Wall clock time and date at job start Sat Mar 6 2021 04:50:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.42897 * 114.00303 * 2 1 4 4 C 1.52998 * 112.90784 * 72.70202 * 3 2 1 5 5 F 1.39904 * 109.47599 * 282.39578 * 4 3 2 6 6 F 1.39904 * 109.47046 * 42.39364 * 4 3 2 7 7 F 1.39899 * 109.47267 * 162.39407 * 4 3 2 8 8 C 1.53777 * 113.61259 * 301.45419 * 3 2 1 9 9 C 1.53780 * 87.17236 * 270.83768 * 8 3 2 10 10 H 1.08999 * 113.61672 * 220.06350 * 9 8 3 11 11 C 1.53003 * 113.61185 * 89.15968 * 9 8 3 12 12 O 1.45208 * 109.46753 * 175.00110 * 11 9 8 13 13 C 1.34706 * 116.99625 * 180.02562 * 12 11 9 14 14 O 1.21478 * 120.00289 * 359.97438 * 13 12 11 15 15 C 1.47723 * 120.00202 * 180.02562 * 13 12 11 16 16 C 1.39610 * 120.15522 * 174.10437 * 15 13 12 17 17 C 1.50700 * 120.07229 * 0.02647 * 16 15 13 18 18 C 1.37962 * 119.84909 * 180.02562 * 16 15 13 19 19 C 1.38344 * 120.15327 * 0.02562 * 18 16 15 20 20 C 1.38395 * 120.29884 * 359.97438 * 19 18 16 21 21 C 1.50700 * 119.92190 * 179.97438 * 20 19 18 22 22 O 1.42903 * 109.47147 * 119.99618 * 21 20 19 23 23 Si 1.86300 * 109.47134 * 359.97438 * 21 20 19 24 24 C 1.37918 * 120.15047 * 359.71350 * 20 19 18 25 25 C 1.53780 * 113.61747 * 203.95420 * 3 2 1 26 26 H 1.08991 * 109.47138 * 57.96427 * 1 2 3 27 27 H 1.09003 * 109.47097 * 177.97006 * 1 2 3 28 28 H 1.09004 * 109.46774 * 297.96618 * 1 2 3 29 29 H 1.08992 * 113.61717 * 25.43058 * 8 3 2 30 30 H 1.09007 * 113.61546 * 156.24716 * 8 3 2 31 31 H 1.08998 * 109.47078 * 294.99959 * 11 9 8 32 32 H 1.08998 * 109.47300 * 55.00002 * 11 9 8 33 33 H 1.09002 * 109.47455 * 83.40806 * 17 16 15 34 34 H 1.09003 * 109.47081 * 203.40857 * 17 16 15 35 35 H 1.08996 * 109.47351 * 323.40484 * 17 16 15 36 36 H 1.07997 * 119.92298 * 180.02562 * 18 16 15 37 37 H 1.07999 * 119.85042 * 180.02562 * 19 18 16 38 38 H 1.08999 * 109.47055 * 240.00035 * 21 20 19 39 39 H 0.96701 * 113.99687 * 179.97438 * 22 21 20 40 40 H 1.48499 * 109.99987 * 60.00533 * 23 21 20 41 41 H 1.48508 * 109.99815 * 181.31726 * 23 21 20 42 42 H 1.08004 * 120.07523 * 180.29390 * 24 20 19 43 43 H 1.09003 * 113.61826 * 203.66386 * 25 3 2 44 44 H 1.09004 * 113.61708 * 334.48418 * 25 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 1.8697 2.0199 1.3456 5 9 0.5672 2.5132 1.4780 6 9 2.1345 1.1184 2.3822 7 9 2.7788 3.0815 1.4071 8 6 1.5891 2.1672 -1.2020 9 6 2.7941 1.5748 -1.9517 10 1 3.3258 2.3011 -2.5665 11 6 2.4731 0.2807 -2.7022 12 8 3.6338 -0.1343 -3.4696 13 6 3.5162 -1.2643 -4.1934 14 8 2.4727 -1.8863 -4.1834 15 6 4.6564 -1.7479 -4.9985 16 6 4.5818 -2.9799 -5.6510 17 6 3.3365 -3.8208 -5.5366 18 6 5.6506 -3.4256 -6.4008 19 6 6.7948 -2.6551 -6.5065 20 6 6.8755 -1.4329 -5.8622 21 6 8.1262 -0.6008 -5.9827 22 8 7.8040 0.6609 -6.5713 23 14 9.3626 -1.4898 -7.0558 24 6 5.8119 -0.9724 -5.1147 25 6 3.4371 1.3444 -0.5721 26 1 -0.3633 0.5451 -0.8711 27 1 -0.3633 -1.0270 -0.0364 28 1 -0.3633 0.4819 0.9077 29 1 0.6270 1.8825 -1.6277 30 1 1.6713 3.2390 -1.0210 31 1 2.2128 -0.4992 -1.9866 32 1 1.6334 0.4503 -3.3762 33 1 2.6003 -3.4810 -6.2651 34 1 3.5839 -4.8646 -5.7299 35 1 2.9245 -3.7252 -4.5321 36 1 5.5940 -4.3782 -6.9064 37 1 7.6285 -3.0086 -7.0951 38 1 8.5532 -0.4414 -4.9926 39 1 8.5633 1.2498 -6.6792 40 1 8.7927 -1.7136 -8.4088 41 1 10.6125 -0.6942 -7.1566 42 1 5.8744 -0.0162 -4.6163 43 1 4.0260 2.1912 -0.2194 44 1 3.9674 0.3958 -0.4880 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_13429372_17321610.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 04:50:03 Heat of formation + Delta-G solvation = -244.565978 kcal Electronic energy + Delta-G solvation = -33393.057016 eV Core-core repulsion = 28249.959009 eV Total energy + Delta-G solvation = -5143.098007 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 361.127 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -51.14614 -48.69815 -48.57965 -41.95037 -41.34980 -40.13899 -38.03826 -37.54072 -36.86654 -34.04034 -32.67702 -30.72361 -29.35410 -28.40789 -27.46487 -26.83697 -25.61773 -24.96053 -23.45764 -22.75858 -21.30735 -20.63390 -19.79463 -19.44771 -19.21727 -18.81559 -18.49321 -17.74534 -17.55594 -17.25790 -17.04643 -16.62847 -16.52916 -16.04984 -15.71846 -15.59932 -15.48268 -15.41741 -15.22640 -15.03006 -14.95665 -14.76391 -14.73964 -14.59979 -14.35804 -14.18770 -14.01795 -13.76417 -13.42570 -13.38375 -13.19638 -13.16642 -12.95229 -12.86775 -12.69261 -12.42667 -12.21165 -12.10923 -11.80489 -11.75550 -11.61627 -11.05632 -10.83656 -10.59901 -10.11944 -9.69439 -5.03862 -0.35519 0.21653 1.19151 1.51729 1.52753 1.54418 1.56496 1.88961 1.99754 2.53332 2.58657 2.63405 2.82540 3.16019 3.21299 3.30281 3.41074 3.55918 3.62614 3.73516 3.82635 3.86445 4.03564 4.12621 4.14424 4.19746 4.24309 4.25536 4.30739 4.35864 4.39038 4.47591 4.55895 4.60726 4.65193 4.69360 4.74237 4.83991 4.85065 4.91754 5.09261 5.24539 5.29912 5.34847 5.59370 5.61521 5.76849 6.36009 6.78990 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.010 3.990 2 O -0.332 6.332 3 C 0.038 3.962 4 C 0.438 3.562 5 F -0.182 7.182 6 F -0.174 7.174 7 F -0.175 7.175 8 C -0.144 4.144 9 C -0.101 4.101 10 H 0.108 0.892 11 C 0.079 3.921 12 O -0.350 6.350 13 C 0.511 3.489 14 O -0.497 6.497 15 C -0.132 4.132 16 C -0.011 4.011 17 C -0.127 4.127 18 C -0.128 4.128 19 C -0.073 4.073 20 C -0.096 4.096 21 C -0.074 4.074 22 O -0.536 6.536 23 Si 0.681 3.319 24 C -0.028 4.028 25 C -0.113 4.113 26 H 0.056 0.944 27 H 0.103 0.897 28 H 0.054 0.946 29 H 0.096 0.904 30 H 0.114 0.886 31 H 0.093 0.907 32 H 0.075 0.925 33 H 0.079 0.921 34 H 0.065 0.935 35 H 0.095 0.905 36 H 0.140 0.860 37 H 0.134 0.866 38 H 0.079 0.921 39 H 0.381 0.619 40 H -0.254 1.254 41 H -0.259 1.259 42 H 0.141 0.859 43 H 0.117 0.883 44 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.610 -0.806 -1.249 3.004 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 O -0.249 6.249 3 C -0.005 4.005 4 C 0.384 3.616 5 F -0.163 7.163 6 F -0.155 7.155 7 F -0.157 7.157 8 C -0.182 4.182 9 C -0.119 4.119 10 H 0.126 0.874 11 C 0.005 3.995 12 O -0.267 6.267 13 C 0.357 3.643 14 O -0.387 6.387 15 C -0.134 4.134 16 C -0.011 4.011 17 C -0.183 4.183 18 C -0.146 4.146 19 C -0.090 4.090 20 C -0.096 4.096 21 C -0.184 4.184 22 O -0.343 6.343 23 Si 0.582 3.418 24 C -0.047 4.047 25 C -0.150 4.150 26 H 0.074 0.926 27 H 0.121 0.879 28 H 0.072 0.928 29 H 0.115 0.885 30 H 0.132 0.868 31 H 0.111 0.889 32 H 0.094 0.906 33 H 0.098 0.902 34 H 0.084 0.916 35 H 0.113 0.887 36 H 0.157 0.843 37 H 0.151 0.849 38 H 0.097 0.903 39 H 0.229 0.771 40 H -0.178 1.178 41 H -0.185 1.185 42 H 0.158 0.842 43 H 0.136 0.864 44 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges 2.254 -1.359 -1.909 3.252 hybrid contribution -0.375 1.659 0.350 1.737 sum 1.879 0.300 -1.560 2.460 Atomic orbital electron populations 1.23151 0.79408 1.04493 1.01490 1.88099 1.21244 1.21824 1.93764 1.24019 1.00660 0.86810 0.89015 1.21148 0.73834 0.77923 0.88723 1.93192 1.37931 1.88594 1.96621 1.93221 1.93572 1.67153 1.61537 1.93177 1.67348 1.58381 1.96746 1.23613 1.00105 1.00854 0.93591 1.22148 0.97354 0.96903 0.95482 0.87384 1.22997 0.85942 0.96293 0.94220 1.86488 1.42316 1.40911 1.57015 1.21075 0.87517 0.78384 0.77344 1.90814 1.29795 1.55442 1.62605 1.18956 0.93938 0.97079 1.03381 1.20118 0.96323 0.92479 0.92214 1.21175 0.94093 0.97842 1.05217 1.20990 0.92478 1.00992 1.00120 1.21243 0.97741 0.93615 0.96436 1.19196 0.95601 0.95052 0.99745 1.24773 1.01075 0.88889 1.03648 1.86587 1.37670 1.26175 1.83869 0.95119 0.76933 0.88332 0.81442 1.21262 0.90404 0.98499 0.94500 1.23308 0.91917 1.05674 0.94065 0.92577 0.87877 0.92766 0.88546 0.86775 0.88913 0.90623 0.90219 0.91561 0.88709 0.84268 0.84868 0.90261 0.77065 1.17827 1.18451 0.84166 0.86449 0.88249 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.48 101.05 1.06 1.05 16 2 O -0.33 -0.24 8.35 -35.23 -0.29 -0.53 16 3 C 0.04 -0.01 0.86 -89.81 -0.08 -0.09 16 4 C 0.44 0.54 2.68 37.16 0.10 0.64 16 5 F -0.18 -0.28 15.57 2.25 0.04 -0.25 16 6 F -0.17 -0.53 17.08 2.25 0.04 -0.49 16 7 F -0.18 -0.20 15.83 2.25 0.04 -0.17 16 8 C -0.14 0.32 6.45 -25.92 -0.17 0.15 16 9 C -0.10 0.17 4.22 -89.72 -0.38 -0.21 16 10 H 0.11 -0.27 8.14 -51.93 -0.42 -0.69 16 11 C 0.08 0.02 5.06 37.16 0.19 0.21 16 12 O -0.35 -0.63 9.49 -40.51 -0.38 -1.02 16 13 C 0.51 1.58 7.83 34.61 0.27 1.85 16 14 O -0.50 -2.31 13.13 -19.25 -0.25 -2.56 16 15 C -0.13 -0.30 5.87 -104.98 -0.62 -0.91 16 16 C -0.01 -0.02 5.91 -104.21 -0.62 -0.63 16 17 C -0.13 -0.12 8.74 36.01 0.31 0.20 16 18 C -0.13 0.03 9.66 -39.64 -0.38 -0.35 16 19 C -0.07 0.03 8.67 -39.48 -0.34 -0.31 16 20 C -0.10 -0.06 5.42 -104.68 -0.57 -0.62 16 21 C -0.07 0.07 2.81 36.01 0.10 0.17 16 22 O -0.54 -0.21 12.74 -35.23 -0.45 -0.66 16 23 Si 0.68 -1.16 29.78 -169.99 -5.06 -6.23 16 24 C -0.03 -0.04 9.17 -39.17 -0.36 -0.40 16 25 C -0.11 0.15 6.89 -25.83 -0.18 -0.03 16 26 H 0.06 -0.14 6.29 -51.93 -0.33 -0.46 16 27 H 0.10 -0.21 8.14 -51.93 -0.42 -0.63 16 28 H 0.05 -0.04 6.73 -51.93 -0.35 -0.39 16 29 H 0.10 -0.28 6.26 -51.93 -0.33 -0.60 16 30 H 0.11 -0.36 8.10 -51.92 -0.42 -0.78 16 31 H 0.09 0.11 6.13 -51.93 -0.32 -0.21 16 32 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 33 H 0.08 0.10 8.14 -51.93 -0.42 -0.33 16 34 H 0.07 -0.06 8.04 -51.93 -0.42 -0.48 16 35 H 0.09 0.23 5.84 -51.93 -0.30 -0.07 16 36 H 0.14 -0.36 8.06 -52.49 -0.42 -0.78 16 37 H 0.13 -0.34 4.86 -52.49 -0.26 -0.59 16 38 H 0.08 -0.20 7.96 -51.93 -0.41 -0.62 16 39 H 0.38 -1.35 8.74 45.56 0.40 -0.95 16 40 H -0.25 -0.35 7.11 56.52 0.40 0.05 16 41 H -0.26 -0.11 7.11 56.52 0.40 0.29 16 42 H 0.14 0.12 7.63 -52.48 -0.40 -0.28 16 43 H 0.12 -0.28 6.98 -51.93 -0.36 -0.64 16 44 H 0.10 -0.07 8.11 -51.93 -0.42 -0.49 16 LS Contribution 369.19 15.07 5.56 5.56 Total: 0.00 -7.08 369.19 -7.65 -14.73 By element: Atomic # 1 Polarization: -3.86 SS G_CDS: -5.23 Total: -9.09 kcal Atomic # 6 Polarization: 2.35 SS G_CDS: -1.65 Total: 0.70 kcal Atomic # 8 Polarization: -3.39 SS G_CDS: -1.38 Total: -4.77 kcal Atomic # 9 Polarization: -1.02 SS G_CDS: 0.11 Total: -0.91 kcal Atomic # 14 Polarization: -1.16 SS G_CDS: -5.06 Total: -6.23 kcal Total LS contribution 5.56 Total: 5.56 kcal Total: -7.08 -7.65 -14.73 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_13429372_17321610.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -229.838 kcal (2) G-P(sol) polarization free energy of solvation -7.081 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -236.919 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.647 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.728 kcal (6) G-S(sol) free energy of system = (1) + (5) -244.566 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds