Wall clock time and date at job start Sat Mar 6 2021 04:51:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.53001 * 109.46675 * 2 1 4 4 C 1.53004 * 109.47048 * 240.00798 * 2 1 3 5 5 O 1.45196 * 109.47456 * 119.99975 * 2 1 3 6 6 C 1.34642 * 116.99574 * 60.00330 * 5 2 1 7 7 O 1.21515 * 119.99998 * 359.97438 * 6 5 2 8 8 N 1.34771 * 119.99795 * 179.97438 * 6 5 2 9 9 C 1.46507 * 119.99796 * 179.97438 * 8 6 5 10 10 H 1.08995 * 112.90857 * 336.25639 * 9 8 6 11 11 C 1.53788 * 113.61007 * 107.50584 * 9 8 6 12 12 C 1.53783 * 87.07743 * 139.98029 * 11 9 8 13 13 H 1.09004 * 113.69053 * 89.12639 * 12 11 9 14 14 C 1.53000 * 113.61151 * 220.01465 * 12 11 9 15 15 O 1.45204 * 109.47099 * 272.49990 * 14 12 11 16 16 C 1.34822 * 116.99702 * 180.02562 * 15 14 12 17 17 O 1.21586 * 120.00208 * 359.97438 * 16 15 14 18 18 C 1.46881 * 119.99689 * 180.02562 * 16 15 14 19 19 C 1.36325 * 123.50229 * 180.02562 * 18 16 15 20 20 Cl 1.73597 * 124.61339 * 359.97438 * 19 18 16 21 21 S 1.70444 * 110.77542 * 179.97438 * 19 18 16 22 22 C 1.75490 * 92.47763 * 0.02562 * 21 19 18 23 23 C 1.50696 * 124.67535 * 179.97438 * 22 21 19 24 24 O 1.42903 * 109.47131 * 120.02082 * 23 22 21 25 25 Si 1.86305 * 109.47185 * 0.02623 * 23 22 21 26 26 C 1.32662 * 110.65495 * 0.26165 * 22 21 19 27 27 C 1.53779 * 87.08335 * 334.56564 * 12 11 9 28 28 H 1.08998 * 109.47095 * 299.99569 * 1 2 3 29 29 H 1.09003 * 109.47348 * 59.99594 * 1 2 3 30 30 H 1.08996 * 109.46954 * 179.97438 * 1 2 3 31 31 H 1.08997 * 109.47021 * 179.97438 * 3 2 1 32 32 H 1.08995 * 109.47422 * 300.00555 * 3 2 1 33 33 H 1.09007 * 109.47277 * 60.00254 * 3 2 1 34 34 H 1.08996 * 109.46806 * 299.99556 * 4 2 1 35 35 H 1.08995 * 109.47208 * 59.99348 * 4 2 1 36 36 H 1.08997 * 109.46703 * 179.97438 * 4 2 1 37 37 H 0.96999 * 120.00104 * 0.02562 * 8 6 5 38 38 H 1.08997 * 113.61589 * 25.43194 * 11 9 8 39 39 H 1.09001 * 113.61199 * 254.52661 * 11 9 8 40 40 H 1.08996 * 109.47036 * 152.50153 * 14 12 11 41 41 H 1.08997 * 109.47002 * 32.50024 * 14 12 11 42 42 H 1.08999 * 109.47358 * 240.02442 * 23 22 21 43 43 H 0.96700 * 114.00311 * 300.00591 * 24 23 22 44 44 H 1.48499 * 109.99670 * 58.67633 * 25 23 22 45 45 H 1.48497 * 110.00233 * 179.97438 * 25 23 22 46 46 H 1.07999 * 123.45036 * 179.73270 * 26 22 21 47 47 H 1.09004 * 113.61494 * 139.98160 * 27 12 11 48 48 H 1.08999 * 113.61547 * 270.88348 * 27 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4426 0.0000 4 6 2.0400 -0.7211 -1.2494 5 8 2.0141 -0.6844 1.1855 6 6 1.6524 -1.9723 1.3382 7 8 0.9510 -2.5094 0.5038 8 7 2.0682 -2.6657 2.4164 9 6 1.6741 -4.0670 2.5828 10 1 0.7600 -4.3174 2.0447 11 6 2.8220 -5.0622 2.3439 12 6 2.2739 -5.8601 3.5388 13 1 1.5236 -6.6013 3.2634 14 6 3.3650 -6.4287 4.4482 15 8 3.7813 -7.7278 3.9508 16 6 4.7432 -8.3692 4.6443 17 8 5.2213 -7.8562 5.6375 18 6 5.2145 -9.6872 4.1992 19 6 6.1815 -10.3982 4.8455 20 17 7.0027 -9.8680 6.2802 21 16 6.4748 -11.8787 4.0534 22 6 5.2726 -11.5439 2.8196 23 6 4.9358 -12.4678 1.6777 24 8 3.5556 -12.8310 1.7500 25 14 5.9880 -14.0013 1.7884 26 6 4.7054 -10.3627 3.0271 27 6 1.6758 -4.5376 4.0469 28 1 -0.3633 0.5138 0.8900 29 1 -0.3634 0.5139 -0.8900 30 1 -0.3633 -1.0276 -0.0005 31 1 3.1299 1.4426 0.0005 32 1 1.6765 1.9564 -0.8899 33 1 1.6766 1.9564 0.8900 34 1 1.6767 -1.7487 -1.2494 35 1 1.6766 -0.2072 -2.1392 36 1 3.1300 -0.7207 -1.2495 37 1 2.6278 -2.2369 3.0826 38 1 3.8109 -4.6383 2.5186 39 1 2.7494 -5.5926 1.3944 40 1 2.9752 -6.5352 5.4605 41 1 4.2195 -5.7522 4.4572 42 1 5.1293 -11.9619 0.7318 43 1 3.3110 -13.2865 2.5672 44 1 5.7570 -14.6829 3.0873 45 1 5.6650 -14.9209 0.6681 46 1 3.9394 -9.9496 2.3876 47 1 0.6779 -4.6446 4.4722 48 1 2.3513 -3.9703 4.6871 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_13431042_15734238.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 04:51:24 Heat of formation + Delta-G solvation = -137.332952 kcal Electronic energy + Delta-G solvation = -32741.788355 eV Core-core repulsion = 27917.645220 eV Total energy + Delta-G solvation = -4824.143135 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 404.098 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -41.94505 -41.59967 -40.33315 -39.23132 -38.25846 -37.99348 -37.37068 -37.08641 -35.41466 -34.23924 -31.83878 -29.86474 -28.38332 -28.31761 -27.05222 -26.77465 -26.36365 -24.60122 -22.53971 -22.26197 -21.45111 -21.13060 -20.48435 -19.56649 -19.11542 -18.46653 -17.96583 -17.65662 -17.57676 -17.48401 -17.18923 -16.59052 -16.43035 -16.24783 -15.84575 -15.65185 -15.42444 -15.26914 -15.06742 -14.63298 -14.54080 -14.39860 -14.22910 -13.96415 -13.60991 -13.50214 -13.37865 -13.18997 -13.04058 -12.99105 -12.90846 -12.88249 -12.67422 -12.55013 -12.51942 -12.46594 -12.37075 -12.21695 -11.94429 -11.86628 -11.79144 -11.41293 -11.38070 -11.28407 -11.11790 -10.80072 -10.17281 -9.99498 -9.77610 -5.06065 -0.81511 -0.29466 0.36195 0.53526 0.90375 1.14177 1.16762 1.51734 1.65203 1.72197 1.80819 1.90255 3.11874 3.20125 3.36019 3.41383 3.48174 3.66899 3.72228 3.72909 3.75535 3.78812 3.90338 3.92954 4.15814 4.24676 4.28472 4.46272 4.49665 4.53383 4.59690 4.61700 4.68560 4.74902 4.75804 4.77515 4.79639 4.84794 4.86050 4.93729 4.94265 5.01310 5.06186 5.16250 5.25561 5.26168 5.31669 5.48561 5.58030 6.38173 6.42191 6.58940 7.32223 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.643 3.357 7 O -0.594 6.594 8 N -0.690 5.690 9 C 0.136 3.864 10 H 0.109 0.891 11 C -0.146 4.146 12 C -0.099 4.099 13 H 0.113 0.887 14 C 0.078 3.922 15 O -0.347 6.347 16 C 0.523 3.477 17 O -0.518 6.518 18 C -0.160 4.160 19 C -0.132 4.132 20 Cl 0.013 6.987 21 S 0.298 5.702 22 C -0.233 4.233 23 C -0.033 4.033 24 O -0.536 6.536 25 Si 0.712 3.288 26 C -0.054 4.054 27 C -0.121 4.121 28 H 0.062 0.938 29 H 0.086 0.914 30 H 0.064 0.936 31 H 0.069 0.931 32 H 0.098 0.902 33 H 0.069 0.931 34 H 0.063 0.937 35 H 0.087 0.913 36 H 0.061 0.939 37 H 0.417 0.583 38 H 0.091 0.909 39 H 0.071 0.929 40 H 0.077 0.923 41 H 0.075 0.925 42 H 0.147 0.853 43 H 0.390 0.610 44 H -0.253 1.253 45 H -0.268 1.268 46 H 0.172 0.828 47 H 0.096 0.904 48 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.047 -0.837 -0.815 2.357 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.090 3.910 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.285 6.285 6 C 0.397 3.603 7 O -0.485 6.485 8 N -0.349 5.349 9 C 0.032 3.968 10 H 0.127 0.873 11 C -0.184 4.184 12 C -0.118 4.118 13 H 0.131 0.869 14 C 0.005 3.995 15 O -0.264 6.264 16 C 0.367 3.633 17 O -0.408 6.408 18 C -0.178 4.178 19 C -0.278 4.278 20 Cl 0.041 6.959 21 S 0.564 5.436 22 C -0.350 4.350 23 C -0.145 4.145 24 O -0.345 6.345 25 Si 0.613 3.387 26 C -0.081 4.081 27 C -0.160 4.160 28 H 0.081 0.919 29 H 0.105 0.895 30 H 0.082 0.918 31 H 0.088 0.912 32 H 0.117 0.883 33 H 0.088 0.912 34 H 0.082 0.918 35 H 0.105 0.895 36 H 0.080 0.920 37 H 0.254 0.746 38 H 0.110 0.890 39 H 0.090 0.910 40 H 0.095 0.905 41 H 0.093 0.907 42 H 0.164 0.836 43 H 0.240 0.760 44 H -0.179 1.179 45 H -0.193 1.193 46 H 0.190 0.810 47 H 0.114 0.886 48 H 0.125 0.875 Dipole moment (debyes) X Y Z Total from point charges 2.864 -2.576 -1.072 3.998 hybrid contribution -1.676 1.543 0.891 2.446 sum 1.188 -1.033 -0.181 1.585 Atomic orbital electron populations 1.22471 0.93995 1.03712 1.03512 1.22354 0.94498 0.92578 0.81532 1.21891 1.02429 0.90906 1.04251 1.22469 1.01591 1.02264 0.97369 1.86315 1.71552 1.23372 1.47261 1.18431 0.78570 0.80693 0.82646 1.90902 1.42311 1.71048 1.44217 1.44777 1.54782 1.12305 1.23071 1.22548 0.98882 0.77083 0.98247 0.87337 1.23615 0.99036 0.96718 0.99070 1.22321 0.97207 0.96454 0.95804 0.86852 1.23245 0.97732 0.80229 0.98333 1.86559 1.51627 1.34204 1.54014 1.20414 0.77195 0.84938 0.80740 1.90919 1.56362 1.67430 1.26112 1.19462 1.02462 0.95401 1.00438 1.25939 1.00972 1.03567 0.97324 1.98439 1.75479 1.89430 1.32504 1.83246 1.35125 1.09700 1.15563 1.24935 1.04587 1.01469 1.04023 1.24603 0.88033 1.04088 0.97768 1.86633 1.23534 1.78894 1.45438 0.94582 0.87012 0.76818 0.80338 1.21099 0.99855 0.92679 0.94516 1.23361 1.03450 0.94127 0.95013 0.91933 0.89478 0.91753 0.91230 0.88308 0.91180 0.91771 0.89467 0.92012 0.74575 0.89048 0.91031 0.90466 0.90672 0.83588 0.75986 1.17860 1.19327 0.81030 0.88580 0.87494 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.62 8.37 71.98 0.60 -0.01 16 2 C 0.13 0.41 1.13 -10.79 -0.01 0.40 16 3 C -0.14 0.24 8.85 71.98 0.64 0.88 16 4 C -0.18 -0.65 8.37 71.98 0.60 -0.04 16 5 O -0.37 -2.13 9.94 -55.51 -0.55 -2.68 16 6 C 0.64 4.36 8.06 129.79 1.05 5.41 16 7 O -0.59 -7.17 11.48 19.79 0.23 -6.94 16 8 N -0.69 -0.13 5.36 -567.59 -3.04 -3.17 16 9 C 0.14 -0.23 4.24 45.52 0.19 -0.03 16 10 H 0.11 0.18 7.47 -2.39 -0.02 0.16 16 11 C -0.15 0.32 7.43 31.12 0.23 0.55 16 12 C -0.10 0.41 4.02 -10.27 -0.04 0.36 16 13 H 0.11 -0.49 8.14 -2.38 -0.02 -0.51 16 14 C 0.08 -0.05 5.31 71.98 0.38 0.33 16 15 O -0.35 -1.19 9.95 -57.34 -0.57 -1.77 16 16 C 0.52 3.56 7.92 70.08 0.56 4.11 16 17 O -0.52 -5.92 14.71 19.56 0.29 -5.63 16 18 C -0.16 -0.58 5.98 -19.85 -0.12 -0.70 16 19 C -0.13 -0.37 6.88 67.37 0.46 0.09 16 20 Cl 0.01 0.07 27.20 -2.72 -0.07 0.00 16 21 S 0.30 -1.02 20.17 -56.49 -1.14 -2.16 16 22 C -0.23 0.86 5.68 24.52 0.14 1.00 16 23 C -0.03 0.18 2.94 71.23 0.21 0.39 16 24 O -0.54 1.33 12.85 -148.98 -1.91 -0.59 16 25 Si 0.71 -4.22 30.90 68.60 2.12 -2.10 16 26 C -0.05 0.05 9.94 22.71 0.23 0.27 16 27 C -0.12 0.77 7.39 31.12 0.23 1.00 16 28 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 29 H 0.09 0.00 8.14 -2.39 -0.02 -0.02 16 30 H 0.06 0.56 5.88 -2.39 -0.01 0.54 16 31 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 32 H 0.10 -0.50 8.14 -2.39 -0.02 -0.52 16 33 H 0.07 -0.14 8.14 -2.38 -0.02 -0.16 16 34 H 0.06 0.57 5.88 -2.39 -0.01 0.56 16 35 H 0.09 0.01 8.14 -2.39 -0.02 -0.01 16 36 H 0.06 0.19 8.14 -2.39 -0.02 0.17 16 37 H 0.42 -1.81 8.84 -92.71 -0.82 -2.63 16 38 H 0.09 -0.23 7.90 -2.39 -0.02 -0.25 16 39 H 0.07 0.00 8.14 -2.39 -0.02 -0.02 16 40 H 0.08 -0.05 8.14 -2.39 -0.02 -0.07 16 41 H 0.07 -0.04 7.84 -2.39 -0.02 -0.06 16 42 H 0.15 -1.17 7.96 -2.39 -0.02 -1.18 16 43 H 0.39 -3.14 8.70 -74.06 -0.64 -3.78 16 44 H -0.25 0.76 7.11 99.48 0.71 1.46 16 45 H -0.27 -0.22 7.11 99.48 0.71 0.48 16 46 H 0.17 -0.39 8.06 -2.91 -0.02 -0.41 16 47 H 0.10 -0.72 8.14 -2.38 -0.02 -0.74 16 48 H 0.11 -0.92 8.08 -2.39 -0.02 -0.94 16 Total: 0.00 -19.26 425.44 0.28 -18.98 By element: Atomic # 1 Polarization: -7.54 SS G_CDS: -0.41 Total: -7.95 kcal Atomic # 6 Polarization: 8.67 SS G_CDS: 5.35 Total: 14.02 kcal Atomic # 7 Polarization: -0.13 SS G_CDS: -3.04 Total: -3.17 kcal Atomic # 8 Polarization: -15.09 SS G_CDS: -2.52 Total: -17.61 kcal Atomic # 14 Polarization: -4.22 SS G_CDS: 2.12 Total: -2.10 kcal Atomic # 16 Polarization: -1.02 SS G_CDS: -1.14 Total: -2.16 kcal Atomic # 17 Polarization: 0.07 SS G_CDS: -0.07 Total: 0.00 kcal Total: -19.26 0.28 -18.98 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_13431042_15734238.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -118.357 kcal (2) G-P(sol) polarization free energy of solvation -19.256 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -137.614 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.281 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.976 kcal (6) G-S(sol) free energy of system = (1) + (5) -137.333 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.32 seconds