Wall clock time and date at job start Sat Mar 6 2021 04:24:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.39611 * 120.07560 * 2 1 4 4 C 1.47733 * 120.14881 * 0.02562 * 3 2 1 5 5 O 1.21475 * 119.99723 * 353.74865 * 4 3 2 6 6 O 1.34711 * 120.00066 * 173.74944 * 4 3 2 7 7 C 1.45196 * 116.99972 * 179.97438 * 6 4 3 8 8 C 1.53000 * 109.46886 * 180.02562 * 7 6 4 9 9 H 1.09000 * 109.47092 * 305.00043 * 8 7 6 10 10 C 1.52993 * 109.47122 * 65.00475 * 8 7 6 11 11 C 1.53000 * 109.47122 * 179.97438 * 10 8 7 12 12 C 1.52999 * 109.47021 * 299.99528 * 11 10 8 13 13 H 1.08996 * 109.47749 * 300.00475 * 12 11 10 14 14 O 1.42897 * 109.47309 * 179.97438 * 12 11 10 15 15 C 1.53006 * 109.46938 * 60.00319 * 12 11 10 16 16 C 1.53000 * 109.47004 * 299.99691 * 15 12 11 17 17 C 1.39644 * 119.70170 * 179.97438 * 3 2 1 18 18 C 1.37922 * 119.84953 * 0.25369 * 17 3 2 19 19 C 1.50693 * 119.92762 * 179.72819 * 18 17 3 20 20 O 1.42906 * 109.47527 * 64.99766 * 19 18 17 21 21 Si 1.86303 * 109.47255 * 185.00052 * 19 18 17 22 22 C 1.38389 * 120.14572 * 359.47099 * 18 17 3 23 23 C 1.37966 * 120.07842 * 179.97438 * 2 1 3 24 24 H 1.09000 * 109.47404 * 83.42174 * 1 2 3 25 25 H 1.08998 * 109.47452 * 203.41872 * 1 2 3 26 26 H 1.09000 * 109.47501 * 323.42165 * 1 2 3 27 27 H 1.08997 * 109.47448 * 300.00461 * 7 6 4 28 28 H 1.09005 * 109.46713 * 60.00159 * 7 6 4 29 29 H 1.09006 * 109.47206 * 299.99481 * 10 8 7 30 30 H 1.09000 * 109.47490 * 59.99811 * 10 8 7 31 31 H 1.09000 * 109.47568 * 180.02562 * 11 10 8 32 32 H 1.09004 * 109.47577 * 59.99511 * 11 10 8 33 33 H 0.96698 * 113.99685 * 60.00389 * 14 12 11 34 34 H 1.08997 * 109.47226 * 180.02562 * 15 12 11 35 35 H 1.09000 * 109.47457 * 59.99788 * 15 12 11 36 36 H 1.09000 * 109.47092 * 300.00320 * 16 15 12 37 37 H 1.08998 * 109.47056 * 179.97438 * 16 15 12 38 38 H 1.08005 * 120.07600 * 179.97438 * 17 3 2 39 39 H 1.09006 * 109.47060 * 304.99781 * 19 18 17 40 40 H 0.96692 * 114.00334 * 179.97438 * 20 19 18 41 41 H 1.48501 * 109.99907 * 178.68159 * 21 19 18 42 42 H 1.48504 * 109.99808 * 299.99633 * 21 19 18 43 43 H 1.08001 * 119.85145 * 180.25918 * 22 18 17 44 44 H 1.08003 * 119.92311 * 0.02562 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2066 1.2081 0.0000 4 6 1.4730 2.4904 0.0006 5 8 0.2636 2.4983 -0.1135 6 8 2.1451 3.6510 0.1276 7 6 1.3595 4.8720 0.1193 8 6 2.2891 6.0775 0.2726 9 1 2.8955 5.9569 1.1703 10 6 3.2027 6.1758 -0.9507 11 6 4.1319 7.3817 -0.7977 12 6 3.2961 8.6580 -0.6815 13 1 2.6896 8.7782 -1.5792 14 8 4.1639 9.7842 -0.5380 15 6 2.3824 8.5597 0.5418 16 6 1.4533 7.3538 0.3888 17 6 3.6030 1.1990 0.0005 18 6 4.2817 -0.0017 -0.0042 19 6 5.7886 -0.0135 -0.0098 20 8 6.2740 0.5499 1.2105 21 14 6.3952 -1.7679 -0.1685 22 6 3.5819 -1.1956 0.0015 23 6 2.1984 -1.1939 0.0005 24 1 -0.3634 0.1177 -1.0209 25 1 -0.3634 -0.9430 0.4084 26 1 -0.3634 0.8252 0.6124 27 1 0.8176 4.9490 -0.8232 28 1 0.6494 4.8527 0.9461 29 1 3.7979 5.2663 -1.0337 30 1 2.5963 6.2964 -1.8483 31 1 4.7825 7.4520 -1.6693 32 1 4.7383 7.2616 0.1001 33 1 4.7728 9.9084 -1.2788 34 1 1.7867 9.4687 0.6244 35 1 2.9888 8.4395 1.4396 36 1 0.8469 7.4740 -0.5089 37 1 0.8027 7.2835 1.2605 38 1 4.1504 2.1301 0.0001 39 1 6.1534 0.5746 -0.8520 40 1 7.2384 0.5740 1.2763 41 1 7.8796 -1.7904 -0.2072 42 1 5.9046 -2.5802 0.9738 43 1 4.1181 -2.1330 0.0020 44 1 1.6584 -2.1292 0.0005 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_13429372_16737258.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 04:24:55 Heat of formation + Delta-G solvation = -154.025934 kcal Electronic energy + Delta-G solvation = -25481.790279 eV Core-core repulsion = 21750.980310 eV Total energy + Delta-G solvation = -3730.809969 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.155 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -41.76768 -40.48783 -39.88404 -38.04046 -37.50680 -36.54283 -34.04657 -32.77920 -31.89644 -31.71405 -29.36929 -26.97292 -25.52492 -24.91759 -23.88180 -22.94958 -22.15579 -21.31200 -20.86367 -18.80930 -18.53758 -18.21876 -17.76393 -17.45142 -17.11743 -16.67813 -16.45471 -15.86867 -15.54323 -15.36339 -15.30052 -14.94076 -14.68676 -14.58637 -14.23367 -14.00776 -13.84343 -13.57550 -13.40613 -13.29113 -13.22672 -13.12794 -12.98975 -12.67399 -12.51760 -12.19232 -12.15126 -11.87357 -11.79376 -11.71902 -11.49660 -11.15973 -11.05046 -10.74926 -10.56955 -10.12457 -9.72350 -5.04815 -0.35714 0.20660 1.18214 1.50412 1.53392 1.62086 1.87444 2.57903 3.12303 3.22776 3.45867 3.56584 3.62446 3.68885 3.74162 3.80986 3.85678 4.01853 4.08293 4.13989 4.21348 4.23667 4.29192 4.30320 4.37177 4.39972 4.44280 4.55505 4.60475 4.72630 4.74380 4.84212 4.85880 4.88524 4.99167 5.01518 5.08781 5.09321 5.09778 5.24077 5.24510 5.29235 5.33201 5.39480 5.59592 5.76492 6.35998 6.68530 6.79878 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.127 4.127 2 C -0.011 4.011 3 C -0.133 4.133 4 C 0.510 3.490 5 O -0.499 6.499 6 O -0.351 6.351 7 C 0.073 3.927 8 C -0.089 4.089 9 H 0.086 0.914 10 C -0.112 4.112 11 C -0.152 4.152 12 C 0.102 3.898 13 H 0.055 0.945 14 O -0.569 6.569 15 C -0.111 4.111 16 C -0.110 4.110 17 C -0.029 4.029 18 C -0.095 4.095 19 C -0.075 4.075 20 O -0.535 6.535 21 Si 0.683 3.317 22 C -0.074 4.074 23 C -0.128 4.128 24 H 0.081 0.919 25 H 0.065 0.935 26 H 0.093 0.907 27 H 0.073 0.927 28 H 0.073 0.927 29 H 0.074 0.926 30 H 0.064 0.936 31 H 0.066 0.934 32 H 0.072 0.928 33 H 0.379 0.621 34 H 0.074 0.926 35 H 0.072 0.928 36 H 0.070 0.930 37 H 0.075 0.925 38 H 0.140 0.860 39 H 0.078 0.922 40 H 0.381 0.619 41 H -0.259 1.259 42 H -0.254 1.254 43 H 0.134 0.866 44 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.866 -1.827 -3.500 4.367 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.183 4.183 2 C -0.011 4.011 3 C -0.134 4.134 4 C 0.355 3.645 5 O -0.388 6.388 6 O -0.267 6.267 7 C -0.001 4.001 8 C -0.108 4.108 9 H 0.104 0.896 10 C -0.149 4.149 11 C -0.189 4.189 12 C 0.044 3.956 13 H 0.073 0.927 14 O -0.375 6.375 15 C -0.149 4.149 16 C -0.148 4.148 17 C -0.047 4.047 18 C -0.096 4.096 19 C -0.184 4.184 20 O -0.342 6.342 21 Si 0.584 3.416 22 C -0.091 4.091 23 C -0.146 4.146 24 H 0.099 0.901 25 H 0.084 0.916 26 H 0.112 0.888 27 H 0.092 0.908 28 H 0.092 0.908 29 H 0.092 0.908 30 H 0.083 0.917 31 H 0.085 0.915 32 H 0.091 0.909 33 H 0.226 0.774 34 H 0.092 0.908 35 H 0.091 0.909 36 H 0.088 0.912 37 H 0.093 0.907 38 H 0.157 0.843 39 H 0.096 0.904 40 H 0.229 0.771 41 H -0.184 1.184 42 H -0.178 1.178 43 H 0.151 0.849 44 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 1.001 -2.300 -2.490 3.535 hybrid contribution 1.026 0.698 0.112 1.246 sum 2.027 -1.602 -2.379 3.512 Atomic orbital electron populations 1.21167 0.89545 1.03611 1.03960 1.20124 0.97103 0.91173 0.92725 1.18966 0.93422 0.90105 1.10877 1.21103 0.85907 0.84379 0.73094 1.90813 1.14861 1.87605 1.45549 1.86521 1.41827 1.14900 1.83493 1.23173 0.93490 0.80491 1.02938 1.21273 0.96833 0.92275 1.00388 0.89581 1.21526 0.97711 0.98367 0.97316 1.22276 0.98670 0.95161 1.02840 1.21851 0.90763 0.84855 0.98164 0.92691 1.86521 1.53389 1.48659 1.48911 1.21441 0.97330 0.98254 0.97835 1.21477 0.97616 0.92637 1.03056 1.21265 0.92280 0.98611 0.92556 1.19181 0.93658 0.93258 1.03457 1.24781 0.93910 1.10390 0.89331 1.86599 1.26636 1.83094 1.37915 0.95081 0.80825 0.76424 0.89277 1.21296 0.94646 0.97376 0.95803 1.20996 0.93589 0.97769 1.02245 0.90081 0.91606 0.88844 0.90849 0.90819 0.90753 0.91691 0.91510 0.90913 0.77406 0.90779 0.90918 0.91158 0.90658 0.84259 0.90369 0.77104 1.18446 1.17834 0.84876 0.84287 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -0.14 8.73 36.00 0.31 0.18 16 2 C -0.01 -0.02 5.91 -104.21 -0.62 -0.63 16 3 C -0.13 -0.32 5.87 -104.98 -0.62 -0.94 16 4 C 0.51 1.68 7.83 34.61 0.27 1.95 16 5 O -0.50 -2.42 13.14 -19.25 -0.25 -2.68 16 6 O -0.35 -0.75 9.03 -40.52 -0.37 -1.11 16 7 C 0.07 0.04 4.85 37.16 0.18 0.22 16 8 C -0.09 0.07 2.44 -90.62 -0.22 -0.15 16 9 H 0.09 -0.02 8.14 -51.93 -0.42 -0.44 16 10 C -0.11 0.10 5.10 -26.73 -0.14 -0.03 16 11 C -0.15 0.14 5.54 -26.73 -0.15 -0.01 16 12 C 0.10 -0.02 3.47 -26.73 -0.09 -0.11 16 13 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 14 O -0.57 -0.61 13.32 -35.23 -0.47 -1.08 16 15 C -0.11 0.02 5.57 -26.73 -0.15 -0.13 16 16 C -0.11 0.15 5.20 -26.73 -0.14 0.01 16 17 C -0.03 -0.05 9.25 -39.17 -0.36 -0.41 16 18 C -0.10 -0.07 5.38 -104.69 -0.56 -0.64 16 19 C -0.07 0.05 2.79 36.00 0.10 0.15 16 20 O -0.53 -0.37 12.81 -35.23 -0.45 -0.82 16 21 Si 0.68 -1.10 29.85 -169.99 -5.07 -6.17 16 22 C -0.07 0.01 8.67 -39.49 -0.34 -0.33 16 23 C -0.13 0.00 9.66 -39.64 -0.38 -0.38 16 24 H 0.08 0.08 8.14 -51.93 -0.42 -0.34 16 25 H 0.07 -0.04 8.04 -51.93 -0.42 -0.46 16 26 H 0.09 0.26 5.86 -51.93 -0.30 -0.05 16 27 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 28 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 29 H 0.07 -0.03 7.82 -51.93 -0.41 -0.44 16 30 H 0.06 -0.07 8.14 -51.93 -0.42 -0.50 16 31 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 32 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 33 H 0.38 -1.05 9.08 45.56 0.41 -0.64 16 34 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 35 H 0.07 0.04 8.14 -51.93 -0.42 -0.39 16 36 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 37 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 38 H 0.14 0.14 7.63 -52.48 -0.40 -0.26 16 39 H 0.08 -0.19 7.96 -51.93 -0.41 -0.60 16 40 H 0.38 -1.24 8.74 45.56 0.40 -0.84 16 41 H -0.26 -0.12 7.11 56.52 0.40 0.28 16 42 H -0.25 -0.35 7.04 56.52 0.40 0.05 16 43 H 0.13 -0.27 4.85 -52.49 -0.25 -0.53 16 44 H 0.14 -0.33 8.06 -52.48 -0.42 -0.75 16 LS Contribution 354.29 15.07 5.34 5.34 Total: 0.00 -7.14 354.29 -10.26 -17.40 By element: Atomic # 1 Polarization: -3.53 SS G_CDS: -6.08 Total: -9.61 kcal Atomic # 6 Polarization: 1.64 SS G_CDS: -2.90 Total: -1.27 kcal Atomic # 8 Polarization: -4.15 SS G_CDS: -1.54 Total: -5.69 kcal Atomic # 14 Polarization: -1.10 SS G_CDS: -5.07 Total: -6.17 kcal Total LS contribution 5.34 Total: 5.34 kcal Total: -7.14 -10.26 -17.40 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_13429372_16737258.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -136.630 kcal (2) G-P(sol) polarization free energy of solvation -7.137 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -143.767 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.258 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.396 kcal (6) G-S(sol) free energy of system = (1) + (5) -154.026 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds