Wall clock time and date at job start Sat Mar 6 2021 03:32:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86298 * 1 3 3 C 1.86299 * 109.47314 * 2 1 4 4 C 1.86308 * 109.46942 * 240.00153 * 2 1 3 5 5 C 1.86300 * 109.47263 * 120.00129 * 2 1 3 6 6 O 1.45205 * 109.46990 * 60.00219 * 5 2 1 7 7 C 1.34814 * 117.00071 * 74.99948 * 6 5 2 8 8 O 1.21573 * 120.00299 * 359.97438 * 7 6 5 9 9 C 1.46886 * 119.99673 * 180.02562 * 7 6 5 10 10 C 1.36320 * 123.50796 * 180.02562 * 9 7 6 11 11 Cl 1.73606 * 124.60850 * 359.97438 * 10 9 7 12 12 S 1.70439 * 110.77967 * 179.97438 * 10 9 7 13 13 C 1.75484 * 92.47875 * 359.97438 * 12 10 9 14 14 C 1.50701 * 124.67604 * 180.02562 * 13 12 10 15 15 O 1.42903 * 109.46878 * 245.02043 * 14 13 12 16 16 Si 1.86300 * 109.46948 * 5.02261 * 14 13 12 17 17 H 1.48503 * 109.47262 * 60.00072 * 16 14 13 18 18 H 1.48500 * 109.46912 * 180.02562 * 16 14 13 19 19 H 1.48503 * 109.46942 * 299.99736 * 16 14 13 20 20 C 1.32670 * 110.65339 * 0.26144 * 13 12 10 21 21 H 1.09011 * 109.46799 * 299.99817 * 1 2 3 22 22 H 1.08997 * 109.46989 * 59.99488 * 1 2 3 23 23 H 1.09001 * 109.47186 * 179.97438 * 1 2 3 24 24 H 1.08997 * 109.47170 * 180.02562 * 3 2 1 25 25 H 1.09007 * 109.47446 * 300.00048 * 3 2 1 26 26 H 1.08998 * 109.46906 * 60.00052 * 3 2 1 27 27 H 1.09001 * 109.47137 * 299.99977 * 4 2 1 28 28 H 1.08999 * 109.46741 * 59.99871 * 4 2 1 29 29 H 1.08997 * 109.47200 * 180.02562 * 4 2 1 30 30 H 1.08994 * 109.47258 * 299.99548 * 5 2 1 31 31 H 1.09007 * 109.47056 * 179.97438 * 5 2 1 32 32 H 1.09001 * 109.46927 * 125.01978 * 14 13 12 33 33 H 0.96695 * 113.99582 * 59.99825 * 15 14 13 34 34 H 1.07991 * 123.44933 * 179.73607 * 20 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7564 0.0000 4 6 2.4839 -0.8782 -1.5212 5 6 2.4840 -0.8783 1.5211 6 8 2.0000 -2.2473 1.5210 7 6 2.5968 -3.1074 0.6716 8 8 3.4970 -2.7233 -0.0497 9 6 2.1587 -4.5083 0.6168 10 6 2.7113 -5.4377 -0.2133 11 17 4.0052 -5.1204 -1.3265 12 16 1.9592 -6.9536 -0.0098 13 6 0.8726 -6.3345 1.2212 14 6 -0.1722 -7.1544 1.9335 15 8 -1.4723 -6.6677 1.5944 16 14 -0.0218 -8.9375 1.4154 17 1 1.3293 -9.4432 1.7678 18 1 -1.0516 -9.7453 2.1169 19 1 -0.2236 -9.0454 -0.0519 20 6 1.0941 -5.0440 1.4348 21 1 -0.3633 0.5139 0.8901 22 1 -0.3633 0.5139 -0.8899 23 1 -0.3633 -1.0277 -0.0005 24 1 3.5740 1.7564 -0.0005 25 1 2.1207 2.2704 -0.8900 26 1 2.1207 2.2702 0.8900 27 1 2.1206 -1.9059 -1.5213 28 1 2.1205 -0.3643 -2.4111 29 1 3.5739 -0.8787 -1.5210 30 1 2.1208 -0.3644 2.4111 31 1 3.5741 -0.8786 1.5208 32 1 -0.0240 -7.0752 3.0105 33 1 -1.6732 -6.7082 0.6495 34 1 0.5377 -4.4547 2.1485 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_13431042_4858416.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 03:32:50 Heat of formation + Delta-G solvation = -120.701246 kcal Electronic energy + Delta-G solvation = -19224.241314 eV Core-core repulsion = 16013.080952 eV Total energy + Delta-G solvation = -3211.160362 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 308.026 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -41.41106 -39.23819 -38.13973 -37.28901 -36.97091 -31.83974 -29.72583 -28.57674 -28.42680 -28.30446 -26.97709 -25.55129 -22.25743 -20.98599 -19.52353 -18.32600 -17.80221 -17.55422 -17.35472 -16.47608 -16.10783 -15.57352 -14.94866 -14.87682 -14.50020 -14.36124 -14.30672 -14.01998 -13.91963 -13.76692 -13.38021 -13.23329 -13.06093 -13.02333 -12.95395 -12.63631 -12.55202 -12.43606 -12.34957 -12.17677 -11.88593 -11.23027 -10.89247 -10.74348 -10.70442 -10.37115 -9.97552 -9.80487 -0.74860 -0.32719 0.32012 0.58342 0.89091 0.95438 1.22871 1.31926 1.48988 1.60217 1.74436 1.84504 1.99101 2.11934 2.55365 3.15678 3.42417 3.78710 3.91643 4.22433 4.32221 4.41014 4.65492 4.67905 4.69957 4.75179 4.75728 4.78379 4.91602 4.92887 4.98607 5.38439 5.44414 5.52752 5.77456 6.32158 6.82144 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.445 4.445 2 Si 0.997 3.003 3 C -0.446 4.446 4 C -0.435 4.435 5 C -0.236 4.236 6 O -0.329 6.329 7 C 0.509 3.491 8 O -0.474 6.474 9 C -0.141 4.141 10 C -0.111 4.111 11 Cl 0.030 6.970 12 S 0.232 5.768 13 C -0.242 4.242 14 C -0.036 4.036 15 O -0.530 6.530 16 Si 0.883 3.117 17 H -0.230 1.230 18 H -0.220 1.220 19 H -0.230 1.230 20 C -0.048 4.048 21 H 0.070 0.930 22 H 0.071 0.929 23 H 0.070 0.930 24 H 0.071 0.929 25 H 0.074 0.926 26 H 0.070 0.930 27 H 0.065 0.935 28 H 0.061 0.939 29 H 0.077 0.923 30 H 0.110 0.890 31 H 0.081 0.919 32 H 0.132 0.868 33 H 0.379 0.621 34 H 0.169 0.831 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.200 -1.499 0.970 2.833 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.553 4.553 2 Si 1.193 2.807 3 C -0.554 4.554 4 C -0.543 4.543 5 C -0.355 4.355 6 O -0.245 6.245 7 C 0.351 3.649 8 O -0.362 6.362 9 C -0.159 4.159 10 C -0.257 4.257 11 Cl 0.059 6.941 12 S 0.497 5.503 13 C -0.359 4.359 14 C -0.150 4.150 15 O -0.335 6.335 16 Si 0.702 3.298 17 H -0.153 1.153 18 H -0.142 1.142 19 H -0.153 1.153 20 C -0.076 4.076 21 H 0.089 0.911 22 H 0.090 0.910 23 H 0.090 0.910 24 H 0.090 0.910 25 H 0.093 0.907 26 H 0.089 0.911 27 H 0.085 0.915 28 H 0.080 0.920 29 H 0.096 0.904 30 H 0.129 0.871 31 H 0.100 0.900 32 H 0.150 0.850 33 H 0.227 0.773 34 H 0.187 0.813 Dipole moment (debyes) X Y Z Total from point charges -1.545 -3.543 0.430 3.890 hybrid contribution 0.270 2.013 0.132 2.035 sum -1.275 -1.531 0.562 2.070 Atomic orbital electron populations 1.26056 1.20012 1.04714 1.04555 0.79741 0.67747 0.67121 0.66134 1.26039 1.06493 1.18063 1.04820 1.26232 1.07055 1.07265 1.13778 1.28361 1.05353 0.83690 1.18112 1.86487 1.58879 1.21165 1.57977 1.20139 0.80739 0.85645 0.78397 1.90922 1.27973 1.77615 1.39703 1.19377 1.01866 0.92211 1.02427 1.25495 0.99553 1.00680 0.99983 1.98451 1.43542 1.95013 1.57073 1.83468 1.27129 1.05316 1.34385 1.24845 1.06084 0.99469 1.05543 1.24380 0.81416 1.06158 1.02997 1.86566 1.29570 1.87071 1.30285 0.86402 0.84271 0.76001 0.83097 1.15272 1.14195 1.15271 1.21137 0.94600 0.93648 0.98265 0.91065 0.91011 0.91043 0.90972 0.90672 0.91055 0.91542 0.91960 0.90387 0.87131 0.90017 0.85003 0.77311 0.81337 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.25 8.65 101.05 0.87 1.12 16 2 Si 1.00 -1.05 12.12 -169.99 -2.06 -3.11 16 3 C -0.45 0.47 8.65 101.05 0.87 1.35 16 4 C -0.44 -0.63 7.10 101.05 0.72 0.09 16 5 C -0.24 0.01 5.40 101.05 0.55 0.56 16 6 O -0.33 -0.59 9.64 -40.80 -0.39 -0.99 16 7 C 0.51 1.49 6.70 34.23 0.23 1.72 16 8 O -0.47 -2.02 10.62 -19.32 -0.21 -2.23 16 9 C -0.14 -0.26 5.98 -104.60 -0.63 -0.89 16 10 C -0.11 -0.19 6.88 30.04 0.21 0.02 16 11 Cl 0.03 0.08 27.20 -51.86 -1.41 -1.33 16 12 S 0.23 -0.12 20.18 -107.50 -2.17 -2.29 16 13 C -0.24 0.26 5.65 -36.20 -0.20 0.05 16 14 C -0.04 0.08 2.94 36.01 0.11 0.19 16 15 O -0.53 0.86 12.88 -35.23 -0.45 0.41 16 16 Si 0.88 -1.94 26.20 -169.99 -4.45 -6.40 16 17 H -0.23 0.38 7.11 56.52 0.40 0.78 16 18 H -0.22 0.26 7.11 56.52 0.40 0.66 16 19 H -0.23 0.50 7.11 56.52 0.40 0.91 16 20 C -0.05 0.00 9.98 -38.99 -0.39 -0.39 16 21 H 0.07 -0.07 7.96 -51.92 -0.41 -0.49 16 22 H 0.07 -0.05 7.96 -51.93 -0.41 -0.46 16 23 H 0.07 0.00 7.96 -51.93 -0.41 -0.41 16 24 H 0.07 -0.06 7.96 -51.93 -0.41 -0.48 16 25 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 26 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 27 H 0.07 0.18 6.27 -51.93 -0.33 -0.14 16 28 H 0.06 0.05 7.96 -51.93 -0.41 -0.36 16 29 H 0.08 0.20 7.42 -51.93 -0.39 -0.19 16 30 H 0.11 -0.22 7.96 -51.93 -0.41 -0.63 16 31 H 0.08 0.03 7.52 -51.93 -0.39 -0.36 16 32 H 0.13 -0.45 7.96 -51.93 -0.41 -0.87 16 33 H 0.38 -1.80 8.70 45.56 0.40 -1.40 16 34 H 0.17 -0.19 8.06 -52.49 -0.42 -0.61 16 LS Contribution 317.74 15.07 4.79 4.79 Total: 0.00 -4.72 317.74 -7.67 -12.39 By element: Atomic # 1 Polarization: -1.42 SS G_CDS: -3.65 Total: -5.07 kcal Atomic # 6 Polarization: 1.48 SS G_CDS: 2.33 Total: 3.82 kcal Atomic # 8 Polarization: -1.75 SS G_CDS: -1.05 Total: -2.80 kcal Atomic # 14 Polarization: -2.99 SS G_CDS: -6.51 Total: -9.51 kcal Atomic # 16 Polarization: -0.12 SS G_CDS: -2.17 Total: -2.29 kcal Atomic # 17 Polarization: 0.08 SS G_CDS: -1.41 Total: -1.33 kcal Total LS contribution 4.79 Total: 4.79 kcal Total: -4.72 -7.67 -12.39 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_13431042_4858416.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -108.312 kcal (2) G-P(sol) polarization free energy of solvation -4.720 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.032 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.669 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -12.390 kcal (6) G-S(sol) free energy of system = (1) + (5) -120.701 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds