Wall clock time and date at job start Sat Mar 6 2021 05:13:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35998 * 117.00183 * 2 1 4 4 C 1.39108 * 120.06472 * 180.02562 * 3 2 1 5 5 O 1.36021 * 120.07697 * 359.96869 * 4 3 2 6 6 C 1.42895 * 117.00004 * 269.72724 * 5 4 3 7 7 C 1.52999 * 109.47266 * 270.00053 * 6 5 4 8 8 C 1.50706 * 109.47247 * 150.00062 * 6 5 4 9 9 O 1.20830 * 119.99594 * 5.00189 * 8 6 5 10 10 O 1.34222 * 120.00024 * 184.72473 * 8 6 5 11 11 C 1.45201 * 116.99867 * 180.02562 * 10 8 6 12 12 Si 1.86298 * 109.47445 * 74.99967 * 11 10 8 13 13 C 1.86302 * 109.46950 * 59.99792 * 12 11 10 14 14 C 1.86293 * 109.47351 * 180.02562 * 12 11 10 15 15 C 1.86308 * 109.47033 * 300.00441 * 12 11 10 16 16 C 1.38665 * 119.84178 * 179.69749 * 4 3 2 17 17 Cl 1.73611 * 120.00541 * 180.24878 * 16 4 3 18 18 C 1.38327 * 119.98428 * 0.27701 * 16 4 3 19 19 C 1.38258 * 120.13035 * 0.02562 * 18 16 4 20 20 C 1.50699 * 119.92149 * 179.97438 * 19 18 16 21 21 O 1.42896 * 109.47427 * 120.00070 * 20 19 18 22 22 Si 1.86304 * 109.47350 * 359.97438 * 20 19 18 23 23 H 1.48499 * 109.46915 * 60.00044 * 22 20 19 24 24 H 1.48500 * 109.46909 * 180.02562 * 22 20 19 25 25 H 1.48500 * 109.46843 * 300.00058 * 22 20 19 26 26 C 1.38228 * 120.15532 * 359.95823 * 19 18 16 27 27 H 1.08997 * 109.46889 * 300.00660 * 1 2 3 28 28 H 1.09006 * 109.46964 * 60.00043 * 1 2 3 29 29 H 1.08997 * 109.47415 * 180.02562 * 1 2 3 30 30 H 1.09003 * 109.47109 * 30.00540 * 6 5 4 31 31 H 1.08995 * 109.47123 * 300.00298 * 7 6 5 32 32 H 1.09002 * 109.47253 * 60.00492 * 7 6 5 33 33 H 1.08999 * 109.46938 * 179.97438 * 7 6 5 34 34 H 1.08998 * 109.47305 * 195.00168 * 11 10 8 35 35 H 1.09008 * 109.47218 * 315.00059 * 11 10 8 36 36 H 1.09007 * 109.46996 * 60.00323 * 13 12 11 37 37 H 1.08998 * 109.47181 * 179.97438 * 13 12 11 38 38 H 1.08994 * 109.47344 * 300.00520 * 13 12 11 39 39 H 1.08995 * 109.47697 * 59.99999 * 14 12 11 40 40 H 1.09007 * 109.47270 * 180.02562 * 14 12 11 41 41 H 1.09007 * 109.46958 * 299.99900 * 14 12 11 42 42 H 1.08994 * 109.47160 * 59.99541 * 15 12 11 43 43 H 1.08998 * 109.46711 * 179.97438 * 15 12 11 44 44 H 1.09001 * 109.46462 * 299.99519 * 15 12 11 45 45 H 1.08000 * 119.93530 * 180.02562 * 18 16 4 46 46 H 1.08999 * 109.47099 * 239.99942 * 20 19 18 47 47 H 0.96699 * 114.00066 * 300.00112 * 21 20 19 48 48 H 1.07995 * 119.99322 * 180.02562 * 26 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2117 0.0000 4 6 3.4355 1.2861 -0.0005 5 8 4.1792 0.1471 -0.0004 6 6 4.5393 -0.3924 1.2728 7 6 5.8757 0.2037 1.7197 8 6 4.6681 -1.8901 1.1657 9 8 4.5607 -2.4302 0.0901 10 8 4.9075 -2.6234 2.2641 11 6 5.0200 -4.0600 2.0859 12 14 6.6644 -4.4625 1.3083 13 6 8.0380 -3.8646 2.4159 14 6 6.8084 -6.3057 1.0790 15 6 6.7910 -3.6194 -0.3482 16 6 4.0603 2.5240 -0.0069 17 17 5.7936 2.6217 -0.0141 18 6 3.3021 3.6810 -0.0069 19 6 1.9216 3.6061 0.0000 20 6 1.1002 4.8696 0.0006 21 8 0.2702 4.8987 -1.1622 22 14 2.2343 6.3476 -0.0081 23 1 3.0856 6.3112 -1.2243 24 1 1.4249 7.5926 -0.0069 25 1 3.0964 6.3171 1.2007 26 6 1.2930 2.3750 0.0060 27 1 -0.3633 0.5139 0.8899 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3634 -1.0276 0.0005 30 1 3.7689 -0.1453 2.0032 31 1 6.6461 -0.0434 0.9893 32 1 5.7826 1.2869 1.7973 33 1 6.1502 -0.2075 2.6911 34 1 4.9460 -4.5533 3.0551 35 1 4.2163 -4.4099 1.4378 36 1 7.9639 -4.3579 3.3851 37 1 9.0001 -4.1005 1.9612 38 1 7.9535 -2.7862 2.5496 39 1 6.0049 -6.6552 0.4309 40 1 7.7708 -6.5412 0.6245 41 1 6.7342 -6.7993 2.0481 42 1 6.7065 -2.5411 -0.2145 43 1 7.7533 -3.8546 -0.8029 44 1 5.9873 -3.9693 -0.9962 45 1 3.7896 4.6447 -0.0122 46 1 0.4757 4.8965 0.8935 47 1 0.7600 4.8772 -1.9957 48 1 0.2145 2.3196 0.0110 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_13428716_4858416.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 05:13:04 Heat of formation + Delta-G solvation = -184.250022 kcal Electronic energy + Delta-G solvation = -31441.447999 eV Core-core repulsion = 27034.402467 eV Total energy + Delta-G solvation = -4407.045531 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 376.116 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -42.13196 -41.50394 -39.58162 -39.20220 -37.90076 -37.38928 -36.93306 -33.50469 -31.59401 -31.41642 -29.69836 -28.60554 -28.42749 -28.36727 -28.17179 -26.79636 -25.32431 -23.75789 -22.92540 -21.95527 -19.78192 -18.97829 -18.75797 -18.42980 -18.00875 -17.62635 -17.44786 -16.91306 -16.29386 -16.23442 -16.07359 -15.89871 -15.71609 -15.09112 -14.86493 -14.66654 -14.34153 -14.26953 -14.02176 -13.96273 -13.91587 -13.79566 -13.69358 -13.39778 -13.32671 -13.26643 -13.11470 -13.05446 -12.77168 -12.69493 -12.66868 -12.54413 -12.38673 -12.14489 -12.00603 -11.86093 -11.72723 -11.49041 -11.20322 -10.85209 -10.77271 -10.51328 -10.41769 -9.89060 -9.49172 -0.41717 -0.09043 0.76436 1.03447 1.12433 1.18858 1.46839 1.51784 1.55466 1.86852 1.90864 1.92252 2.12056 2.15839 2.55043 2.61826 3.31269 3.55116 3.60225 3.64409 3.73074 3.78552 3.85830 3.96755 4.00481 4.22456 4.25533 4.30798 4.51391 4.57536 4.60830 4.65312 4.66958 4.67572 4.73454 4.76090 4.77695 4.79553 4.80912 4.83060 4.86515 5.03659 5.06532 5.18699 5.24937 5.51786 5.59850 5.62860 5.81840 6.25838 6.64404 6.67576 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 O -0.324 6.324 3 C 0.122 3.878 4 C 0.049 3.951 5 O -0.307 6.307 6 C 0.101 3.899 7 C -0.179 4.179 8 C 0.447 3.553 9 O -0.496 6.496 10 O -0.332 6.332 11 C -0.257 4.257 12 Si 1.055 2.945 13 C -0.450 4.450 14 C -0.450 4.450 15 C -0.457 4.457 16 C -0.015 4.015 17 Cl -0.039 7.039 18 C -0.146 4.146 19 C -0.060 4.060 20 C -0.073 4.073 21 O -0.546 6.546 22 Si 0.966 3.034 23 H -0.252 1.252 24 H -0.269 1.269 25 H -0.250 1.250 26 C -0.159 4.159 27 H 0.077 0.923 28 H 0.071 0.929 29 H 0.113 0.887 30 H 0.111 0.889 31 H 0.067 0.933 32 H 0.088 0.912 33 H 0.102 0.898 34 H 0.137 0.863 35 H 0.072 0.928 36 H 0.082 0.918 37 H 0.074 0.926 38 H 0.067 0.933 39 H 0.068 0.932 40 H 0.077 0.923 41 H 0.083 0.917 42 H 0.048 0.952 43 H 0.064 0.936 44 H 0.056 0.944 45 H 0.150 0.850 46 H 0.141 0.859 47 H 0.391 0.609 48 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.033 1.546 4.486 5.162 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.238 6.238 3 C 0.075 3.925 4 C 0.004 3.996 5 O -0.223 6.223 6 C 0.044 3.956 7 C -0.236 4.236 8 C 0.289 3.711 9 O -0.383 6.383 10 O -0.248 6.248 11 C -0.374 4.374 12 Si 1.247 2.753 13 C -0.558 4.558 14 C -0.559 4.559 15 C -0.562 4.562 16 C -0.042 4.042 17 Cl -0.010 7.010 18 C -0.164 4.164 19 C -0.061 4.061 20 C -0.184 4.184 21 O -0.353 6.353 22 Si 0.790 3.210 23 H -0.176 1.176 24 H -0.194 1.194 25 H -0.174 1.174 26 C -0.178 4.178 27 H 0.095 0.905 28 H 0.089 0.911 29 H 0.131 0.869 30 H 0.129 0.871 31 H 0.086 0.914 32 H 0.107 0.893 33 H 0.121 0.879 34 H 0.155 0.845 35 H 0.090 0.910 36 H 0.101 0.899 37 H 0.093 0.907 38 H 0.086 0.914 39 H 0.087 0.913 40 H 0.096 0.904 41 H 0.102 0.898 42 H 0.068 0.932 43 H 0.084 0.916 44 H 0.076 0.924 45 H 0.167 0.833 46 H 0.159 0.841 47 H 0.241 0.759 48 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges -1.730 1.803 4.450 5.103 hybrid contribution -0.077 -0.473 -0.724 0.868 sum -1.807 1.329 3.726 4.349 Atomic orbital electron populations 1.23470 0.75670 1.05772 1.03073 1.86203 1.23937 1.25778 1.87840 1.19371 0.90723 0.86157 0.96258 1.17768 0.87081 0.85274 1.09483 1.86209 1.69990 1.38530 1.27592 1.21815 1.01039 0.86653 0.86106 1.22608 0.94054 1.03462 1.03432 1.23471 0.74029 0.90742 0.82823 1.90691 1.44677 1.73275 1.29693 1.86379 1.81506 1.21432 1.35460 1.28728 1.19783 0.77793 1.11093 0.78880 0.64099 0.67439 0.64913 1.26087 1.12892 1.06320 1.10518 1.26063 1.05098 1.19087 1.05616 1.26583 1.03288 1.06998 1.19340 1.20964 0.86110 0.93221 1.03906 1.98392 1.08083 1.98325 1.96192 1.20960 0.93427 0.97373 1.04662 1.20283 0.92500 0.96408 0.96887 1.25009 1.00495 0.99700 0.93152 1.86507 1.35967 1.96699 1.16120 0.85430 0.77408 0.76372 0.81820 1.17582 1.19367 1.17359 1.21324 1.01875 0.89778 1.04801 0.90495 0.91065 0.86886 0.87101 0.91369 0.89300 0.87950 0.84526 0.90960 0.89876 0.90674 0.91369 0.91300 0.90418 0.89753 0.93231 0.91646 0.92439 0.83295 0.84107 0.75944 0.81695 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.04 9.81 113.37 1.11 1.07 16 2 O -0.32 -1.82 10.28 -79.65 -0.82 -2.63 16 3 C 0.12 0.54 6.70 22.56 0.15 0.69 16 4 C 0.05 0.33 5.56 22.58 0.13 0.46 16 5 O -0.31 -3.15 8.55 -67.37 -0.58 -3.73 16 6 C 0.10 0.57 3.30 29.85 0.10 0.67 16 7 C -0.18 -0.25 8.37 71.98 0.60 0.35 16 8 C 0.45 3.80 6.08 71.24 0.43 4.23 16 9 O -0.50 -7.04 12.16 28.37 0.34 -6.70 16 10 O -0.33 -1.50 9.91 -51.34 -0.51 -2.01 16 11 C -0.26 -0.18 5.40 113.37 0.61 0.43 16 12 Si 1.05 -1.44 12.12 68.60 0.83 -0.61 16 13 C -0.45 0.91 8.65 113.37 0.98 1.89 16 14 C -0.45 1.04 8.65 113.37 0.98 2.02 16 15 C -0.46 -2.90 7.10 113.37 0.80 -2.10 16 16 C -0.01 -0.06 6.24 22.39 0.14 0.08 16 17 Cl -0.04 -0.15 24.90 -2.72 -0.07 -0.22 16 18 C -0.15 -0.02 8.45 22.30 0.19 0.17 16 19 C -0.06 0.12 5.39 -19.86 -0.11 0.01 16 20 C -0.07 0.38 2.82 71.24 0.20 0.58 16 21 O -0.55 2.08 12.77 -148.98 -1.90 0.18 16 22 Si 0.97 -3.77 25.07 68.60 1.72 -2.05 16 23 H -0.25 0.75 7.11 99.48 0.71 1.46 16 24 H -0.27 0.13 7.11 99.48 0.71 0.83 16 25 H -0.25 0.78 7.11 99.48 0.71 1.49 16 26 C -0.16 0.13 8.60 22.35 0.19 0.33 16 27 H 0.08 -0.52 7.65 -2.39 -0.02 -0.54 16 28 H 0.07 -0.37 7.68 -2.38 -0.02 -0.38 16 29 H 0.11 -0.58 8.14 -2.39 -0.02 -0.59 16 30 H 0.11 0.27 7.91 -2.39 -0.02 0.25 16 31 H 0.07 0.21 8.14 -2.39 -0.02 0.19 16 32 H 0.09 0.04 5.45 -2.39 -0.01 0.03 16 33 H 0.10 -0.26 8.14 -2.39 -0.02 -0.28 16 34 H 0.14 -0.67 7.96 -2.39 -0.02 -0.69 16 35 H 0.07 0.20 7.52 -2.38 -0.02 0.18 16 36 H 0.08 -0.34 7.96 -2.38 -0.02 -0.36 16 37 H 0.07 -0.17 7.96 -2.39 -0.02 -0.19 16 38 H 0.07 -0.07 7.96 -2.39 -0.02 -0.09 16 39 H 0.07 -0.09 7.96 -2.39 -0.02 -0.10 16 40 H 0.08 -0.18 7.96 -2.38 -0.02 -0.20 16 41 H 0.08 -0.39 7.96 -2.38 -0.02 -0.40 16 42 H 0.05 0.48 6.28 -2.39 -0.02 0.47 16 43 H 0.06 0.30 7.96 -2.39 -0.02 0.28 16 44 H 0.06 0.57 7.43 -2.39 -0.02 0.55 16 45 H 0.15 -0.37 4.87 -2.91 -0.01 -0.39 16 46 H 0.14 -1.16 7.96 -2.39 -0.02 -1.18 16 47 H 0.39 -3.64 8.70 -74.06 -0.64 -4.29 16 48 H 0.17 -0.79 6.30 -2.91 -0.02 -0.81 16 Total: 0.00 -18.26 404.05 6.63 -11.62 By element: Atomic # 1 Polarization: -5.84 SS G_CDS: 1.10 Total: -4.74 kcal Atomic # 6 Polarization: 4.36 SS G_CDS: 6.52 Total: 10.88 kcal Atomic # 8 Polarization: -11.43 SS G_CDS: -3.46 Total: -14.89 kcal Atomic # 14 Polarization: -5.21 SS G_CDS: 2.55 Total: -2.66 kcal Atomic # 17 Polarization: -0.15 SS G_CDS: -0.07 Total: -0.22 kcal Total: -18.26 6.63 -11.62 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_13428716_4858416.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -172.626 kcal (2) G-P(sol) polarization free energy of solvation -18.259 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -190.885 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 6.635 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -11.624 kcal (6) G-S(sol) free energy of system = (1) + (5) -184.250 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds