Wall clock time and date at job start Sat Mar 6 2021 05:17:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86296 * 109.47351 * 2 1 4 4 C 1.50702 * 109.47218 * 239.99845 * 2 1 3 5 5 C 1.32662 * 124.67227 * 300.00513 * 4 2 1 6 6 C 1.44558 * 113.10214 * 180.02562 * 5 4 2 7 7 C 1.46874 * 123.50535 * 179.97438 * 6 5 4 8 8 O 1.21581 * 120.00061 * 180.02562 * 7 6 5 9 9 O 1.34821 * 120.00248 * 359.97438 * 7 6 5 10 10 C 1.45199 * 117.00620 * 180.02562 * 9 7 6 11 11 C 1.52992 * 109.47733 * 180.02562 * 10 9 7 12 12 H 1.09002 * 109.47103 * 54.99583 * 11 10 9 13 13 C 1.52997 * 109.47482 * 174.99830 * 11 10 9 14 14 C 1.53000 * 109.47060 * 180.02562 * 13 11 10 15 15 C 1.53002 * 109.47233 * 299.99657 * 14 13 11 16 16 H 1.09002 * 109.47075 * 300.00932 * 15 14 13 17 17 O 1.42895 * 109.47308 * 180.02562 * 15 14 13 18 18 C 1.52997 * 109.46817 * 60.00194 * 15 14 13 19 19 C 1.52999 * 109.46961 * 295.00191 * 11 10 9 20 20 C 1.36325 * 112.98495 * 0.22829 * 6 5 4 21 21 Cl 1.73598 * 124.60596 * 179.77084 * 20 6 5 22 22 S 1.70442 * 110.77911 * 359.64836 * 20 6 5 23 23 H 0.96703 * 114.00144 * 59.99878 * 1 2 3 24 24 H 1.09000 * 109.47357 * 120.00265 * 2 1 3 25 25 H 1.48503 * 110.00163 * 298.68304 * 3 2 1 26 26 H 1.48504 * 109.99791 * 59.99845 * 3 2 1 27 27 H 1.07993 * 123.44687 * 0.04917 * 5 4 2 28 28 H 1.09001 * 109.47004 * 59.99724 * 10 9 7 29 29 H 1.09002 * 109.46603 * 300.00107 * 10 9 7 30 30 H 1.09002 * 109.47153 * 59.99783 * 13 11 10 31 31 H 1.09001 * 109.46832 * 299.99974 * 13 11 10 32 32 H 1.08992 * 109.47399 * 59.99823 * 14 13 11 33 33 H 1.09004 * 109.46724 * 180.02562 * 14 13 11 34 34 H 0.96696 * 113.99976 * 180.02562 * 17 15 14 35 35 H 1.09002 * 109.47153 * 60.00231 * 18 15 14 36 36 H 1.09001 * 109.47289 * 180.02562 * 18 15 14 37 37 H 1.09000 * 109.47486 * 59.99547 * 19 11 10 38 38 H 1.09002 * 109.46716 * 299.99630 * 19 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 1.6685 -1.9754 -1.5317 6 6 2.2778 -2.4016 -2.7714 7 6 2.1360 -3.7563 -3.3208 8 8 2.6772 -4.0465 -4.3701 9 8 1.4065 -4.6784 -2.6610 10 6 1.3102 -5.9965 -3.2623 11 6 0.4487 -6.8993 -2.3772 12 1 -0.5190 -6.4266 -2.2089 13 6 0.2438 -8.2478 -3.0703 14 6 -0.6182 -9.1503 -2.1854 15 6 0.0828 -9.3682 -0.8430 16 1 1.0504 -9.8411 -1.0109 17 8 -0.7221 -10.2117 -0.0167 18 6 0.2876 -8.0197 -0.1498 19 6 1.1502 -7.1170 -1.0351 20 6 3.0022 -1.4168 -3.3747 21 17 3.8628 -1.6017 -4.8709 22 16 2.9451 0.0214 -2.4619 23 1 -0.3933 0.4417 -0.7650 24 1 1.7923 -0.5139 0.8899 25 1 1.5879 2.4586 -1.2242 26 1 1.5615 2.4678 1.2085 27 1 1.0612 -2.6205 -0.9142 28 1 2.3075 -6.4258 -3.3582 29 1 0.8540 -5.9132 -4.2488 30 1 1.2115 -8.7205 -3.2387 31 1 -0.2559 -8.0926 -4.0265 32 1 -1.5858 -8.6775 -2.0174 33 1 -0.7638 -10.1112 -2.6790 34 1 -0.3386 -10.3926 0.8524 35 1 -0.6800 -7.5468 0.0181 36 1 0.7874 -8.1749 0.8063 37 1 1.2961 -6.1563 -0.5412 38 1 2.1178 -7.5897 -1.2034 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_13431042_16737258.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 05:17:42 Heat of formation + Delta-G solvation = -146.645648 kcal Electronic energy + Delta-G solvation = -23950.007708 eV Core-core repulsion = 20104.407845 eV Total energy + Delta-G solvation = -3845.599863 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.057 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -41.65510 -40.12384 -39.23679 -38.25600 -37.70454 -37.11072 -36.54773 -32.11042 -31.82489 -31.66679 -27.64149 -26.87660 -25.56359 -23.80646 -22.45560 -22.15651 -21.17743 -20.77897 -19.56759 -18.39771 -18.18950 -17.76552 -17.61968 -17.54808 -16.51831 -16.35056 -15.84926 -15.74948 -15.48949 -15.25781 -14.79459 -14.72020 -14.57882 -14.26284 -14.02125 -13.84774 -13.59952 -13.21900 -13.13543 -12.99675 -12.68229 -12.56962 -12.51976 -12.35767 -12.13587 -11.89968 -11.85184 -11.69504 -11.56859 -11.38759 -11.10155 -10.80468 -10.71098 -9.99964 -9.78157 -5.05787 -0.82190 -0.29996 0.35734 0.52845 0.89948 1.15913 1.51783 1.63489 1.79900 1.90479 3.17434 3.22824 3.44040 3.59998 3.63103 3.71930 3.74757 3.85409 4.04153 4.14548 4.22998 4.29622 4.34574 4.40907 4.47227 4.48125 4.52809 4.59222 4.78335 4.80459 4.93585 4.94930 5.04535 5.07286 5.14583 5.16956 5.24860 5.31937 5.44191 6.41732 6.57491 6.86406 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.033 4.033 3 Si 0.712 3.288 4 C -0.232 4.232 5 C -0.054 4.054 6 C -0.159 4.159 7 C 0.523 3.477 8 O -0.518 6.518 9 O -0.345 6.345 10 C 0.071 3.929 11 C -0.081 4.081 12 H 0.082 0.918 13 C -0.106 4.106 14 C -0.112 4.112 15 C 0.100 3.900 16 H 0.061 0.939 17 O -0.590 6.590 18 C -0.145 4.145 19 C -0.109 4.109 20 C -0.132 4.132 21 Cl 0.012 6.988 22 S 0.298 5.702 23 H 0.390 0.610 24 H 0.148 0.852 25 H -0.254 1.254 26 H -0.268 1.268 27 H 0.173 0.827 28 H 0.073 0.927 29 H 0.071 0.929 30 H 0.076 0.924 31 H 0.079 0.921 32 H 0.063 0.937 33 H 0.069 0.931 34 H 0.393 0.607 35 H 0.063 0.937 36 H 0.076 0.924 37 H 0.071 0.929 38 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.994 2.501 3.690 4.883 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.144 4.144 3 Si 0.613 3.387 4 C -0.349 4.349 5 C -0.081 4.081 6 C -0.177 4.177 7 C 0.366 3.634 8 O -0.409 6.409 9 O -0.262 6.262 10 C -0.002 4.002 11 C -0.100 4.100 12 H 0.101 0.899 13 C -0.143 4.143 14 C -0.149 4.149 15 C 0.041 3.959 16 H 0.079 0.921 17 O -0.399 6.399 18 C -0.183 4.183 19 C -0.147 4.147 20 C -0.278 4.278 21 Cl 0.041 6.959 22 S 0.564 5.436 23 H 0.240 0.760 24 H 0.165 0.835 25 H -0.179 1.179 26 H -0.193 1.193 27 H 0.190 0.810 28 H 0.091 0.909 29 H 0.089 0.911 30 H 0.095 0.905 31 H 0.098 0.902 32 H 0.082 0.918 33 H 0.088 0.912 34 H 0.243 0.757 35 H 0.082 0.918 36 H 0.095 0.905 37 H 0.090 0.910 38 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges 2.328 4.347 3.075 5.812 hybrid contribution -1.150 -1.852 -0.403 2.217 sum 1.178 2.496 2.672 3.842 Atomic orbital electron populations 1.86631 1.17496 1.80173 1.50202 1.24603 0.83579 1.10319 0.95938 0.94577 0.90361 0.73326 0.80469 1.24942 1.07687 0.98891 1.03419 1.21087 0.98400 0.95235 0.93398 1.19449 1.06946 0.91972 0.99328 1.20445 0.75701 0.85266 0.81948 1.90919 1.45821 1.80837 1.23327 1.86535 1.65391 1.22735 1.51540 1.23286 1.01480 0.78472 0.96973 1.21210 0.99165 0.94499 0.95087 0.89918 1.21439 1.01034 0.93270 0.98564 1.21446 0.99203 1.00183 0.94119 1.21915 0.93577 0.89655 0.90719 0.92069 1.86479 1.51054 1.70486 1.31854 1.22214 1.00783 0.95947 0.99350 1.21516 0.98564 1.00145 0.94443 1.25946 1.02631 1.02545 0.96703 1.98440 1.73173 1.97235 1.27081 1.83250 1.44846 1.05499 1.09981 0.75997 0.83482 1.17937 1.19306 0.81009 0.90851 0.91050 0.90535 0.90199 0.91776 0.91242 0.75712 0.91781 0.90513 0.90984 0.91289 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.52 12.85 -148.98 -1.91 -0.39 16 2 C -0.03 0.19 2.94 71.24 0.21 0.40 16 3 Si 0.71 -4.46 30.90 68.60 2.12 -2.34 16 4 C -0.23 0.93 5.68 24.52 0.14 1.07 16 5 C -0.05 0.06 9.94 22.71 0.23 0.28 16 6 C -0.16 -0.59 5.98 -19.85 -0.12 -0.71 16 7 C 0.52 3.82 7.92 70.08 0.56 4.38 16 8 O -0.52 -6.37 14.71 19.57 0.29 -6.08 16 9 O -0.35 -1.41 9.49 -57.33 -0.54 -1.95 16 10 C 0.07 0.09 4.85 71.98 0.35 0.44 16 11 C -0.08 0.14 2.43 -10.80 -0.03 0.11 16 12 H 0.08 -0.07 8.14 -2.39 -0.02 -0.09 16 13 C -0.11 0.29 5.20 30.59 0.16 0.45 16 14 C -0.11 0.02 5.57 30.60 0.17 0.19 16 15 C 0.10 -0.06 3.47 30.59 0.11 0.05 16 16 H 0.06 -0.12 8.14 -2.39 -0.02 -0.14 16 17 O -0.59 -1.23 13.32 -148.98 -1.98 -3.22 16 18 C -0.15 0.34 5.55 30.61 0.17 0.51 16 19 C -0.11 0.26 5.11 30.61 0.16 0.41 16 20 C -0.13 -0.39 6.88 67.37 0.46 0.08 16 21 Cl 0.01 0.07 27.20 -2.72 -0.07 0.00 16 22 S 0.30 -1.05 20.17 -56.49 -1.14 -2.19 16 23 H 0.39 -3.22 8.70 -74.06 -0.64 -3.86 16 24 H 0.15 -1.27 7.96 -2.39 -0.02 -1.29 16 25 H -0.25 0.81 7.11 99.48 0.71 1.51 16 26 H -0.27 -0.13 7.11 99.48 0.71 0.58 16 27 H 0.17 -0.45 8.06 -2.91 -0.02 -0.47 16 28 H 0.07 0.10 8.14 -2.39 -0.02 0.09 16 29 H 0.07 0.13 8.14 -2.39 -0.02 0.11 16 30 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 31 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 32 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 33 H 0.07 0.05 8.14 -2.39 -0.02 0.03 16 34 H 0.39 -2.27 9.08 -74.06 -0.67 -2.94 16 35 H 0.06 -0.02 8.14 -2.39 -0.02 -0.04 16 36 H 0.08 -0.32 8.14 -2.39 -0.02 -0.34 16 37 H 0.07 -0.11 7.82 -2.39 -0.02 -0.12 16 38 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 Total: 0.00 -15.39 345.55 -0.87 -16.26 By element: Atomic # 1 Polarization: -7.56 SS G_CDS: -0.18 Total: -7.73 kcal Atomic # 6 Polarization: 5.10 SS G_CDS: 2.56 Total: 7.66 kcal Atomic # 8 Polarization: -7.49 SS G_CDS: -4.15 Total: -11.65 kcal Atomic # 14 Polarization: -4.46 SS G_CDS: 2.12 Total: -2.34 kcal Atomic # 16 Polarization: -1.05 SS G_CDS: -1.14 Total: -2.19 kcal Atomic # 17 Polarization: 0.07 SS G_CDS: -0.07 Total: 0.00 kcal Total: -15.39 -0.87 -16.26 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_13431042_16737258.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -130.390 kcal (2) G-P(sol) polarization free energy of solvation -15.390 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -145.780 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.866 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.256 kcal (6) G-S(sol) free energy of system = (1) + (5) -146.646 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds