Wall clock time and date at job start Sat Mar 6 2021 03:47:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86300 * 109.47509 * 2 1 4 4 C 1.50701 * 109.46878 * 119.99874 * 2 1 3 5 5 C 1.32670 * 124.67003 * 64.72604 * 4 2 1 6 6 C 1.44550 * 113.10015 * 179.81855 * 5 4 2 7 7 C 1.46883 * 123.50553 * 180.23816 * 6 5 4 8 8 O 1.21575 * 119.99958 * 180.27229 * 7 6 5 9 9 O 1.34822 * 119.99903 * 0.26619 * 7 6 5 10 10 C 1.45198 * 116.99820 * 180.02562 * 9 7 6 11 11 C 1.53003 * 109.47082 * 180.02562 * 10 9 7 12 12 H 1.09001 * 109.47112 * 179.97438 * 11 10 9 13 13 O 1.42971 * 109.46971 * 300.00432 * 11 10 9 14 14 C 1.43092 * 113.76724 * 178.79583 * 13 11 10 15 15 C 1.53267 * 108.94006 * 302.02451 * 14 13 11 16 16 H 1.08995 * 109.57440 * 294.59014 * 15 14 13 17 17 N 1.46497 * 109.57243 * 174.33300 * 15 14 13 18 18 C 1.34527 * 124.46453 * 299.70297 * 17 15 14 19 19 O 1.21446 * 125.70573 * 0.02991 * 18 17 15 20 20 C 1.47816 * 108.58175 * 179.90500 * 18 17 15 21 21 C 1.40941 * 105.87918 * 0.34552 * 20 18 17 22 22 C 1.38570 * 119.81881 * 179.79494 * 21 20 18 23 23 C 1.38611 * 119.72090 * 0.02562 * 22 21 20 24 24 C 1.38223 * 120.45729 * 359.97438 * 23 22 21 25 25 C 1.38569 * 134.29559 * 180.09395 * 20 18 17 26 26 C 1.34530 * 124.46005 * 120.00040 * 17 15 14 27 27 O 1.21442 * 125.70661 * 359.96733 * 26 17 15 28 28 C 1.53264 * 108.84488 * 54.52908 * 15 14 13 29 29 O 1.42974 * 109.46847 * 60.00157 * 11 10 9 30 30 C 1.36320 * 112.98622 * 0.45607 * 6 5 4 31 31 Cl 1.73602 * 124.60971 * 179.75441 * 30 6 5 32 32 S 1.70439 * 110.77967 * 359.75699 * 30 6 5 33 33 H 0.96695 * 113.99582 * 299.99951 * 1 2 3 34 34 H 1.09001 * 109.47395 * 239.99652 * 2 1 3 35 35 H 1.48495 * 109.99824 * 300.00080 * 3 2 1 36 36 H 1.48498 * 109.99663 * 61.31719 * 3 2 1 37 37 H 1.07994 * 123.44620 * 359.97438 * 5 4 2 38 38 H 1.09000 * 109.47109 * 300.00271 * 10 9 7 39 39 H 1.09001 * 109.47053 * 60.00349 * 10 9 7 40 40 H 1.09003 * 109.56189 * 61.86337 * 14 13 11 41 41 H 1.08995 * 109.55928 * 182.18926 * 14 13 11 42 42 H 1.08000 * 120.13935 * 180.02562 * 22 21 20 43 43 H 1.07993 * 119.77204 * 180.02562 * 23 22 21 44 44 H 1.08005 * 119.77288 * 179.97438 * 24 23 22 45 45 H 1.07997 * 120.13953 * 0.25592 * 25 20 18 46 46 H 1.09000 * 109.56013 * 65.31238 * 28 15 14 47 47 H 1.08996 * 109.55537 * 185.63536 * 28 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.7436 -1.9983 1.4879 6 6 2.3359 -2.4191 2.7375 7 6 2.2700 -3.7967 3.2427 8 8 2.7871 -4.0796 4.3060 9 8 1.6360 -4.7475 2.5273 10 6 1.6098 -6.0866 3.0880 11 6 0.8531 -7.0210 2.1417 12 1 0.8338 -8.0263 2.5624 13 8 -0.4857 -6.5479 1.9747 14 6 -1.2710 -7.3430 1.0811 15 6 -0.5785 -7.3863 -0.2856 16 1 -0.5711 -6.3880 -0.7230 17 7 -1.2979 -8.3050 -1.1713 18 6 -1.4769 -9.6155 -0.9258 19 8 -1.0744 -10.2152 0.0506 20 6 -2.2481 -10.2028 -2.0417 21 6 -2.4898 -9.1456 -2.9419 22 6 -3.1977 -9.3827 -4.1093 23 6 -3.6639 -10.6591 -4.3830 24 6 -3.4268 -11.6959 -3.5002 25 6 -2.7197 -11.4738 -2.3288 26 6 -1.8616 -7.9504 -2.3403 27 8 -1.8553 -6.8351 -2.8207 28 6 0.8608 -7.8775 -0.0959 29 8 1.5107 -7.0485 0.8725 30 6 2.9578 -1.4033 3.4006 31 17 3.7619 -1.5707 4.9300 32 16 2.8387 0.0534 2.5239 33 1 -0.3932 0.4417 0.7650 34 1 1.7924 -0.5139 -0.8899 35 1 1.5617 2.4678 -1.2085 36 1 1.5880 2.4585 1.2242 37 1 1.2057 -2.6645 0.8298 38 1 2.6305 -6.4474 3.2149 39 1 1.1089 -6.0655 4.0558 40 1 -1.3616 -8.3547 1.4765 41 1 -2.2617 -6.9012 0.9743 42 1 -3.3855 -8.5765 -4.8029 43 1 -4.2153 -10.8449 -5.2927 44 1 -3.7955 -12.6860 -3.7243 45 1 -2.5371 -12.2877 -1.6429 46 1 0.8510 -8.9095 0.2550 47 1 1.3946 -7.8180 -1.0443 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_13431042_13594054.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 03:47:27 Heat of formation + Delta-G solvation = -158.964460 kcal Electronic energy + Delta-G solvation = -41681.088078 eV Core-core repulsion = 35915.898560 eV Total energy + Delta-G solvation = -5765.189518 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 466.050 amu Computer time = 1.56 seconds Orbital eigenvalues (eV) -43.68476 -41.56138 -40.98463 -39.82586 -39.62139 -39.19882 -38.13737 -37.39752 -37.08530 -36.96681 -36.96556 -34.55275 -32.37552 -31.97261 -31.61860 -29.92791 -27.40783 -27.04109 -26.44778 -26.35037 -25.37622 -23.78362 -23.56960 -22.49224 -22.14741 -21.10744 -20.92053 -19.50620 -19.04902 -19.02821 -18.77978 -18.32685 -17.96183 -17.76050 -17.60710 -17.55951 -17.10065 -16.89480 -16.70206 -16.44788 -16.36633 -16.07356 -16.04674 -15.82047 -15.62166 -15.25302 -15.20970 -15.17682 -14.87259 -14.67346 -14.63348 -14.52469 -14.25576 -14.00656 -13.97574 -13.88809 -13.54577 -13.30423 -13.00344 -12.87889 -12.70965 -12.58605 -12.47322 -12.36749 -12.16380 -12.10975 -11.84590 -11.71032 -11.65887 -11.57250 -11.23944 -10.87479 -10.81313 -10.76814 -10.46176 -10.43158 -9.92924 -9.76525 -5.17136 -1.17436 -0.69991 -0.26996 -0.24931 0.39548 0.63444 0.80007 0.91410 0.99744 1.07185 1.42066 1.66613 1.70072 1.81194 1.99572 2.26973 2.32304 2.37064 2.37564 3.05733 3.14851 3.20862 3.30225 3.35632 3.39920 3.52450 3.67702 3.68302 3.79235 3.85462 3.86025 3.93986 3.97113 4.03482 4.13365 4.15804 4.16885 4.24148 4.33159 4.38894 4.47617 4.49140 4.53584 4.63607 4.69979 4.83084 4.88328 4.98272 4.98898 5.31854 5.33747 5.40834 5.51573 5.81034 5.97163 6.24191 6.41543 6.78825 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.031 4.031 3 Si 0.646 3.354 4 C -0.242 4.242 5 C -0.046 4.046 6 C -0.142 4.142 7 C 0.526 3.474 8 O -0.490 6.490 9 O -0.329 6.329 10 C 0.088 3.912 11 C 0.244 3.756 12 H 0.089 0.911 13 O -0.369 6.369 14 C 0.048 3.952 15 C 0.075 3.925 16 H 0.130 0.870 17 N -0.570 5.570 18 C 0.576 3.424 19 O -0.459 6.459 20 C -0.143 4.143 21 C -0.140 4.140 22 C -0.042 4.042 23 C -0.092 4.092 24 C -0.094 4.094 25 C -0.042 4.042 26 C 0.576 3.424 27 O -0.452 6.452 28 C 0.048 3.952 29 O -0.369 6.369 30 C -0.113 4.113 31 Cl 0.029 6.971 32 S 0.251 5.749 33 H 0.379 0.621 34 H 0.133 0.867 35 H -0.229 1.229 36 H -0.236 1.236 37 H 0.168 0.832 38 H 0.100 0.900 39 H 0.099 0.901 40 H 0.074 0.926 41 H 0.110 0.890 42 H 0.145 0.855 43 H 0.145 0.855 44 H 0.145 0.855 45 H 0.144 0.856 46 H 0.075 0.925 47 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.982 -2.878 -5.077 6.163 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.326 6.326 2 C -0.143 4.143 3 Si 0.544 3.456 4 C -0.359 4.359 5 C -0.074 4.074 6 C -0.159 4.159 7 C 0.369 3.631 8 O -0.379 6.379 9 O -0.246 6.246 10 C 0.013 3.987 11 C 0.149 3.851 12 H 0.106 0.894 13 O -0.289 6.289 14 C -0.029 4.029 15 C -0.027 4.027 16 H 0.148 0.852 17 N -0.316 5.316 18 C 0.365 3.635 19 O -0.330 6.330 20 C -0.146 4.146 21 C -0.144 4.144 22 C -0.061 4.061 23 C -0.110 4.110 24 C -0.112 4.112 25 C -0.060 4.060 26 C 0.365 3.635 27 O -0.322 6.322 28 C -0.030 4.030 29 O -0.288 6.288 30 C -0.259 4.259 31 Cl 0.058 6.942 32 S 0.516 5.484 33 H 0.227 0.773 34 H 0.150 0.850 35 H -0.152 1.152 36 H -0.160 1.160 37 H 0.185 0.815 38 H 0.118 0.882 39 H 0.117 0.883 40 H 0.092 0.908 41 H 0.128 0.872 42 H 0.162 0.838 43 H 0.163 0.837 44 H 0.163 0.837 45 H 0.162 0.838 46 H 0.093 0.907 47 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges -0.988 -0.360 -4.495 4.616 hybrid contribution -1.546 -2.239 0.489 2.765 sum -2.534 -2.600 -4.006 5.406 Atomic orbital electron populations 1.86663 1.16879 1.79842 1.49230 1.24417 0.84037 1.10013 0.95856 0.95293 0.91705 0.75037 0.83587 1.24783 1.09507 0.98689 1.02930 1.21138 0.97261 0.94764 0.94254 1.19318 1.07393 0.91455 0.97742 1.20151 0.75667 0.85050 0.82270 1.90939 1.43237 1.82013 1.21723 1.86666 1.69757 1.18656 1.49483 1.23106 1.01554 0.78430 0.95574 1.23670 0.79835 0.96501 0.85066 0.89419 1.88261 1.22929 1.54062 1.63603 1.23024 0.95385 0.97452 0.87083 1.22661 0.93102 0.95263 0.91692 0.85198 1.46457 1.52150 1.10867 1.22094 1.18459 0.78322 0.80979 0.85711 1.90816 1.47690 1.65050 1.29454 1.20465 1.02518 0.95633 0.96014 1.20472 1.02732 0.93625 0.97523 1.20872 0.93198 0.97849 0.94163 1.21558 0.97767 0.91832 0.99865 1.21557 0.96345 1.00321 0.92934 1.20859 0.93780 0.94742 0.96644 1.18412 0.77116 0.88211 0.79762 1.90859 1.54761 1.22831 1.63717 1.23029 0.90739 0.94872 0.94335 1.88258 1.49828 1.68730 1.22033 1.25642 1.03333 1.00759 0.96195 1.98448 1.75733 1.97317 1.22732 1.83383 1.50153 1.05292 1.09589 0.77333 0.84970 1.15194 1.15956 0.81509 0.88237 0.88280 0.90754 0.87240 0.83752 0.83697 0.83712 0.83802 0.90668 0.87227 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.17 12.88 -35.23 -0.45 -0.62 16 2 C -0.03 0.04 2.94 36.01 0.11 0.14 16 3 Si 0.65 -1.17 30.92 -169.99 -5.26 -6.43 16 4 C -0.24 0.07 5.65 -36.20 -0.20 -0.13 16 5 C -0.05 -0.05 9.98 -38.99 -0.39 -0.44 16 6 C -0.14 -0.40 5.98 -104.60 -0.63 -1.03 16 7 C 0.53 2.26 7.92 34.23 0.27 2.53 16 8 O -0.49 -2.94 14.71 -19.32 -0.28 -3.22 16 9 O -0.33 -1.19 9.75 -47.41 -0.46 -1.65 16 10 C 0.09 0.14 5.56 37.16 0.21 0.34 16 11 C 0.24 0.33 3.59 37.16 0.13 0.46 16 12 H 0.09 -0.06 8.14 -51.93 -0.42 -0.48 16 13 O -0.37 -0.89 10.44 -63.30 -0.66 -1.55 16 14 C 0.05 0.05 6.33 37.30 0.24 0.28 16 15 C 0.07 0.08 3.08 -67.66 -0.21 -0.13 16 16 H 0.13 0.22 7.59 -51.93 -0.39 -0.17 16 17 N -0.57 -0.56 2.53 -110.22 -0.28 -0.84 16 18 C 0.58 0.62 7.35 -12.45 -0.09 0.53 16 19 O -0.46 -1.25 15.16 5.41 0.08 -1.17 16 20 C -0.14 0.05 6.40 -104.83 -0.67 -0.63 16 21 C -0.14 0.02 6.40 -104.84 -0.67 -0.65 16 22 C -0.04 0.09 10.09 -39.32 -0.40 -0.31 16 23 C -0.09 0.36 10.04 -39.45 -0.40 -0.04 16 24 C -0.09 0.37 10.03 -39.45 -0.40 -0.03 16 25 C -0.04 0.10 10.09 -39.32 -0.40 -0.30 16 26 C 0.58 0.97 8.02 -12.45 -0.10 0.87 16 27 O -0.45 -1.92 17.44 5.42 0.09 -1.82 16 28 C 0.05 0.04 6.32 37.29 0.24 0.28 16 29 O -0.37 -0.85 10.44 -63.30 -0.66 -1.51 16 30 C -0.11 -0.25 6.88 30.04 0.21 -0.04 16 31 Cl 0.03 0.09 27.20 -51.86 -1.41 -1.32 16 32 S 0.25 -0.11 20.18 -107.50 -2.17 -2.28 16 33 H 0.38 -0.97 8.70 45.56 0.40 -0.57 16 34 H 0.13 -0.28 7.96 -51.93 -0.41 -0.69 16 35 H -0.23 -0.22 7.11 56.52 0.40 0.18 16 36 H -0.24 0.10 7.11 56.52 0.40 0.50 16 37 H 0.17 0.17 8.06 -52.49 -0.42 -0.26 16 38 H 0.10 0.06 8.14 -51.93 -0.42 -0.36 16 39 H 0.10 0.07 8.14 -51.93 -0.42 -0.36 16 40 H 0.07 0.07 6.71 -51.93 -0.35 -0.28 16 41 H 0.11 0.02 8.14 -51.93 -0.42 -0.40 16 42 H 0.14 -0.49 8.06 -52.49 -0.42 -0.91 16 43 H 0.15 -0.90 8.06 -52.49 -0.42 -1.33 16 44 H 0.15 -0.91 8.06 -52.48 -0.42 -1.33 16 45 H 0.14 -0.53 8.06 -52.49 -0.42 -0.95 16 46 H 0.08 0.07 6.63 -51.93 -0.34 -0.28 16 47 H 0.11 0.00 8.14 -51.93 -0.42 -0.42 16 LS Contribution 437.11 15.07 6.59 6.59 Total: 0.00 -9.68 437.11 -12.55 -22.24 By element: Atomic # 1 Polarization: -3.59 SS G_CDS: -4.53 Total: -8.12 kcal Atomic # 6 Polarization: 4.85 SS G_CDS: -3.15 Total: 1.70 kcal Atomic # 7 Polarization: -0.56 SS G_CDS: -0.28 Total: -0.84 kcal Atomic # 8 Polarization: -9.19 SS G_CDS: -2.35 Total: -11.53 kcal Atomic # 14 Polarization: -1.17 SS G_CDS: -5.26 Total: -6.43 kcal Atomic # 16 Polarization: -0.11 SS G_CDS: -2.17 Total: -2.28 kcal Atomic # 17 Polarization: 0.09 SS G_CDS: -1.41 Total: -1.32 kcal Total LS contribution 6.59 Total: 6.59 kcal Total: -9.68 -12.55 -22.24 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_13431042_13594054.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -136.729 kcal (2) G-P(sol) polarization free energy of solvation -9.682 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -146.410 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.554 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.236 kcal (6) G-S(sol) free energy of system = (1) + (5) -158.964 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.56 seconds