Wall clock time and date at job start Sat Mar 6 2021 05:41:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.42899 * 114.00279 * 2 1 4 4 C 1.53002 * 112.84407 * 66.01861 * 3 2 1 5 5 F 1.39894 * 109.47243 * 283.56026 * 4 3 2 6 6 F 1.39903 * 109.47412 * 43.56566 * 4 3 2 7 7 F 1.39908 * 109.46618 * 163.56645 * 4 3 2 8 8 C 1.53778 * 113.61575 * 294.82455 * 3 2 1 9 9 C 1.53779 * 87.07923 * 270.79788 * 8 3 2 10 10 H 1.08997 * 113.61741 * 219.93436 * 9 8 3 11 11 C 1.53002 * 113.61479 * 89.11807 * 9 8 3 12 12 O 1.45200 * 109.47245 * 174.99945 * 11 9 8 13 13 C 1.34815 * 117.00272 * 179.97438 * 12 11 9 14 14 O 1.21578 * 119.99777 * 359.97438 * 13 12 11 15 15 C 1.46878 * 120.00141 * 179.72855 * 13 12 11 16 16 C 1.36324 * 123.50794 * 180.30471 * 15 13 12 17 17 Cl 1.73605 * 124.60944 * 359.96872 * 16 15 13 18 18 S 1.70441 * 110.78112 * 179.97438 * 16 15 13 19 19 C 1.75489 * 92.47525 * 359.97438 * 18 16 15 20 20 C 1.50697 * 124.67297 * 179.97438 * 19 18 16 21 21 O 1.42900 * 109.47583 * 244.97687 * 20 19 18 22 22 Si 1.86295 * 109.47270 * 4.98069 * 20 19 18 23 23 C 1.32663 * 110.65368 * 359.71924 * 19 18 16 24 24 C 1.53781 * 113.69076 * 197.28451 * 3 2 1 25 25 H 1.09000 * 109.46778 * 62.48164 * 1 2 3 26 26 H 1.09000 * 109.47082 * 182.47869 * 1 2 3 27 27 H 1.09004 * 109.46988 * 302.48197 * 1 2 3 28 28 H 1.08997 * 113.61311 * 156.24800 * 8 3 2 29 29 H 1.08998 * 113.68911 * 25.35343 * 8 3 2 30 30 H 1.08996 * 109.47118 * 55.00032 * 11 9 8 31 31 H 1.09004 * 109.47055 * 294.99676 * 11 9 8 32 32 H 1.09003 * 109.47128 * 124.97953 * 20 19 18 33 33 H 0.96704 * 113.99745 * 60.00372 * 21 20 19 34 34 H 1.48503 * 110.00091 * 58.67632 * 22 20 19 35 35 H 1.48504 * 110.00347 * 179.97438 * 22 20 19 36 36 H 1.08002 * 123.44963 * 180.26975 * 23 19 18 37 37 H 1.09002 * 113.61595 * 334.58093 * 24 3 2 38 38 H 1.08998 * 113.61438 * 203.67605 * 24 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 1.7284 2.0812 1.2883 5 9 0.4118 2.5536 1.2695 6 9 1.9052 1.2365 2.3895 7 9 2.6107 3.1628 1.3838 8 6 1.7205 2.1088 -1.2788 9 6 2.9972 1.4845 -1.8661 10 1 3.5925 2.1813 -2.4562 11 6 2.7553 0.1548 -2.5832 12 8 3.9903 -0.2935 -3.2015 13 6 3.9484 -1.4588 -3.8779 14 8 2.9078 -2.0836 -3.9486 15 6 5.1585 -1.9711 -4.5341 16 6 5.1956 -3.1363 -5.2407 17 17 3.8364 -4.1904 -5.4761 18 16 6.7577 -3.4176 -5.8616 19 6 7.3859 -1.9367 -5.1602 20 6 8.8107 -1.4634 -5.2904 21 8 9.4310 -1.4597 -4.0031 22 14 9.7439 -2.6079 -6.4261 23 6 6.4323 -1.2884 -4.5042 24 6 3.4900 1.3229 -0.4184 25 1 -0.3633 0.4748 -0.9114 26 1 -0.3633 -1.0267 0.0444 27 1 -0.3633 0.5519 0.8669 28 1 1.7859 3.1880 -1.1406 29 1 0.8088 1.8021 -1.7915 30 1 1.9929 0.2892 -3.3505 31 1 2.4184 -0.5906 -1.8627 32 1 8.8221 -0.4542 -5.7021 33 1 9.4564 -2.3271 -3.5762 34 1 9.0901 -2.6451 -7.7590 35 1 11.1504 -2.1517 -6.5634 36 1 6.5922 -0.3488 -3.9964 37 1 4.0067 0.3807 -0.2356 38 1 4.0391 2.1873 -0.0451 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_13431042_17321610.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 05:41:26 Heat of formation + Delta-G solvation = -240.371170 kcal Electronic energy + Delta-G solvation = -31766.257837 eV Core-core repulsion = 26508.231803 eV Total energy + Delta-G solvation = -5258.026034 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 387.028 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -51.17014 -48.71815 -48.59791 -41.82905 -41.06470 -39.24180 -38.18095 -37.62642 -37.08408 -36.82153 -31.87361 -30.79448 -28.39193 -27.78042 -26.99281 -26.91030 -25.85293 -23.36163 -22.32208 -21.10049 -20.67290 -19.78673 -19.51672 -19.44285 -19.23054 -18.28214 -17.69692 -17.57321 -17.47022 -17.18388 -16.55122 -16.45872 -15.92889 -15.81082 -15.66711 -15.52496 -15.51653 -15.23273 -15.03594 -14.87071 -14.78548 -14.74521 -14.58087 -14.38639 -14.24372 -14.12069 -13.70495 -13.42106 -13.23162 -13.04393 -12.82270 -12.63073 -12.42760 -12.42108 -12.26046 -12.12137 -11.99571 -11.76251 -11.61971 -11.27122 -10.85377 -10.73861 -10.00066 -9.82693 -5.32969 -0.76459 -0.31770 0.32832 0.56023 0.93311 1.01021 1.41736 1.55074 1.63618 1.75899 1.93484 2.00113 2.53469 2.61923 2.82589 3.10886 3.19910 3.30891 3.39103 3.44765 3.60466 3.76897 3.87437 4.09555 4.13383 4.17289 4.23332 4.24998 4.29524 4.37722 4.42555 4.50331 4.56857 4.66205 4.70170 4.72960 4.87249 4.91680 5.38338 5.62193 6.33445 6.74517 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.010 3.990 2 O -0.332 6.332 3 C 0.038 3.962 4 C 0.437 3.563 5 F -0.181 7.181 6 F -0.174 7.174 7 F -0.175 7.175 8 C -0.143 4.143 9 C -0.100 4.100 10 H 0.108 0.892 11 C 0.080 3.920 12 O -0.348 6.348 13 C 0.526 3.474 14 O -0.487 6.487 15 C -0.144 4.144 16 C -0.112 4.112 17 Cl 0.029 6.971 18 S 0.251 5.749 19 C -0.244 4.244 20 C -0.023 4.023 21 O -0.531 6.531 22 Si 0.651 3.349 23 C -0.049 4.049 24 C -0.112 4.112 25 H 0.055 0.945 26 H 0.103 0.897 27 H 0.055 0.945 28 H 0.113 0.887 29 H 0.095 0.905 30 H 0.076 0.924 31 H 0.093 0.907 32 H 0.129 0.871 33 H 0.382 0.618 34 H -0.234 1.234 35 H -0.228 1.228 36 H 0.167 0.833 37 H 0.099 0.901 38 H 0.118 0.882 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.791 -0.593 -2.150 3.572 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 O -0.249 6.249 3 C -0.005 4.005 4 C 0.383 3.617 5 F -0.163 7.163 6 F -0.155 7.155 7 F -0.156 7.156 8 C -0.180 4.180 9 C -0.118 4.118 10 H 0.126 0.874 11 C 0.006 3.994 12 O -0.265 6.265 13 C 0.369 3.631 14 O -0.375 6.375 15 C -0.162 4.162 16 C -0.259 4.259 17 Cl 0.059 6.941 18 S 0.516 5.484 19 C -0.361 4.361 20 C -0.137 4.137 21 O -0.337 6.337 22 Si 0.550 3.450 23 C -0.077 4.077 24 C -0.149 4.149 25 H 0.073 0.927 26 H 0.121 0.879 27 H 0.073 0.927 28 H 0.132 0.868 29 H 0.114 0.886 30 H 0.094 0.906 31 H 0.112 0.888 32 H 0.146 0.854 33 H 0.230 0.770 34 H -0.158 1.158 35 H -0.150 1.150 36 H 0.184 0.816 37 H 0.118 0.882 38 H 0.136 0.864 Dipole moment (debyes) X Y Z Total from point charges 3.583 -1.616 -3.906 5.541 hybrid contribution -1.827 1.813 1.378 2.920 sum 1.755 0.198 -2.529 3.085 Atomic orbital electron populations 1.23161 0.79380 1.04532 1.01518 1.88098 1.21242 1.21778 1.93818 1.24047 1.00091 0.86417 0.89906 1.21175 0.74285 0.78699 0.87583 1.93185 1.36940 1.89328 1.96835 1.93223 1.94931 1.70616 1.56720 1.93181 1.68849 1.57001 1.96578 1.23596 0.99611 1.01142 0.93690 1.22105 0.97638 0.96437 0.95628 0.87410 1.23008 0.83774 0.95574 0.97008 1.86495 1.38949 1.37730 1.63294 1.20076 0.87482 0.79122 0.76463 1.90944 1.31466 1.57538 1.57512 1.19335 0.94323 0.96335 1.06158 1.25656 0.98436 0.97415 1.04363 1.98453 1.39350 1.61610 1.94733 1.83316 0.95588 1.20242 1.49242 1.24842 1.01872 1.00623 1.08734 1.24438 0.88785 1.07183 0.93263 1.86554 1.79664 1.36437 1.31019 0.95159 0.82606 0.86891 0.80370 1.21103 0.88430 1.00490 0.97718 1.23279 0.90919 1.05835 0.94873 0.92653 0.87910 0.92687 0.86827 0.88633 0.90571 0.88842 0.85374 0.76970 1.15810 1.15043 0.81596 0.88225 0.86412 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.43 101.05 1.05 1.05 16 2 O -0.33 -0.26 8.36 -35.23 -0.29 -0.56 16 3 C 0.04 -0.01 0.85 -89.81 -0.08 -0.09 16 4 C 0.44 0.50 2.51 37.16 0.09 0.60 16 5 F -0.18 -0.26 15.24 2.25 0.03 -0.23 16 6 F -0.17 -0.51 17.09 2.25 0.04 -0.47 16 7 F -0.17 -0.19 15.82 2.25 0.04 -0.15 16 8 C -0.14 0.32 6.52 -25.92 -0.17 0.15 16 9 C -0.10 0.19 4.21 -89.81 -0.38 -0.19 16 10 H 0.11 -0.30 8.14 -51.93 -0.42 -0.73 16 11 C 0.08 0.01 5.06 37.16 0.19 0.20 16 12 O -0.35 -0.51 9.95 -40.81 -0.41 -0.92 16 13 C 0.53 1.59 7.92 34.23 0.27 1.86 16 14 O -0.49 -2.56 14.71 -19.33 -0.28 -2.84 16 15 C -0.14 -0.22 5.98 -104.61 -0.63 -0.85 16 16 C -0.11 -0.14 6.88 30.04 0.21 0.07 16 17 Cl 0.03 0.07 27.20 -51.86 -1.41 -1.34 16 18 S 0.25 -0.39 20.18 -107.50 -2.17 -2.56 16 19 C -0.24 0.39 5.65 -36.20 -0.20 0.18 16 20 C -0.02 0.06 2.94 36.00 0.11 0.16 16 21 O -0.53 1.01 12.88 -35.23 -0.45 0.55 16 22 Si 0.65 -1.83 30.92 -169.99 -5.26 -7.08 16 23 C -0.05 0.02 9.98 -38.99 -0.39 -0.37 16 24 C -0.11 0.15 6.89 -25.92 -0.18 -0.02 16 25 H 0.05 -0.12 6.76 -51.93 -0.35 -0.47 16 26 H 0.10 -0.18 8.14 -51.93 -0.42 -0.61 16 27 H 0.05 -0.03 6.25 -51.93 -0.32 -0.35 16 28 H 0.11 -0.37 8.06 -51.93 -0.42 -0.79 16 29 H 0.10 -0.27 6.70 -51.93 -0.35 -0.62 16 30 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 31 H 0.09 0.12 6.12 -51.93 -0.32 -0.20 16 32 H 0.13 -0.32 7.96 -51.93 -0.41 -0.74 16 33 H 0.38 -2.14 8.70 45.56 0.40 -1.75 16 34 H -0.23 0.20 7.11 56.52 0.40 0.60 16 35 H -0.23 0.00 7.11 56.52 0.40 0.41 16 36 H 0.17 -0.22 8.06 -52.49 -0.42 -0.64 16 37 H 0.10 -0.08 8.10 -51.93 -0.42 -0.50 16 38 H 0.12 -0.29 7.01 -51.93 -0.36 -0.65 16 LS Contribution 360.52 15.07 5.43 5.43 Total: 0.00 -6.59 360.52 -8.28 -14.87 By element: Atomic # 1 Polarization: -4.01 SS G_CDS: -3.45 Total: -7.46 kcal Atomic # 6 Polarization: 2.85 SS G_CDS: -0.10 Total: 2.75 kcal Atomic # 8 Polarization: -2.33 SS G_CDS: -1.44 Total: -3.77 kcal Atomic # 9 Polarization: -0.97 SS G_CDS: 0.11 Total: -0.86 kcal Atomic # 14 Polarization: -1.83 SS G_CDS: -5.26 Total: -7.08 kcal Atomic # 16 Polarization: -0.39 SS G_CDS: -2.17 Total: -2.56 kcal Atomic # 17 Polarization: 0.07 SS G_CDS: -1.41 Total: -1.34 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -6.59 -8.28 -14.87 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_13431042_17321610.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -225.496 kcal (2) G-P(sol) polarization free energy of solvation -6.590 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -232.087 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.284 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.875 kcal (6) G-S(sol) free energy of system = (1) + (5) -240.371 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds