Wall clock time and date at job start Sat Mar 6 2021 04:15:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86300 * 109.46951 * 2 1 4 4 C 1.50701 * 109.47268 * 240.00480 * 2 1 3 5 5 C 1.37873 * 119.93214 * 254.98080 * 4 2 1 6 6 C 1.39676 * 119.85737 * 180.02562 * 5 4 2 7 7 C 1.47682 * 120.13418 * 180.02562 * 6 5 4 8 8 O 1.21476 * 120.00223 * 359.97136 * 7 6 5 9 9 O 1.34719 * 119.99838 * 179.97438 * 7 6 5 10 10 C 1.45201 * 116.99993 * 179.97438 * 9 7 6 11 11 C 1.52999 * 109.46782 * 179.97438 * 10 9 7 12 12 H 1.09000 * 112.85604 * 316.19587 * 11 10 9 13 13 C 1.53788 * 113.61442 * 87.50636 * 11 10 9 14 14 C 1.53782 * 87.08066 * 139.97597 * 13 11 10 15 15 H 1.09009 * 113.61303 * 89.11614 * 14 13 11 16 16 O 1.42898 * 113.68917 * 220.00320 * 14 13 11 17 17 C 1.53778 * 87.08404 * 334.56587 * 14 13 11 18 18 C 1.39639 * 119.72842 * 359.97438 * 6 5 4 19 19 C 1.37914 * 119.85325 * 0.02562 * 18 6 5 20 20 C 1.38465 * 120.14196 * 0.02562 * 19 18 6 21 21 Br 1.89103 * 119.85997 * 179.72383 * 20 19 18 22 22 H 0.96700 * 113.99732 * 59.99841 * 1 2 3 23 23 H 1.08996 * 109.47608 * 120.00078 * 2 1 3 24 24 H 1.48501 * 109.99725 * 60.00532 * 3 2 1 25 25 H 1.48497 * 110.00157 * 181.31783 * 3 2 1 26 26 H 1.07998 * 120.06511 * 0.02562 * 5 4 2 27 27 H 1.09000 * 109.47306 * 299.99528 * 10 9 7 28 28 H 1.08999 * 109.47020 * 60.00068 * 10 9 7 29 29 H 1.09001 * 113.60882 * 254.52595 * 13 11 10 30 30 H 1.08998 * 113.61421 * 25.42851 * 13 11 10 31 31 H 0.96699 * 114.00305 * 277.53388 * 16 14 13 32 32 H 1.08993 * 113.61769 * 270.88393 * 17 14 13 33 33 H 1.08995 * 113.68973 * 139.98680 * 17 14 13 34 34 H 1.07990 * 120.07688 * 179.97438 * 18 6 5 35 35 H 1.08004 * 119.93290 * 180.02562 * 19 18 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 2.4526 -1.9824 -1.1259 6 6 2.9183 -2.6391 -2.2674 7 6 3.4773 -4.0020 -2.1625 8 8 3.5333 -4.5540 -1.0818 9 8 3.9252 -4.6330 -3.2652 10 6 4.4620 -5.9704 -3.0872 11 6 4.9165 -6.5217 -4.4402 12 1 4.2009 -6.3263 -5.2389 13 6 6.3639 -6.1490 -4.8025 14 6 6.5100 -7.5768 -5.3548 15 1 6.2311 -7.6696 -6.4045 16 8 7.7715 -8.1800 -5.0605 17 6 5.3907 -7.9834 -4.3818 18 6 2.8521 -2.0021 -3.5082 19 6 2.3285 -0.7295 -3.5995 20 6 1.8695 -0.0834 -2.4641 21 35 1.1602 1.6645 -2.5973 22 1 -0.3933 0.4417 -0.7650 23 1 1.7924 -0.5138 0.8899 24 1 1.5615 2.4678 1.2086 25 1 3.5345 1.7704 -0.0321 26 1 2.5007 -2.4700 -0.1635 27 1 5.3119 -5.9330 -2.4057 28 1 3.6910 -6.6190 -2.6714 29 1 6.4372 -5.3755 -5.5670 30 1 6.9935 -5.9498 -3.9354 31 1 8.4795 -7.9281 -5.6691 32 1 5.7543 -8.2856 -3.3998 33 1 4.6778 -8.6909 -4.8054 34 1 3.2109 -2.5044 -4.3943 35 1 2.2763 -0.2357 -4.5587 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_13441022_11354868.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 04:15:03 Heat of formation + Delta-G solvation = -115.864876 kcal Electronic energy + Delta-G solvation = -21255.990153 eV Core-core repulsion = 17653.629825 eV Total energy + Delta-G solvation = -3602.360328 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.019 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -41.89668 -40.81521 -40.17876 -37.83495 -37.53947 -36.06225 -34.29939 -33.04967 -31.48839 -29.66757 -27.02257 -26.88757 -25.51070 -23.56288 -23.38691 -21.82202 -20.69936 -19.29775 -18.75997 -18.24313 -17.81447 -17.55776 -17.19699 -17.00014 -16.51324 -16.30450 -15.62828 -15.38508 -15.17703 -15.14310 -14.59628 -14.33222 -14.04412 -13.77295 -13.59194 -13.51026 -13.09821 -12.88802 -12.74184 -12.52813 -12.41239 -12.25174 -12.14898 -11.92627 -11.80741 -11.66896 -11.33650 -10.87132 -10.70136 -10.34075 -10.11459 -4.65728 -0.89762 -0.15611 -0.12402 1.10211 1.23594 1.38834 1.66610 2.07907 2.28855 3.04476 3.16725 3.26775 3.32512 3.37290 3.42607 3.46566 3.69341 3.77972 3.78458 3.85460 4.04851 4.06572 4.11749 4.30483 4.35916 4.46219 4.50763 4.63677 4.63963 4.66610 4.77569 4.82179 4.88421 4.97815 5.18004 5.24536 5.28914 6.38006 6.56074 6.60846 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.062 4.062 3 Si 0.534 3.466 4 C -0.090 4.090 5 C -0.031 4.031 6 C -0.102 4.102 7 C 0.509 3.491 8 O -0.495 6.495 9 O -0.349 6.349 10 C 0.080 3.920 11 C -0.111 4.111 12 H 0.108 0.892 13 C -0.165 4.165 14 C 0.077 3.923 15 H 0.086 0.914 16 O -0.560 6.560 17 C -0.120 4.120 18 C -0.055 4.055 19 C -0.090 4.090 20 C -0.069 4.069 21 Br 0.073 6.927 22 H 0.373 0.627 23 H 0.119 0.881 24 H -0.225 1.225 25 H -0.240 1.240 26 H 0.151 0.849 27 H 0.076 0.924 28 H 0.077 0.923 29 H 0.075 0.925 30 H 0.091 0.909 31 H 0.381 0.619 32 H 0.095 0.905 33 H 0.082 0.918 34 H 0.154 0.846 35 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.000 1.217 -7.477 7.576 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.333 6.333 2 C -0.172 4.172 3 Si 0.431 3.569 4 C -0.092 4.092 5 C -0.051 4.051 6 C -0.103 4.103 7 C 0.352 3.648 8 O -0.384 6.384 9 O -0.266 6.266 10 C 0.007 3.993 11 C -0.129 4.129 12 H 0.126 0.874 13 C -0.202 4.202 14 C 0.017 3.983 15 H 0.103 0.897 16 O -0.365 6.365 17 C -0.158 4.158 18 C -0.074 4.074 19 C -0.109 4.109 20 C -0.148 4.148 21 Br 0.159 6.841 22 H 0.221 0.779 23 H 0.136 0.864 24 H -0.148 1.148 25 H -0.164 1.164 26 H 0.169 0.831 27 H 0.095 0.905 28 H 0.095 0.905 29 H 0.094 0.906 30 H 0.110 0.890 31 H 0.229 0.771 32 H 0.113 0.887 33 H 0.100 0.900 34 H 0.172 0.828 35 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 0.000 1.692 -5.735 5.979 hybrid contribution 0.608 -0.845 -0.056 1.043 sum 0.608 0.847 -5.791 5.884 Atomic orbital electron populations 1.86566 1.16290 1.81328 1.49155 1.24941 0.85582 1.10193 0.96504 0.93750 0.84673 0.81212 0.97299 1.20180 0.99474 0.94940 0.94607 1.21150 0.92932 0.92108 0.98861 1.19307 1.03639 0.92197 0.95165 1.20978 0.75309 0.86161 0.82309 1.90892 1.52097 1.66728 1.28648 1.86503 1.72173 1.31640 1.36237 1.23162 0.98965 0.79271 0.97940 1.22382 0.97364 0.96393 0.96791 0.87400 1.23802 0.95931 0.98084 1.02415 1.23277 0.84571 0.92342 0.98061 0.89660 1.86532 1.19665 1.72285 1.58046 1.23074 0.96496 0.95066 1.01148 1.21554 0.94835 0.93640 0.97340 1.21134 0.97342 0.94747 0.97725 1.21993 1.04132 0.92290 0.96423 1.96347 1.83098 1.16596 1.88103 0.77916 0.86353 1.14766 1.16351 0.83140 0.90519 0.90456 0.90638 0.89024 0.77150 0.88681 0.89956 0.82841 0.83060 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.89 12.88 -35.23 -0.45 -1.34 16 2 C -0.06 -0.07 2.79 36.01 0.10 0.03 16 3 Si 0.53 0.81 26.91 -169.99 -4.57 -3.76 16 4 C -0.09 -0.03 4.78 -104.65 -0.50 -0.53 16 5 C -0.03 -0.03 9.21 -39.18 -0.36 -0.39 16 6 C -0.10 -0.05 5.87 -104.98 -0.62 -0.67 16 7 C 0.51 1.07 7.90 34.59 0.27 1.34 16 8 O -0.50 -2.45 16.14 -19.25 -0.31 -2.76 16 9 O -0.35 -0.22 9.47 -40.54 -0.38 -0.61 16 10 C 0.08 -0.02 5.31 37.16 0.20 0.18 16 11 C -0.11 0.20 4.02 -89.80 -0.36 -0.16 16 12 H 0.11 -0.28 8.14 -51.93 -0.42 -0.71 16 13 C -0.16 0.28 7.47 -25.91 -0.19 0.09 16 14 C 0.08 -0.11 5.21 -25.92 -0.14 -0.24 16 15 H 0.09 -0.25 8.14 -51.92 -0.42 -0.67 16 16 O -0.56 -0.07 13.67 -35.23 -0.48 -0.56 16 17 C -0.12 0.16 7.47 -25.92 -0.19 -0.03 16 18 C -0.05 0.10 9.62 -39.18 -0.38 -0.27 16 19 C -0.09 0.23 9.77 -39.62 -0.39 -0.15 16 20 C -0.07 0.09 5.79 -39.40 -0.23 -0.14 16 21 Br 0.07 -0.19 26.02 -68.01 -1.77 -1.96 16 22 H 0.37 -0.49 7.31 45.56 0.33 -0.16 16 23 H 0.12 0.13 7.77 -51.93 -0.40 -0.28 16 24 H -0.22 -0.97 7.11 56.52 0.40 -0.56 16 25 H -0.24 -0.95 7.11 56.52 0.40 -0.55 16 26 H 0.15 0.16 7.59 -52.49 -0.40 -0.24 16 27 H 0.08 0.02 7.84 -51.93 -0.41 -0.38 16 28 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 29 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 30 H 0.09 -0.07 7.90 -51.93 -0.41 -0.48 16 31 H 0.38 -1.48 9.12 45.56 0.42 -1.07 16 32 H 0.09 -0.05 8.10 -51.93 -0.42 -0.47 16 33 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 34 H 0.15 -0.58 7.61 -52.49 -0.40 -0.97 16 35 H 0.15 -0.78 8.06 -52.48 -0.42 -1.20 16 LS Contribution 316.50 15.07 4.77 4.77 Total: 0.00 -7.13 316.50 -9.41 -16.54 By element: Atomic # 1 Polarization: -5.94 SS G_CDS: -3.42 Total: -9.37 kcal Atomic # 6 Polarization: 1.83 SS G_CDS: -2.78 Total: -0.95 kcal Atomic # 8 Polarization: -3.64 SS G_CDS: -1.63 Total: -5.27 kcal Atomic # 14 Polarization: 0.81 SS G_CDS: -4.57 Total: -3.76 kcal Atomic # 35 Polarization: -0.19 SS G_CDS: -1.77 Total: -1.96 kcal Total LS contribution 4.77 Total: 4.77 kcal Total: -7.13 -9.41 -16.54 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_13441022_11354868.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -99.324 kcal (2) G-P(sol) polarization free energy of solvation -7.131 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -106.455 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.410 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.541 kcal (6) G-S(sol) free energy of system = (1) + (5) -115.865 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds