Wall clock time and date at job start Sat Mar 6 2021 04:24:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.39611 * 120.07560 * 2 1 4 4 C 1.47733 * 120.14881 * 0.02562 * 3 2 1 5 5 O 1.21475 * 119.99723 * 353.74865 * 4 3 2 6 6 O 1.34711 * 120.00066 * 173.74944 * 4 3 2 7 7 C 1.45196 * 116.99972 * 179.97438 * 6 4 3 8 8 C 1.53000 * 109.46886 * 180.02562 * 7 6 4 9 9 H 1.09000 * 109.47092 * 305.00043 * 8 7 6 10 10 C 1.52993 * 109.47122 * 65.00475 * 8 7 6 11 11 C 1.53000 * 109.47122 * 179.97438 * 10 8 7 12 12 C 1.52999 * 109.47021 * 299.99528 * 11 10 8 13 13 H 1.08996 * 109.47749 * 300.00475 * 12 11 10 14 14 O 1.42897 * 109.47309 * 179.97438 * 12 11 10 15 15 C 1.53006 * 109.46938 * 60.00319 * 12 11 10 16 16 C 1.53000 * 109.47004 * 299.99691 * 15 12 11 17 17 C 1.39644 * 119.70170 * 179.97438 * 3 2 1 18 18 C 1.37922 * 119.84953 * 0.25369 * 17 3 2 19 19 C 1.50693 * 119.92762 * 179.72819 * 18 17 3 20 20 O 1.42906 * 109.47527 * 64.99766 * 19 18 17 21 21 Si 1.86303 * 109.47255 * 185.00052 * 19 18 17 22 22 C 1.38389 * 120.14572 * 359.47099 * 18 17 3 23 23 C 1.37966 * 120.07842 * 179.97438 * 2 1 3 24 24 H 1.09000 * 109.47404 * 83.42174 * 1 2 3 25 25 H 1.08998 * 109.47452 * 203.41872 * 1 2 3 26 26 H 1.09000 * 109.47501 * 323.42165 * 1 2 3 27 27 H 1.08997 * 109.47448 * 300.00461 * 7 6 4 28 28 H 1.09005 * 109.46713 * 60.00159 * 7 6 4 29 29 H 1.09006 * 109.47206 * 299.99481 * 10 8 7 30 30 H 1.09000 * 109.47490 * 59.99811 * 10 8 7 31 31 H 1.09000 * 109.47568 * 180.02562 * 11 10 8 32 32 H 1.09004 * 109.47577 * 59.99511 * 11 10 8 33 33 H 0.96698 * 113.99685 * 60.00389 * 14 12 11 34 34 H 1.08997 * 109.47226 * 180.02562 * 15 12 11 35 35 H 1.09000 * 109.47457 * 59.99788 * 15 12 11 36 36 H 1.09000 * 109.47092 * 300.00320 * 16 15 12 37 37 H 1.08998 * 109.47056 * 179.97438 * 16 15 12 38 38 H 1.08005 * 120.07600 * 179.97438 * 17 3 2 39 39 H 1.09006 * 109.47060 * 304.99781 * 19 18 17 40 40 H 0.96692 * 114.00334 * 179.97438 * 20 19 18 41 41 H 1.48501 * 109.99907 * 178.68159 * 21 19 18 42 42 H 1.48504 * 109.99808 * 299.99633 * 21 19 18 43 43 H 1.08001 * 119.85145 * 180.25918 * 22 18 17 44 44 H 1.08003 * 119.92311 * 0.02562 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2066 1.2081 0.0000 4 6 1.4730 2.4904 0.0006 5 8 0.2636 2.4983 -0.1135 6 8 2.1451 3.6510 0.1276 7 6 1.3595 4.8720 0.1193 8 6 2.2891 6.0775 0.2726 9 1 2.8955 5.9569 1.1703 10 6 3.2027 6.1758 -0.9507 11 6 4.1319 7.3817 -0.7977 12 6 3.2961 8.6580 -0.6815 13 1 2.6896 8.7782 -1.5792 14 8 4.1639 9.7842 -0.5380 15 6 2.3824 8.5597 0.5418 16 6 1.4533 7.3538 0.3888 17 6 3.6030 1.1990 0.0005 18 6 4.2817 -0.0017 -0.0042 19 6 5.7886 -0.0135 -0.0098 20 8 6.2740 0.5499 1.2105 21 14 6.3952 -1.7679 -0.1685 22 6 3.5819 -1.1956 0.0015 23 6 2.1984 -1.1939 0.0005 24 1 -0.3634 0.1177 -1.0209 25 1 -0.3634 -0.9430 0.4084 26 1 -0.3634 0.8252 0.6124 27 1 0.8176 4.9490 -0.8232 28 1 0.6494 4.8527 0.9461 29 1 3.7979 5.2663 -1.0337 30 1 2.5963 6.2964 -1.8483 31 1 4.7825 7.4520 -1.6693 32 1 4.7383 7.2616 0.1001 33 1 4.7728 9.9084 -1.2788 34 1 1.7867 9.4687 0.6244 35 1 2.9888 8.4395 1.4396 36 1 0.8469 7.4740 -0.5089 37 1 0.8027 7.2835 1.2605 38 1 4.1504 2.1301 0.0001 39 1 6.1534 0.5746 -0.8520 40 1 7.2384 0.5740 1.2763 41 1 7.8796 -1.7904 -0.2072 42 1 5.9046 -2.5802 0.9738 43 1 4.1181 -2.1330 0.0020 44 1 1.6584 -2.1292 0.0005 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_13429372_16737258.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 04:24:54 Heat of formation + Delta-G solvation = -150.918912 kcal Electronic energy + Delta-G solvation = -25481.655549 eV Core-core repulsion = 21750.980310 eV Total energy + Delta-G solvation = -3730.675239 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.155 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -41.91512 -40.50709 -39.91470 -38.09234 -37.58655 -36.59904 -34.08958 -32.83222 -31.85014 -31.73593 -29.38813 -27.01935 -25.55883 -24.94603 -23.84140 -22.99015 -22.18073 -21.38869 -20.84654 -18.91725 -18.53546 -18.22109 -17.87270 -17.60431 -17.13754 -16.68593 -16.45609 -15.90037 -15.52906 -15.36375 -15.34276 -14.97437 -14.68683 -14.58302 -14.27337 -14.01391 -13.91002 -13.62730 -13.41881 -13.32104 -13.24189 -13.14348 -13.02225 -12.70673 -12.53514 -12.18181 -12.15179 -11.91382 -11.80345 -11.70987 -11.56199 -11.21405 -11.12020 -10.73004 -10.51578 -10.17629 -9.75939 -4.92314 -0.44825 0.17338 1.27752 1.37163 1.51067 1.60859 1.95119 2.52855 3.18471 3.31336 3.41773 3.59803 3.64740 3.70752 3.74512 3.79480 3.87469 4.02262 4.10909 4.14480 4.22958 4.27836 4.32410 4.32974 4.36392 4.45099 4.46143 4.54460 4.61530 4.70622 4.75240 4.78239 4.87699 4.92923 5.01747 5.03692 5.05874 5.12364 5.14625 5.17303 5.24158 5.28899 5.30800 5.41243 5.50409 5.73950 6.57559 6.60373 6.85098 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 C -0.024 4.024 3 C -0.151 4.151 4 C 0.507 3.493 5 O -0.521 6.521 6 O -0.353 6.353 7 C 0.071 3.929 8 C -0.082 4.082 9 H 0.079 0.921 10 C -0.109 4.109 11 C -0.145 4.145 12 C 0.100 3.900 13 H 0.063 0.937 14 O -0.590 6.590 15 C -0.112 4.112 16 C -0.105 4.105 17 C -0.037 4.037 18 C -0.104 4.104 19 C -0.087 4.087 20 O -0.559 6.559 21 Si 0.768 3.232 22 C -0.074 4.074 23 C -0.125 4.125 24 H 0.078 0.922 25 H 0.084 0.916 26 H 0.073 0.927 27 H 0.075 0.925 28 H 0.071 0.929 29 H 0.069 0.931 30 H 0.070 0.930 31 H 0.077 0.923 32 H 0.062 0.938 33 H 0.393 0.607 34 H 0.070 0.930 35 H 0.062 0.938 36 H 0.078 0.922 37 H 0.079 0.921 38 H 0.139 0.861 39 H 0.097 0.903 40 H 0.396 0.604 41 H -0.287 1.287 42 H -0.293 1.293 43 H 0.154 0.846 44 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.288 -2.626 -4.201 5.457 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C -0.024 4.024 3 C -0.152 4.152 4 C 0.354 3.646 5 O -0.413 6.413 6 O -0.269 6.269 7 C -0.003 4.003 8 C -0.101 4.101 9 H 0.097 0.903 10 C -0.146 4.146 11 C -0.183 4.183 12 C 0.042 3.958 13 H 0.081 0.919 14 O -0.398 6.398 15 C -0.150 4.150 16 C -0.142 4.142 17 C -0.055 4.055 18 C -0.104 4.104 19 C -0.195 4.195 20 O -0.369 6.369 21 Si 0.672 3.328 22 C -0.092 4.092 23 C -0.143 4.143 24 H 0.097 0.903 25 H 0.103 0.897 26 H 0.091 0.909 27 H 0.093 0.907 28 H 0.090 0.910 29 H 0.087 0.913 30 H 0.089 0.911 31 H 0.096 0.904 32 H 0.080 0.920 33 H 0.243 0.757 34 H 0.089 0.911 35 H 0.081 0.919 36 H 0.096 0.904 37 H 0.098 0.902 38 H 0.156 0.844 39 H 0.115 0.885 40 H 0.246 0.754 41 H -0.214 1.214 42 H -0.220 1.220 43 H 0.171 0.829 44 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges 1.441 -3.071 -3.212 4.672 hybrid contribution 0.949 0.957 0.363 1.395 sum 2.390 -2.115 -2.848 4.277 Atomic orbital electron populations 1.21101 0.89463 1.03761 1.03516 1.20312 0.97375 0.91539 0.93204 1.19089 0.93902 0.90033 1.12138 1.21377 0.85767 0.84934 0.72530 1.90797 1.15697 1.87942 1.46815 1.86525 1.42042 1.15146 1.83224 1.23286 0.93720 0.80307 1.02956 1.21219 0.96630 0.91969 1.00276 0.90260 1.21498 0.97645 0.98147 0.97349 1.22207 0.98532 0.94750 1.02812 1.21911 0.90798 0.84801 0.98301 0.91902 1.86482 1.54025 1.49137 1.50196 1.21451 0.97402 0.98500 0.97636 1.21439 0.97376 0.91728 1.03695 1.21313 0.92022 0.99140 0.93028 1.19447 0.94619 0.93259 1.03111 1.25050 0.93099 1.11787 0.89545 1.86553 1.28244 1.83450 1.38640 0.94148 0.77962 0.73758 0.86894 1.21576 0.94849 0.97875 0.94868 1.21304 0.93794 0.98153 1.01007 0.90330 0.89710 0.90856 0.90665 0.91048 0.91277 0.91099 0.90440 0.91954 0.75705 0.91113 0.91912 0.90359 0.90191 0.84357 0.88513 0.75372 1.21396 1.22005 0.82926 0.81709 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.33 8.73 71.23 0.62 0.29 16 2 C -0.02 -0.08 5.91 -19.60 -0.12 -0.20 16 3 C -0.15 -0.89 5.87 -20.10 -0.12 -1.01 16 4 C 0.51 4.15 7.83 70.33 0.55 4.70 16 5 O -0.52 -6.00 13.14 19.92 0.26 -5.74 16 6 O -0.35 -2.00 9.03 -56.21 -0.51 -2.51 16 7 C 0.07 0.15 4.85 71.98 0.35 0.49 16 8 C -0.08 0.06 2.44 -10.79 -0.03 0.04 16 9 H 0.08 0.06 8.14 -2.39 -0.02 0.04 16 10 C -0.11 0.17 5.10 30.59 0.16 0.33 16 11 C -0.15 0.25 5.54 30.59 0.17 0.42 16 12 C 0.10 -0.03 3.47 30.60 0.11 0.08 16 13 H 0.06 -0.12 8.14 -2.39 -0.02 -0.14 16 14 O -0.59 -1.36 13.32 -148.98 -1.98 -3.34 16 15 C -0.11 -0.02 5.57 30.60 0.17 0.15 16 16 C -0.10 0.24 5.20 30.60 0.16 0.40 16 17 C -0.04 -0.14 9.25 22.53 0.21 0.06 16 18 C -0.10 -0.14 5.38 -19.91 -0.11 -0.25 16 19 C -0.09 0.17 2.79 71.23 0.20 0.37 16 20 O -0.56 -0.70 12.81 -148.98 -1.91 -2.61 16 21 Si 0.77 -3.12 29.85 68.60 2.05 -1.07 16 22 C -0.07 0.08 8.67 22.33 0.19 0.27 16 23 C -0.13 0.11 9.66 22.23 0.21 0.33 16 24 H 0.08 0.22 8.14 -2.39 -0.02 0.20 16 25 H 0.08 -0.14 8.04 -2.39 -0.02 -0.16 16 26 H 0.07 0.52 5.86 -2.39 -0.01 0.51 16 27 H 0.08 0.13 8.14 -2.39 -0.02 0.11 16 28 H 0.07 0.17 8.14 -2.38 -0.02 0.15 16 29 H 0.07 -0.02 7.82 -2.38 -0.02 -0.04 16 30 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 31 H 0.08 -0.30 8.14 -2.39 -0.02 -0.32 16 32 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 33 H 0.39 -2.21 9.08 -74.06 -0.67 -2.89 16 34 H 0.07 0.06 8.14 -2.39 -0.02 0.04 16 35 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 36 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 37 H 0.08 -0.25 8.14 -2.39 -0.02 -0.27 16 38 H 0.14 0.44 7.63 -2.91 -0.02 0.42 16 39 H 0.10 -0.57 7.96 -2.38 -0.02 -0.58 16 40 H 0.40 -2.65 8.74 -74.06 -0.65 -3.30 16 41 H -0.29 -0.13 7.11 99.48 0.71 0.57 16 42 H -0.29 -0.72 7.04 99.48 0.70 -0.02 16 43 H 0.15 -0.86 4.85 -2.91 -0.01 -0.87 16 44 H 0.17 -1.09 8.06 -2.91 -0.02 -1.12 16 Total: 0.00 -17.19 354.29 0.36 -16.83 By element: Atomic # 1 Polarization: -7.75 SS G_CDS: -0.28 Total: -8.03 kcal Atomic # 6 Polarization: 3.74 SS G_CDS: 2.73 Total: 6.47 kcal Atomic # 8 Polarization: -10.07 SS G_CDS: -4.14 Total: -14.20 kcal Atomic # 14 Polarization: -3.12 SS G_CDS: 2.05 Total: -1.07 kcal Total: -17.19 0.36 -16.83 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_13429372_16737258.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -134.090 kcal (2) G-P(sol) polarization free energy of solvation -17.193 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -151.283 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.364 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.829 kcal (6) G-S(sol) free energy of system = (1) + (5) -150.919 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds