Wall clock time and date at job start Sat Mar 6 2021 04:23:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 C 1.53005 * 109.47088 * 2 1 4 4 C 1.52992 * 109.47406 * 239.99787 * 2 1 3 5 5 O 1.42905 * 109.47104 * 119.99391 * 2 1 3 6 6 C 1.42897 * 113.99677 * 60.00650 * 5 2 1 7 7 H 1.09002 * 112.84808 * 341.18998 * 6 5 2 8 8 C 1.53776 * 113.69399 * 112.46148 * 6 5 2 9 9 C 1.53783 * 87.08144 * 139.98988 * 8 6 5 10 10 H 1.08997 * 113.69300 * 89.13113 * 9 8 6 11 11 C 1.52998 * 113.61440 * 220.02216 * 9 8 6 12 12 O 1.45206 * 109.47315 * 272.49467 * 11 9 8 13 13 C 1.34809 * 117.00177 * 180.02562 * 12 11 9 14 14 O 1.21582 * 120.00492 * 0.02562 * 13 12 11 15 15 C 1.46884 * 120.00096 * 180.02562 * 13 12 11 16 16 C 1.36319 * 123.50882 * 179.97438 * 15 13 12 17 17 Cl 1.73596 * 124.61103 * 0.07381 * 16 15 13 18 18 S 1.70448 * 110.77702 * 180.02562 * 16 15 13 19 19 C 1.75491 * 92.47610 * 0.02562 * 18 16 15 20 20 C 1.50706 * 124.66909 * 180.02562 * 19 18 16 21 21 O 1.42900 * 109.46967 * 244.95649 * 20 19 18 22 22 Si 1.86291 * 109.47261 * 4.95984 * 20 19 18 23 23 C 1.32653 * 110.65595 * 359.97438 * 19 18 16 24 24 C 1.53784 * 113.61096 * 210.00047 * 6 5 2 25 25 H 1.09002 * 109.47143 * 300.00271 * 1 2 3 26 26 H 1.08997 * 109.46581 * 60.00413 * 1 2 3 27 27 H 1.09005 * 109.46602 * 180.02562 * 1 2 3 28 28 H 1.08996 * 109.47403 * 180.02562 * 3 2 1 29 29 H 1.09006 * 109.46524 * 299.99846 * 3 2 1 30 30 H 1.08994 * 109.47207 * 59.99568 * 3 2 1 31 31 H 1.09000 * 109.47134 * 300.00072 * 4 2 1 32 32 H 1.09003 * 109.47762 * 60.00034 * 4 2 1 33 33 H 1.09002 * 109.47401 * 180.02562 * 4 2 1 34 34 H 1.09001 * 113.61167 * 25.44723 * 8 6 5 35 35 H 1.08991 * 113.61639 * 254.53791 * 8 6 5 36 36 H 1.08996 * 109.47429 * 152.50088 * 11 9 8 37 37 H 1.08999 * 109.47606 * 32.49685 * 11 9 8 38 38 H 1.08999 * 109.46538 * 124.95760 * 20 19 18 39 39 H 0.96695 * 113.99449 * 180.02562 * 21 20 19 40 40 H 1.48496 * 109.99927 * 178.67993 * 22 20 19 41 41 H 1.48500 * 110.00090 * 299.99758 * 22 20 19 42 42 H 1.08004 * 123.45209 * 180.26889 * 23 19 18 43 43 H 1.09003 * 113.61800 * 105.38651 * 24 6 5 44 44 H 1.08993 * 113.61438 * 334.47657 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4426 0.0000 4 6 2.0401 -0.7212 -1.2491 5 8 2.0064 -0.6735 1.1669 6 6 1.5848 -2.0354 1.2646 7 1 0.7237 -2.2581 0.6345 8 6 2.7321 -3.0493 1.1208 9 6 2.0543 -3.8563 2.2407 10 1 1.3214 -4.5775 1.8788 11 6 3.0397 -4.4622 3.2420 12 8 3.4791 -5.7608 2.7635 13 6 4.3560 -6.4331 3.5358 14 8 4.7424 -5.9473 4.5812 15 6 4.8446 -7.7526 3.1144 16 6 5.7307 -8.4934 3.8385 17 17 6.4151 -8.0048 5.3572 18 16 6.0742 -9.9653 3.0505 19 6 5.0052 -9.5857 1.7115 20 6 4.7653 -10.4835 0.5251 21 8 5.2571 -9.8508 -0.6581 22 14 5.6543 -12.1006 0.7800 23 6 4.4367 -8.4003 1.8882 24 6 1.4333 -2.5309 2.7125 25 1 -0.3633 0.5139 0.8900 26 1 -0.3632 0.5138 -0.8900 27 1 -0.3633 -1.0277 0.0005 28 1 3.1300 1.4426 -0.0005 29 1 1.6767 1.9563 -0.8901 30 1 1.6767 1.9564 0.8899 31 1 1.6768 -1.7489 -1.2491 32 1 1.6768 -0.2075 -2.1392 33 1 3.1301 -0.7216 -1.2489 34 1 3.7065 -2.6484 1.3999 35 1 2.7438 -3.5618 0.1590 36 1 2.5500 -4.5781 4.2089 37 1 3.9015 -3.8033 3.3479 38 1 3.6963 -10.6691 0.4203 39 1 5.1354 -10.3730 -1.4628 40 1 5.3996 -13.0068 -0.3685 41 1 7.1128 -11.8611 0.9243 42 1 3.7373 -7.9654 1.1895 43 1 0.3966 -2.6251 3.0356 44 1 2.0527 -1.9884 3.4267 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_13431042_14598394.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 04:23:42 Heat of formation + Delta-G solvation = -101.840609 kcal Electronic energy + Delta-G solvation = -27433.375032 eV Core-core repulsion = 23278.642823 eV Total energy + Delta-G solvation = -4154.732209 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 361.088 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -41.68771 -40.82179 -39.22811 -38.53067 -38.13731 -37.32598 -37.14581 -33.91363 -31.98722 -29.95731 -28.35888 -28.34259 -27.02008 -26.65548 -26.24061 -23.58693 -22.18761 -21.11654 -20.86227 -20.51874 -19.48265 -18.59855 -18.20067 -17.77325 -17.60029 -17.54444 -16.61356 -16.39400 -16.02930 -15.86960 -15.64063 -15.16663 -14.86792 -14.62040 -14.55223 -14.47099 -14.20381 -14.02592 -13.92815 -13.48042 -13.32756 -13.21036 -13.08715 -12.99360 -12.79651 -12.67333 -12.65879 -12.55791 -12.41744 -12.30958 -12.15597 -12.07842 -11.87147 -11.76419 -11.39163 -11.33914 -11.17658 -10.59927 -10.36812 -9.99103 -9.79781 -5.05252 -0.83282 -0.32552 0.33786 0.53041 0.87923 1.15707 1.50466 1.61297 1.78896 1.89064 2.72213 3.15020 3.39247 3.50631 3.55026 3.70512 3.74643 3.76552 3.88170 3.92595 3.98135 4.08478 4.11729 4.19730 4.26981 4.40245 4.46898 4.50598 4.62666 4.67151 4.75978 4.76805 4.77876 4.78267 4.84117 4.91021 4.92888 4.93807 5.00294 5.11439 5.14666 5.22109 5.32021 5.33155 5.39673 6.41966 6.55827 6.57050 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C 0.097 3.903 3 C -0.140 4.140 4 C -0.174 4.174 5 O -0.383 6.383 6 C 0.061 3.939 7 H 0.106 0.894 8 C -0.150 4.150 9 C -0.100 4.100 10 H 0.120 0.880 11 C 0.079 3.921 12 O -0.345 6.345 13 C 0.523 3.477 14 O -0.519 6.519 15 C -0.158 4.158 16 C -0.132 4.132 17 Cl 0.013 6.987 18 S 0.295 5.705 19 C -0.196 4.196 20 C -0.037 4.037 21 O -0.551 6.551 22 Si 0.703 3.297 23 C -0.054 4.054 24 C -0.125 4.125 25 H 0.059 0.941 26 H 0.077 0.923 27 H 0.065 0.935 28 H 0.055 0.945 29 H 0.084 0.916 30 H 0.058 0.942 31 H 0.062 0.938 32 H 0.076 0.924 33 H 0.054 0.946 34 H 0.075 0.925 35 H 0.078 0.922 36 H 0.076 0.924 37 H 0.064 0.936 38 H 0.122 0.878 39 H 0.402 0.598 40 H -0.248 1.248 41 H -0.272 1.272 42 H 0.176 0.824 43 H 0.092 0.908 44 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.978 -4.759 -4.818 8.405 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.059 3.941 3 C -0.197 4.197 4 C -0.231 4.231 5 O -0.303 6.303 6 C 0.004 3.996 7 H 0.124 0.876 8 C -0.187 4.187 9 C -0.118 4.118 10 H 0.138 0.862 11 C 0.006 3.994 12 O -0.261 6.261 13 C 0.367 3.633 14 O -0.409 6.409 15 C -0.176 4.176 16 C -0.279 4.279 17 Cl 0.042 6.958 18 S 0.560 5.440 19 C -0.313 4.313 20 C -0.148 4.148 21 O -0.363 6.363 22 Si 0.604 3.396 23 C -0.082 4.082 24 C -0.162 4.162 25 H 0.078 0.922 26 H 0.096 0.904 27 H 0.084 0.916 28 H 0.074 0.926 29 H 0.103 0.897 30 H 0.077 0.923 31 H 0.081 0.919 32 H 0.095 0.905 33 H 0.073 0.927 34 H 0.094 0.906 35 H 0.097 0.903 36 H 0.094 0.906 37 H 0.083 0.917 38 H 0.140 0.860 39 H 0.254 0.746 40 H -0.172 1.172 41 H -0.198 1.198 42 H 0.193 0.807 43 H 0.111 0.889 44 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges -3.030 -5.774 -3.792 7.543 hybrid contribution -0.647 1.897 -1.054 2.265 sum -3.678 -3.877 -4.846 7.214 Atomic orbital electron populations 1.22447 0.94751 1.02911 1.03250 1.21688 0.93845 0.93240 0.85350 1.21801 1.01525 0.93402 1.03011 1.22443 1.01693 1.01091 0.97880 1.88021 1.74323 1.24275 1.43713 1.23666 0.97240 0.81129 0.97572 0.87633 1.23602 0.98920 0.96781 0.99419 1.22328 0.97612 0.95959 0.95896 0.86207 1.23206 0.97816 0.80014 0.98378 1.86541 1.56505 1.33166 1.49914 1.20429 0.76540 0.84876 0.81463 1.90917 1.56626 1.68946 1.24436 1.19438 1.04251 0.95119 0.98792 1.25894 1.02645 1.03307 0.96013 1.98435 1.81874 1.90695 1.24764 1.83259 1.40442 1.10400 1.09861 1.23855 1.04562 1.01237 1.01621 1.24196 1.05580 1.02022 0.83021 1.86564 1.84474 1.47657 1.17572 0.94609 0.79430 0.75349 0.90181 1.21121 1.00055 0.92904 0.94121 1.23222 1.02433 0.93798 0.96790 0.92206 0.90386 0.91596 0.92599 0.89676 0.92317 0.91852 0.90522 0.92659 0.90621 0.90285 0.90604 0.91722 0.86047 0.74617 1.17177 1.19786 0.80666 0.88944 0.89760 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.31 8.38 71.98 0.60 0.91 16 2 C 0.10 0.09 1.11 -10.79 -0.01 0.07 16 3 C -0.14 -0.07 8.84 71.98 0.64 0.57 16 4 C -0.17 0.15 8.38 71.98 0.60 0.75 16 5 O -0.38 -1.79 10.00 -148.98 -1.49 -3.28 16 6 C 0.06 0.02 2.81 31.12 0.09 0.10 16 7 H 0.11 -0.28 5.54 -2.39 -0.01 -0.30 16 8 C -0.15 -0.11 7.47 31.12 0.23 0.13 16 9 C -0.10 0.08 4.02 -10.27 -0.04 0.04 16 10 H 0.12 -0.40 8.14 -2.39 -0.02 -0.42 16 11 C 0.08 0.28 5.31 71.98 0.38 0.67 16 12 O -0.34 -2.11 9.95 -57.21 -0.57 -2.68 16 13 C 0.52 5.02 7.92 70.09 0.56 5.57 16 14 O -0.52 -7.55 14.71 19.57 0.29 -7.26 16 15 C -0.16 -0.99 5.98 -19.85 -0.12 -1.11 16 16 C -0.13 -0.74 6.88 67.37 0.46 -0.27 16 17 Cl 0.01 0.11 27.20 -2.72 -0.07 0.03 16 18 S 0.29 -0.06 20.18 -56.49 -1.14 -1.20 16 19 C -0.20 0.16 5.68 24.52 0.14 0.30 16 20 C -0.04 0.20 2.93 71.24 0.21 0.40 16 21 O -0.55 1.50 12.86 -148.98 -1.92 -0.42 16 22 Si 0.70 -4.01 30.92 68.60 2.12 -1.89 16 23 C -0.05 -0.08 9.98 22.72 0.23 0.15 16 24 C -0.12 0.09 7.47 31.12 0.23 0.32 16 25 H 0.06 -0.02 8.14 -2.39 -0.02 -0.04 16 26 H 0.08 -0.29 8.14 -2.39 -0.02 -0.31 16 27 H 0.07 -0.20 6.24 -2.38 -0.01 -0.22 16 28 H 0.05 0.11 8.14 -2.39 -0.02 0.09 16 29 H 0.08 -0.23 8.14 -2.38 -0.02 -0.25 16 30 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 31 H 0.06 -0.11 7.02 -2.39 -0.02 -0.13 16 32 H 0.08 -0.23 8.14 -2.39 -0.02 -0.25 16 33 H 0.05 0.07 8.14 -2.39 -0.02 0.05 16 34 H 0.08 0.30 7.90 -2.39 -0.02 0.28 16 35 H 0.08 -0.04 8.14 -2.39 -0.02 -0.06 16 36 H 0.08 0.26 8.14 -2.39 -0.02 0.24 16 37 H 0.06 0.36 7.84 -2.39 -0.02 0.35 16 38 H 0.12 -1.30 7.96 -2.39 -0.02 -1.32 16 39 H 0.40 -4.46 8.74 -74.06 -0.65 -5.10 16 40 H -0.25 0.75 7.11 99.48 0.71 1.46 16 41 H -0.27 -0.29 7.11 99.48 0.71 0.41 16 42 H 0.18 -0.22 8.06 -2.91 -0.02 -0.24 16 43 H 0.09 -0.31 8.14 -2.39 -0.02 -0.33 16 44 H 0.08 0.13 8.10 -2.39 -0.02 0.11 16 Total: 0.00 -15.84 390.17 1.83 -14.01 By element: Atomic # 1 Polarization: -6.33 SS G_CDS: 0.41 Total: -5.92 kcal Atomic # 6 Polarization: 4.41 SS G_CDS: 4.20 Total: 8.61 kcal Atomic # 8 Polarization: -9.95 SS G_CDS: -3.69 Total: -13.64 kcal Atomic # 14 Polarization: -4.01 SS G_CDS: 2.12 Total: -1.89 kcal Atomic # 16 Polarization: -0.06 SS G_CDS: -1.14 Total: -1.20 kcal Atomic # 17 Polarization: 0.11 SS G_CDS: -0.07 Total: 0.03 kcal Total: -15.84 1.83 -14.01 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_13431042_14598394.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.829 kcal (2) G-P(sol) polarization free energy of solvation -15.839 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -103.669 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.828 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.011 kcal (6) G-S(sol) free energy of system = (1) + (5) -101.841 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds