Wall clock time and date at job start Sat Mar 6 2021 04:51:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52995 * 109.46735 * 2 1 4 4 C 1.52995 * 109.47008 * 240.00328 * 2 1 3 5 5 O 1.45199 * 109.47212 * 120.00174 * 2 1 3 6 6 C 1.34631 * 117.00273 * 59.99856 * 5 2 1 7 7 O 1.21511 * 120.00121 * 0.02562 * 6 5 2 8 8 N 1.34777 * 120.00040 * 179.97438 * 6 5 2 9 9 C 1.46500 * 119.99996 * 179.97438 * 8 6 5 10 10 H 1.09003 * 112.85173 * 336.20810 * 9 8 6 11 11 C 1.53781 * 113.60916 * 107.50570 * 9 8 6 12 12 C 1.53780 * 87.07971 * 89.11904 * 11 9 8 13 13 H 1.09003 * 113.69091 * 270.87206 * 12 11 9 14 14 C 1.53004 * 113.61546 * 139.97980 * 12 11 9 15 15 O 1.45201 * 109.47189 * 87.50499 * 14 12 11 16 16 C 1.34814 * 117.00060 * 180.02562 * 15 14 12 17 17 O 1.21583 * 120.00463 * 359.97438 * 16 15 14 18 18 C 1.46886 * 119.99917 * 179.97438 * 16 15 14 19 19 C 1.36323 * 123.50453 * 179.70562 * 18 16 15 20 20 Cl 1.73600 * 124.61331 * 359.97438 * 19 18 16 21 21 S 1.70449 * 110.77619 * 179.86097 * 19 18 16 22 22 C 1.75492 * 92.47605 * 0.34440 * 21 19 18 23 23 C 1.50695 * 124.67509 * 179.78701 * 22 21 19 24 24 O 1.42895 * 109.47010 * 245.02733 * 23 22 21 25 25 Si 1.86306 * 109.46839 * 5.01840 * 23 22 21 26 26 C 1.32659 * 110.65056 * 359.80202 * 22 21 19 27 27 C 1.53781 * 113.61621 * 205.00443 * 9 8 6 28 28 H 1.08998 * 109.47058 * 299.99686 * 1 2 3 29 29 H 1.08998 * 109.47705 * 59.99922 * 1 2 3 30 30 H 1.09010 * 109.47265 * 180.02562 * 1 2 3 31 31 H 1.09003 * 109.47210 * 180.02562 * 3 2 1 32 32 H 1.09002 * 109.47563 * 299.99901 * 3 2 1 33 33 H 1.08997 * 109.47570 * 60.00106 * 3 2 1 34 34 H 1.09000 * 109.47093 * 299.99567 * 4 2 1 35 35 H 1.08999 * 109.47814 * 59.99532 * 4 2 1 36 36 H 1.09001 * 109.47043 * 179.97438 * 4 2 1 37 37 H 0.96998 * 120.00265 * 0.02562 * 8 6 5 38 38 H 1.08996 * 113.61971 * 334.57093 * 11 9 8 39 39 H 1.09007 * 113.61509 * 203.66373 * 11 9 8 40 40 H 1.08997 * 109.47133 * 327.50399 * 14 12 11 41 41 H 1.08998 * 109.47093 * 207.50493 * 14 12 11 42 42 H 1.08992 * 109.47794 * 125.02025 * 23 22 21 43 43 H 0.96701 * 114.00456 * 59.98872 * 24 23 22 44 44 H 1.48504 * 109.99568 * 58.68736 * 25 23 22 45 45 H 1.48500 * 109.99650 * 180.02562 * 25 23 22 46 46 H 1.08008 * 123.44173 * 180.02562 * 26 22 21 47 47 H 1.09002 * 113.61524 * 156.34147 * 27 9 8 48 48 H 1.08992 * 113.68980 * 25.44420 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0399 -0.7212 -1.2492 5 8 2.0140 -0.6845 1.1855 6 6 1.6523 -1.9723 1.3383 7 8 0.9516 -2.5097 0.5036 8 7 2.0681 -2.6657 2.4166 9 6 1.6741 -4.0668 2.5832 10 1 0.7593 -4.3161 2.0453 11 6 2.8218 -5.0620 2.3443 12 6 3.1503 -4.9212 3.8400 13 1 3.8471 -4.1126 4.0611 14 6 3.5399 -6.2409 4.5089 15 8 4.9680 -6.4565 4.3588 16 6 5.4766 -7.5836 4.8959 17 8 4.7463 -8.3647 5.4745 18 6 6.9132 -7.8679 4.7822 19 6 7.5035 -8.9810 5.3028 20 17 6.6643 -10.2265 6.1737 21 16 9.1770 -8.9851 4.9795 22 6 9.0944 -7.4507 4.1320 23 6 10.2752 -6.7487 3.5126 24 8 10.5072 -5.5146 4.1946 25 14 11.7854 -7.8303 3.6552 26 6 7.8491 -6.9937 4.1121 27 6 1.6756 -4.5374 4.0472 28 1 -0.3633 0.5138 0.8900 29 1 -0.3634 0.5138 -0.8899 30 1 -0.3634 -1.0277 0.0005 31 1 3.1299 1.4426 -0.0005 32 1 1.6766 1.9564 -0.8900 33 1 1.6766 1.9563 0.8899 34 1 1.6767 -1.7488 -1.2493 35 1 1.6766 -0.2074 -2.1393 36 1 3.1300 -0.7208 -1.2495 37 1 2.6278 -2.2368 3.0828 38 1 3.6028 -4.6785 1.6878 39 1 2.4836 -6.0595 2.0636 40 1 2.9973 -7.0608 4.0384 41 1 3.2882 -6.1994 5.5685 42 1 10.0690 -6.5495 2.4611 43 1 10.6976 -5.6159 5.1373 44 1 11.5455 -9.1295 2.9771 45 1 12.9571 -7.1489 3.0485 46 1 7.5638 -6.0637 3.6428 47 1 1.0240 -5.3914 4.2321 48 1 1.5312 -3.7313 4.7664 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_13431042_15734084.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 04:51:20 Heat of formation + Delta-G solvation = -135.307079 kcal Electronic energy + Delta-G solvation = -32979.822983 eV Core-core repulsion = 28155.767697 eV Total energy + Delta-G solvation = -4824.055287 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 404.098 amu Computer time = 1.48 seconds Orbital eigenvalues (eV) -42.00576 -41.59917 -40.40661 -39.19179 -38.21657 -37.97629 -37.36830 -37.02104 -35.38241 -34.11412 -31.82219 -29.88802 -28.39001 -28.32055 -27.04647 -26.78018 -26.36393 -24.46544 -23.12043 -22.31905 -21.21809 -21.11041 -20.27192 -19.54521 -19.35213 -18.34178 -17.79315 -17.61158 -17.59442 -17.50840 -17.21039 -16.61381 -16.32165 -15.95486 -15.76343 -15.65543 -15.43953 -15.30548 -15.01830 -14.80406 -14.61126 -14.44600 -14.28303 -14.09896 -13.65264 -13.61518 -13.38118 -13.29506 -13.07763 -12.97370 -12.94002 -12.88924 -12.67895 -12.54538 -12.44897 -12.36879 -12.35343 -12.05206 -11.92378 -11.90333 -11.76065 -11.42335 -11.37202 -11.20930 -11.14521 -10.60533 -10.22147 -10.00730 -9.77618 -5.15206 -0.81897 -0.30099 0.35665 0.53404 0.89918 1.10059 1.15589 1.55429 1.64653 1.70301 1.80655 1.90172 3.08074 3.21939 3.35994 3.43478 3.56810 3.66731 3.71941 3.73158 3.75209 3.78481 3.92215 3.92495 4.18842 4.27656 4.36035 4.41063 4.44235 4.48615 4.59080 4.59417 4.70725 4.72358 4.74484 4.77947 4.80655 4.85729 4.86981 4.92109 4.95928 5.00072 5.03827 5.13717 5.25000 5.26147 5.30966 5.45475 5.58925 6.35204 6.58822 6.70830 7.30413 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.128 3.872 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.369 6.369 6 C 0.646 3.354 7 O -0.593 6.593 8 N -0.683 5.683 9 C 0.132 3.868 10 H 0.096 0.904 11 C -0.146 4.146 12 C -0.102 4.102 13 H 0.111 0.889 14 C 0.075 3.925 15 O -0.348 6.348 16 C 0.523 3.477 17 O -0.518 6.518 18 C -0.160 4.160 19 C -0.131 4.131 20 Cl 0.013 6.987 21 S 0.299 5.701 22 C -0.236 4.236 23 C -0.024 4.024 24 O -0.544 6.544 25 Si 0.722 3.278 26 C -0.054 4.054 27 C -0.120 4.120 28 H 0.062 0.938 29 H 0.087 0.913 30 H 0.063 0.937 31 H 0.069 0.931 32 H 0.098 0.902 33 H 0.070 0.930 34 H 0.063 0.937 35 H 0.087 0.913 36 H 0.061 0.939 37 H 0.417 0.583 38 H 0.066 0.934 39 H 0.098 0.902 40 H 0.073 0.927 41 H 0.077 0.923 42 H 0.131 0.869 43 H 0.399 0.601 44 H -0.258 1.258 45 H -0.265 1.265 46 H 0.171 0.829 47 H 0.114 0.886 48 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.722 2.752 2.424 5.979 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.238 4.238 5 O -0.283 6.283 6 C 0.400 3.600 7 O -0.484 6.484 8 N -0.342 5.342 9 C 0.028 3.972 10 H 0.114 0.886 11 C -0.185 4.185 12 C -0.120 4.120 13 H 0.130 0.870 14 C 0.001 3.999 15 O -0.264 6.264 16 C 0.367 3.633 17 O -0.408 6.408 18 C -0.178 4.178 19 C -0.278 4.278 20 Cl 0.042 6.958 21 S 0.565 5.435 22 C -0.353 4.353 23 C -0.137 4.137 24 O -0.353 6.353 25 Si 0.623 3.377 26 C -0.082 4.082 27 C -0.158 4.158 28 H 0.081 0.919 29 H 0.105 0.895 30 H 0.082 0.918 31 H 0.088 0.912 32 H 0.117 0.883 33 H 0.089 0.911 34 H 0.082 0.918 35 H 0.105 0.895 36 H 0.080 0.920 37 H 0.255 0.745 38 H 0.085 0.915 39 H 0.117 0.883 40 H 0.092 0.908 41 H 0.096 0.904 42 H 0.148 0.852 43 H 0.249 0.751 44 H -0.183 1.183 45 H -0.190 1.190 46 H 0.189 0.811 47 H 0.133 0.867 48 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 5.747 1.059 1.532 6.041 hybrid contribution -1.929 0.857 -0.313 2.134 sum 3.818 1.917 1.219 4.442 Atomic orbital electron populations 1.22477 0.93988 1.03709 1.03562 1.22354 0.94496 0.92571 0.81442 1.21894 1.02463 0.90842 1.04290 1.22476 1.01622 1.02252 0.97413 1.86309 1.71504 1.23224 1.47312 1.18310 0.78549 0.80732 0.82436 1.90909 1.42280 1.71043 1.44119 1.44355 1.54920 1.11770 1.23203 1.21804 0.98551 0.78172 0.98680 0.88561 1.23569 0.98343 1.00192 0.96363 1.22664 0.97809 0.96086 0.95427 0.87046 1.23306 0.76104 0.98412 1.02043 1.86556 1.28221 1.40181 1.71465 1.20421 0.88114 0.79338 0.75465 1.90920 1.61129 1.48029 1.40766 1.19457 0.92146 0.97259 1.08937 1.25934 1.02147 0.96077 1.03636 1.98440 1.76703 1.48176 1.72512 1.83156 0.95683 1.17023 1.47614 1.25004 1.00314 1.00867 1.09148 1.24543 0.99611 0.91239 0.98284 1.86526 1.92714 1.27714 1.28300 0.94353 0.76008 0.76894 0.90397 1.21093 0.89848 0.99759 0.97462 1.23329 0.94779 1.02824 0.94877 0.91861 0.89461 0.91789 0.91188 0.88309 0.91102 0.91815 0.89454 0.91977 0.74545 0.91484 0.88328 0.90823 0.90432 0.85204 0.75071 1.18339 1.19036 0.81134 0.86743 0.88556 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.60 8.37 71.98 0.60 0.01 16 2 C 0.13 0.39 1.13 -10.80 -0.01 0.38 16 3 C -0.14 0.28 8.85 71.98 0.64 0.92 16 4 C -0.18 -0.64 8.37 71.98 0.60 -0.04 16 5 O -0.37 -2.03 9.94 -55.40 -0.55 -2.58 16 6 C 0.65 4.33 8.06 129.79 1.05 5.37 16 7 O -0.59 -7.22 11.48 19.81 0.23 -6.99 16 8 N -0.68 -0.10 5.27 -567.61 -2.99 -3.09 16 9 C 0.13 -0.19 4.32 45.52 0.20 0.01 16 10 H 0.10 0.20 7.46 -2.39 -0.02 0.18 16 11 C -0.15 0.28 7.43 31.12 0.23 0.51 16 12 C -0.10 0.45 3.90 -10.27 -0.04 0.41 16 13 H 0.11 -0.60 8.14 -2.39 -0.02 -0.62 16 14 C 0.07 -0.04 5.31 71.98 0.38 0.35 16 15 O -0.35 -1.21 9.95 -57.26 -0.57 -1.78 16 16 C 0.52 3.64 7.92 70.09 0.56 4.19 16 17 O -0.52 -6.06 14.71 19.57 0.29 -5.77 16 18 C -0.16 -0.60 5.98 -19.85 -0.12 -0.71 16 19 C -0.13 -0.38 6.88 67.37 0.46 0.09 16 20 Cl 0.01 0.07 27.20 -2.72 -0.07 0.00 16 21 S 0.30 -1.09 20.19 -56.49 -1.14 -2.23 16 22 C -0.24 0.87 5.65 24.52 0.14 1.01 16 23 C -0.02 0.13 2.94 71.23 0.21 0.34 16 24 O -0.54 2.62 12.88 -148.98 -1.92 0.70 16 25 Si 0.72 -4.43 30.92 68.60 2.12 -2.30 16 26 C -0.05 0.04 9.98 22.71 0.23 0.27 16 27 C -0.12 0.76 7.39 31.12 0.23 0.99 16 28 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 29 H 0.09 -0.01 8.14 -2.39 -0.02 -0.03 16 30 H 0.06 0.55 5.88 -2.38 -0.01 0.54 16 31 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 32 H 0.10 -0.52 8.14 -2.39 -0.02 -0.54 16 33 H 0.07 -0.17 8.14 -2.39 -0.02 -0.18 16 34 H 0.06 0.57 5.88 -2.39 -0.01 0.56 16 35 H 0.09 0.01 8.14 -2.39 -0.02 -0.01 16 36 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 37 H 0.42 -1.82 8.81 -92.71 -0.82 -2.64 16 38 H 0.07 0.04 8.14 -2.39 -0.02 0.03 16 39 H 0.10 -0.22 7.90 -2.38 -0.02 -0.24 16 40 H 0.07 0.00 7.84 -2.39 -0.02 -0.01 16 41 H 0.08 -0.05 8.14 -2.39 -0.02 -0.07 16 42 H 0.13 -0.72 7.96 -2.39 -0.02 -0.74 16 43 H 0.40 -5.06 8.70 -74.06 -0.64 -5.70 16 44 H -0.26 0.53 7.11 99.48 0.71 1.24 16 45 H -0.27 -0.09 7.11 99.48 0.71 0.61 16 46 H 0.17 -0.38 8.06 -2.91 -0.02 -0.40 16 47 H 0.11 -0.90 8.10 -2.39 -0.02 -0.92 16 48 H 0.10 -0.79 8.14 -2.39 -0.02 -0.81 16 Total: 0.00 -19.96 425.37 0.34 -19.63 By element: Atomic # 1 Polarization: -9.24 SS G_CDS: -0.41 Total: -9.64 kcal Atomic # 6 Polarization: 8.73 SS G_CDS: 5.35 Total: 14.08 kcal Atomic # 7 Polarization: -0.10 SS G_CDS: -2.99 Total: -3.09 kcal Atomic # 8 Polarization: -13.91 SS G_CDS: -2.52 Total: -16.43 kcal Atomic # 14 Polarization: -4.43 SS G_CDS: 2.12 Total: -2.30 kcal Atomic # 16 Polarization: -1.09 SS G_CDS: -1.14 Total: -2.23 kcal Atomic # 17 Polarization: 0.07 SS G_CDS: -0.07 Total: 0.00 kcal Total: -19.96 0.34 -19.63 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_13431042_15734084.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -115.682 kcal (2) G-P(sol) polarization free energy of solvation -19.964 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -135.645 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.338 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.625 kcal (6) G-S(sol) free energy of system = (1) + (5) -135.307 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.48 seconds