 H -0.245 1.245 26 C -0.166 4.166 27 H 0.060 0.940 28 H 0.062 0.938 29 H 0.106 0.894 30 H 0.100 0.900 31 H 0.076 0.924 32 H 0.084 0.916 33 H 0.084 0.916 34 H 0.110 0.890 35 H 0.080 0.920 36 H 0.070 0.930 37 H 0.071 0.929 38 H 0.070 0.930 39 H 0.071 0.929 40 H 0.075 0.925 41 H 0.070 0.930 42 H 0.067 0.933 43 H 0.062 0.938 44 H 0.077 0.923 45 H 0.139 0.861 46 H 0.125 0.875 47 H 0.380 0.620 48 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.578 1.433 3.184 3.831 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.211 6.211 3 C 0.085 3.915 4 C 0.025 3.975 5 O -0.200 6.200 6 C 0.047 3.953 7 C -0.240 4.240 8 C 0.288 3.712 9 O -0.349 6.349 10 O -0.251 6.251 11 C -0.356 4.356 12 Si 1.192 2.808 13 C -0.553 4.553 14 C -0.554 4.554 15 C -0.544 4.544 16 C -0.035 4.035 17 Cl -0.005 7.005 18 C -0.164 4.164 19 C -0.068 4.068 20 C -0.191 4.191 21 O -0.340 6.340 22 Si 0.764 3.236 23 H -0.169 1.169 24 H -0.172 1.172 25 H -0.169 1.169 26 C -0.185 4.185 27 H 0.079 0.921 28 H 0.081 0.919 29 H 0.124 0.876 30 H 0.117 0.883 31 H 0.095 0.905 32 H 0.102 0.898 33 H 0.103 0.897 34 H 0.129 0.871 35 H 0.099 0.901 36 H 0.089 0.911 37 H 0.091 0.909 38 H 0.090 0.910 39 H 0.090 0.910 40 H 0.094 0.906 41 H 0.089 0.911 42 H 0.086 0.914 43 H 0.081 0.919 44 H 0.096 0.904 45 H 0.157 0.843 46 H 0.143 0.857 47 H 0.227 0.773 48 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -1.271 1.669 3.170 3.801 hybrid contribution -0.174 -0.457 -0.279 0.563 sum -1.445 1.213 2.891 3.452 Atomic orbital electron populations 1.23238 0.77363 1.04823 1.01878 1.86237 1.22023 1.25149 1.87657 1.19239 0.90828 0.85624 0.95763 1.17520 0.86531 0.85347 1.08145 1.86252 1.69527 1.37751 1.26437 1.21640 0.99848 0.87471 0.86292 1.22617 0.95281 1.03223 1.02915 1.23123 0.74911 0.90100 0.83024 1.90705 1.43032 1.72607 1.28550 1.86385 1.81954 1.20545 1.36181 1.28365 1.19173 0.78635 1.09455 0.79752 0.65073 0.68139 0.67859 1.26049 1.12919 1.06383 1.09926 1.26037 1.05077 1.19386 1.04908 1.26246 1.04011 1.07641 1.16547 1.20890 0.86222 0.93074 1.03299 1.98401 1.07640 1.98328 1.96115 1.20787 0.93022 0.97444 1.05102 1.20121 0.92745 0.95958 0.97959 1.25018 1.00535 1.01007 0.92565 1.86528 1.35305 1.96817 1.15355 0.85760 0.78100 0.77295 0.82435 1.16929 1.17244 1.16893 1.21152 1.01152 0.90393 1.05816 0.92149 0.91900 0.87570 0.88253 0.90522 0.89755 0.89682 0.87132 0.90091 0.91075 0.90947 0.91035 0.90960 0.90635 0.91072 0.91426 0.91909 0.90417 0.84315 0.85729 0.77293 0.83416 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.30 -0.68 10.28 -34.26 -0.35 -1.04 16 3 C 0.13 0.24 6.70 -39.13 -0.26 -0.02 16 4 C 0.07 0.19 5.56 -39.10 -0.22 -0.03 16 5 O -0.28 -1.16 8.55 -47.44 -0.41 -1.57 16 6 C 0.10 0.22 3.30 -27.88 -0.09 0.12 16 7 C -0.18 -0.03 8.37 37.16 0.31 0.28 16 8 C 0.45 1.51 6.08 36.01 0.22 1.73 16 9 O -0.46 -2.67 12.16 -25.47 -0.31 -2.98 16 10 O -0.33 -0.65 9.91 -39.24 -0.39 -1.04 16 11 C -0.24 -0.06 5.40 101.05 0.55 0.49 16 12 Si 1.00 -0.81 12.12 -169.99 -2.06 -2.87 16 13 C -0.44 0.29 8.65 101.05 0.87 1.17 16 14 C -0.45 0.38 8.65 101.05 0.87 1.26 16 15 C -0.44 -0.89 7.10 101.05 0.72 -0.17 16 16 C -0.01 -0.01 6.24 -39.39 -0.25 -0.26 16 17 Cl -0.03 -0.05 24.90 -51.86 -1.29 -1.34 16 18 C -0.14 -0.01 8.45 -39.54 -0.33 -0.34 16 19 C -0.07 0.05 5.39 -104.62 -0.56 -0.52 16 20 C -0.08 0.16 2.82 36.00 0.10 0.26 16 21 O -0.53 0.69 12.77 -35.23 -0.45 0.25 16 22 Si 0.94 -1.63 25.07 -169.99 -4.26 -5.89 16 23 H -0.25 0.33 7.11 56.52 0.40 0.73 16 24 H -0.25 0.07 7.11 56.52 0.40 0.47 16 25 H -0.25 0.32 7.11 56.52 0.40 0.72 16 26 C -0.17 0.03 8.60 -39.45 -0.34 -0.31 16 27 H 0.06 -0.18 7.65 -51.93 -0.40 -0.58 16 28 H 0.06 -0.15 7.68 -51.93 -0.40 -0.55 16 29 H 0.11 -0.28 8.14 -51.93 -0.42 -0.71 16 30 H 0.10 0.06 7.91 -51.93 -0.41 -0.35 16 31 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 32 H 0.08 -0.02 5.45 -51.93 -0.28 -0.30 16 33 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 34 H 0.11 -0.20 7.96 -51.93 -0.41 -0.62 16 35 H 0.08 0.07 7.52 -51.92 -0.39 -0.32 16 36 H 0.07 -0.08 7.96 -51.93 -0.41 -0.50 16 37 H 0.07 -0.05 7.96 -51.93 -0.41 -0.47 16 38 H 0.07 -0.02 7.96 -51.93 -0.41 -0.44 16 39 H 0.07 -0.04 7.96 -51.93 -0.41 -0.46 16 40 H 0.07 -0.06 7.96 -51.93 -0.41 -0.48 16 41 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 42 H 0.07 0.23 6.28 -51.93 -0.33 -0.10 16 43 H 0.06 0.08 7.96 -51.93 -0.41 -0.33 16 44 H 0.08 0.26 7.43 -51.93 -0.39 -0.12 16 45 H 0.14 -0.16 4.87 -52.49 -0.26 -0.41 16 46 H 0.12 -0.40 7.96 -51.93 -0.41 -0.81 16 47 H 0.38 -1.59 8.70 45.56 0.40 -1.20 16 48 H 0.15 -0.26 6.30 -52.49 -0.33 -0.59 16 LS Contribution 404.05 15.07 6.09 6.09 Total: 0.00 -7.17 404.05 -7.41 -14.58 By element: Atomic # 1 Polarization: -2.26 SS G_CDS: -6.57 Total: -8.82 kcal Atomic # 6 Polarization: 2.04 SS G_CDS: 2.58 Total: 4.62 kcal Atomic # 8 Polarization: -4.47 SS G_CDS: -1.91 Total: -6.38 kcal Atomic # 14 Polarization: -2.43 SS G_CDS: -6.32 Total: -8.75 kcal Atomic # 17 Polarization: -0.05 SS G_CDS: -1.29 Total: -1.34 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -7.17 -7.41 -14.58 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_13428716_4858416.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -176.200 kcal (2) G-P(sol) polarization free energy of solvation -7.165 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -183.366 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.415 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.580 kcal (6) G-S(sol) free energy of system = (1) + (5) -190.781 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds