Wall clock time and date at job start Sat Mar 6 2021 05:17:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86296 * 109.47351 * 2 1 4 4 C 1.50702 * 109.47218 * 239.99845 * 2 1 3 5 5 C 1.32662 * 124.67227 * 300.00513 * 4 2 1 6 6 C 1.44558 * 113.10214 * 180.02562 * 5 4 2 7 7 C 1.46874 * 123.50535 * 179.97438 * 6 5 4 8 8 O 1.21581 * 120.00061 * 180.02562 * 7 6 5 9 9 O 1.34821 * 120.00248 * 359.97438 * 7 6 5 10 10 C 1.45199 * 117.00620 * 180.02562 * 9 7 6 11 11 C 1.52992 * 109.47733 * 180.02562 * 10 9 7 12 12 H 1.09002 * 109.47103 * 54.99583 * 11 10 9 13 13 C 1.52997 * 109.47482 * 174.99830 * 11 10 9 14 14 C 1.53000 * 109.47060 * 180.02562 * 13 11 10 15 15 C 1.53002 * 109.47233 * 299.99657 * 14 13 11 16 16 H 1.09002 * 109.47075 * 300.00932 * 15 14 13 17 17 O 1.42895 * 109.47308 * 180.02562 * 15 14 13 18 18 C 1.52997 * 109.46817 * 60.00194 * 15 14 13 19 19 C 1.52999 * 109.46961 * 295.00191 * 11 10 9 20 20 C 1.36325 * 112.98495 * 0.22829 * 6 5 4 21 21 Cl 1.73598 * 124.60596 * 179.77084 * 20 6 5 22 22 S 1.70442 * 110.77911 * 359.64836 * 20 6 5 23 23 H 0.96703 * 114.00144 * 59.99878 * 1 2 3 24 24 H 1.09000 * 109.47357 * 120.00265 * 2 1 3 25 25 H 1.48503 * 110.00163 * 298.68304 * 3 2 1 26 26 H 1.48504 * 109.99791 * 59.99845 * 3 2 1 27 27 H 1.07993 * 123.44687 * 0.04917 * 5 4 2 28 28 H 1.09001 * 109.47004 * 59.99724 * 10 9 7 29 29 H 1.09002 * 109.46603 * 300.00107 * 10 9 7 30 30 H 1.09002 * 109.47153 * 59.99783 * 13 11 10 31 31 H 1.09001 * 109.46832 * 299.99974 * 13 11 10 32 32 H 1.08992 * 109.47399 * 59.99823 * 14 13 11 33 33 H 1.09004 * 109.46724 * 180.02562 * 14 13 11 34 34 H 0.96696 * 113.99976 * 180.02562 * 17 15 14 35 35 H 1.09002 * 109.47153 * 60.00231 * 18 15 14 36 36 H 1.09001 * 109.47289 * 180.02562 * 18 15 14 37 37 H 1.09000 * 109.47486 * 59.99547 * 19 11 10 38 38 H 1.09002 * 109.46716 * 299.99630 * 19 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 1.6685 -1.9754 -1.5317 6 6 2.2778 -2.4016 -2.7714 7 6 2.1360 -3.7563 -3.3208 8 8 2.6772 -4.0465 -4.3701 9 8 1.4065 -4.6784 -2.6610 10 6 1.3102 -5.9965 -3.2623 11 6 0.4487 -6.8993 -2.3772 12 1 -0.5190 -6.4266 -2.2089 13 6 0.2438 -8.2478 -3.0703 14 6 -0.6182 -9.1503 -2.1854 15 6 0.0828 -9.3682 -0.8430 16 1 1.0504 -9.8411 -1.0109 17 8 -0.7221 -10.2117 -0.0167 18 6 0.2876 -8.0197 -0.1498 19 6 1.1502 -7.1170 -1.0351 20 6 3.0022 -1.4168 -3.3747 21 17 3.8628 -1.6017 -4.8709 22 16 2.9451 0.0214 -2.4619 23 1 -0.3933 0.4417 -0.7650 24 1 1.7923 -0.5139 0.8899 25 1 1.5879 2.4586 -1.2242 26 1 1.5615 2.4678 1.2085 27 1 1.0612 -2.6205 -0.9142 28 1 2.3075 -6.4258 -3.3582 29 1 0.8540 -5.9132 -4.2488 30 1 1.2115 -8.7205 -3.2387 31 1 -0.2559 -8.0926 -4.0265 32 1 -1.5858 -8.6775 -2.0174 33 1 -0.7638 -10.1112 -2.6790 34 1 -0.3386 -10.3926 0.8524 35 1 -0.6800 -7.5468 0.0181 36 1 0.7874 -8.1749 0.8063 37 1 1.2961 -6.1563 -0.5412 38 1 2.1178 -7.5897 -1.2034 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_13431042_16737258.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 05:17:43 Heat of formation + Delta-G solvation = -149.936123 kcal Electronic energy + Delta-G solvation = -23950.150394 eV Core-core repulsion = 20104.407845 eV Total energy + Delta-G solvation = -3845.742549 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.057 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -41.50786 -40.14784 -39.27152 -38.22360 -37.58526 -37.10538 -36.49999 -32.10669 -31.89072 -31.69176 -27.59510 -26.95095 -25.54103 -23.87078 -22.48025 -22.15045 -21.15678 -20.79835 -19.55224 -18.37209 -18.20275 -17.73945 -17.55571 -17.45921 -16.60228 -16.42649 -15.90161 -15.73268 -15.52453 -15.23848 -14.81130 -14.72068 -14.59669 -14.22750 -14.07138 -13.80231 -13.56138 -13.28548 -13.16445 -13.04229 -12.63834 -12.56037 -12.54833 -12.25821 -12.17995 -11.93498 -11.86095 -11.72685 -11.51997 -11.26583 -11.15562 -10.91891 -10.74638 -9.99582 -9.83858 -5.24915 -0.77085 -0.32045 0.32502 0.54630 0.93280 1.00261 1.36856 1.70457 1.74986 1.93195 3.05658 3.12852 3.31614 3.55013 3.58546 3.69087 3.76613 3.84822 4.01837 4.09658 4.21080 4.24997 4.29370 4.31231 4.39881 4.40995 4.44298 4.58802 4.72143 4.73622 4.88219 4.88631 4.99347 5.01823 5.09614 5.09791 5.25278 5.32867 5.43245 6.15173 6.69023 6.74998 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.030 4.030 3 Si 0.646 3.354 4 C -0.242 4.242 5 C -0.050 4.050 6 C -0.144 4.144 7 C 0.525 3.475 8 O -0.488 6.488 9 O -0.347 6.347 10 C 0.073 3.927 11 C -0.089 4.089 12 H 0.086 0.914 13 C -0.110 4.110 14 C -0.111 4.111 15 C 0.102 3.898 16 H 0.055 0.945 17 O -0.569 6.569 18 C -0.152 4.152 19 C -0.112 4.112 20 C -0.113 4.113 21 Cl 0.029 6.971 22 S 0.253 5.747 23 H 0.379 0.621 24 H 0.133 0.867 25 H -0.236 1.236 26 H -0.229 1.229 27 H 0.166 0.834 28 H 0.074 0.926 29 H 0.074 0.926 30 H 0.070 0.930 31 H 0.075 0.925 32 H 0.072 0.928 33 H 0.073 0.927 34 H 0.379 0.621 35 H 0.072 0.928 36 H 0.066 0.934 37 H 0.074 0.926 38 H 0.064 0.936 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.796 2.057 2.851 3.948 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.327 6.327 2 C -0.143 4.143 3 Si 0.544 3.456 4 C -0.359 4.359 5 C -0.078 4.078 6 C -0.162 4.162 7 C 0.367 3.633 8 O -0.377 6.377 9 O -0.264 6.264 10 C 0.000 4.000 11 C -0.107 4.107 12 H 0.104 0.896 13 C -0.148 4.148 14 C -0.148 4.148 15 C 0.044 3.956 16 H 0.073 0.927 17 O -0.375 6.375 18 C -0.189 4.189 19 C -0.149 4.149 20 C -0.260 4.260 21 Cl 0.058 6.942 22 S 0.518 5.482 23 H 0.228 0.772 24 H 0.150 0.850 25 H -0.160 1.160 26 H -0.152 1.152 27 H 0.184 0.816 28 H 0.092 0.908 29 H 0.092 0.908 30 H 0.088 0.912 31 H 0.093 0.907 32 H 0.091 0.909 33 H 0.092 0.908 34 H 0.226 0.774 35 H 0.091 0.909 36 H 0.085 0.915 37 H 0.093 0.907 38 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges 2.130 3.911 2.225 4.978 hybrid contribution -1.044 -1.772 -0.213 2.068 sum 1.085 2.139 2.012 3.131 Atomic orbital electron populations 1.86651 1.16870 1.79835 1.49331 1.24409 0.84036 1.09981 0.95834 0.95334 0.91487 0.75085 0.83655 1.24800 1.08431 0.99260 1.03382 1.21094 0.98076 0.94692 0.93963 1.19353 1.05964 0.92508 0.98327 1.20113 0.76253 0.84619 0.82306 1.90942 1.44458 1.80232 1.22032 1.86531 1.65841 1.22372 1.51700 1.23186 1.01260 0.78834 0.96765 1.21269 0.99656 0.94647 0.95140 0.89568 1.21475 1.00863 0.93803 0.98658 1.21438 0.99345 1.00327 0.93734 1.21850 0.93538 0.89388 0.90868 0.92709 1.86518 1.50131 1.70186 1.30657 1.22285 1.01179 0.96512 0.98974 1.21540 0.98435 1.00268 0.94694 1.25677 1.02323 1.01127 0.96851 1.98452 1.72771 1.97030 1.25910 1.83388 1.46059 1.07459 1.11285 0.77233 0.84959 1.15972 1.15154 0.81615 0.90804 0.90786 0.91154 0.90663 0.90914 0.90787 0.77391 0.90899 0.91498 0.90695 0.91691 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.48 12.85 -35.23 -0.45 0.02 16 2 C -0.03 0.07 2.94 36.01 0.11 0.18 16 3 Si 0.65 -1.74 30.90 -169.99 -5.25 -6.99 16 4 C -0.24 0.36 5.68 -36.20 -0.21 0.15 16 5 C -0.05 0.02 9.94 -38.99 -0.39 -0.37 16 6 C -0.14 -0.24 5.98 -104.60 -0.63 -0.87 16 7 C 0.52 1.66 7.92 34.22 0.27 1.93 16 8 O -0.49 -2.65 14.71 -19.33 -0.28 -2.93 16 9 O -0.35 -0.59 9.49 -40.82 -0.39 -0.98 16 10 C 0.07 0.02 4.85 37.15 0.18 0.20 16 11 C -0.09 0.09 2.43 -90.63 -0.22 -0.13 16 12 H 0.09 -0.05 8.14 -51.93 -0.42 -0.48 16 13 C -0.11 0.16 5.20 -26.73 -0.14 0.02 16 14 C -0.11 0.03 5.57 -26.73 -0.15 -0.12 16 15 C 0.10 -0.03 3.47 -26.73 -0.09 -0.12 16 16 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 17 O -0.57 -0.58 13.32 -35.23 -0.47 -1.05 16 18 C -0.15 0.16 5.55 -26.70 -0.15 0.01 16 19 C -0.11 0.13 5.11 -26.70 -0.14 -0.01 16 20 C -0.11 -0.15 6.88 30.04 0.21 0.06 16 21 Cl 0.03 0.07 27.20 -51.86 -1.41 -1.34 16 22 S 0.25 -0.34 20.17 -107.50 -2.17 -2.51 16 23 H 0.38 -1.39 8.70 45.56 0.40 -1.00 16 24 H 0.13 -0.45 7.96 -51.93 -0.41 -0.86 16 25 H -0.24 0.26 7.11 56.52 0.40 0.66 16 26 H -0.23 -0.03 7.11 56.52 0.40 0.37 16 27 H 0.17 -0.18 8.06 -52.49 -0.42 -0.60 16 28 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 29 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 30 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 31 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 32 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 33 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 34 H 0.38 -1.07 9.08 45.56 0.41 -0.65 16 35 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 36 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 37 H 0.07 -0.05 7.82 -51.93 -0.41 -0.46 16 38 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 LS Contribution 345.55 15.07 5.21 5.21 Total: 0.00 -6.48 345.55 -10.84 -17.31 By element: Atomic # 1 Polarization: -3.40 SS G_CDS: -4.28 Total: -7.68 kcal Atomic # 6 Polarization: 2.28 SS G_CDS: -1.34 Total: 0.93 kcal Atomic # 8 Polarization: -3.34 SS G_CDS: -1.59 Total: -4.94 kcal Atomic # 14 Polarization: -1.74 SS G_CDS: -5.25 Total: -6.99 kcal Atomic # 16 Polarization: -0.34 SS G_CDS: -2.17 Total: -2.51 kcal Atomic # 17 Polarization: 0.07 SS G_CDS: -1.41 Total: -1.34 kcal Total LS contribution 5.21 Total: 5.21 kcal Total: -6.48 -10.84 -17.31 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_13431042_16737258.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -132.622 kcal (2) G-P(sol) polarization free energy of solvation -6.475 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -139.098 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.838 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.314 kcal (6) G-S(sol) free energy of system = (1) + (5) -149.936 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds