Wall clock time and date at job start Sat Mar 6 2021 03:38:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 C 1.52999 * 109.47340 * 2 1 4 4 C 1.52996 * 109.47275 * 239.99617 * 2 1 3 5 5 O 1.42907 * 109.46987 * 119.99724 * 2 1 3 6 6 C 1.42896 * 113.99942 * 60.00108 * 5 2 1 7 7 H 1.09006 * 112.90579 * 341.25377 * 6 5 2 8 8 C 1.53781 * 113.61620 * 112.49945 * 6 5 2 9 9 C 1.53782 * 87.08106 * 139.98204 * 8 6 5 10 10 H 1.09004 * 113.69323 * 89.13018 * 9 8 6 11 11 C 1.53004 * 113.61623 * 220.02361 * 9 8 6 12 12 O 1.45205 * 109.46922 * 272.49848 * 11 9 8 13 13 C 1.34712 * 116.99868 * 180.02562 * 12 11 9 14 14 O 1.21481 * 120.00192 * 359.97438 * 13 12 11 15 15 C 1.47678 * 119.99954 * 179.97438 * 13 12 11 16 16 C 1.39640 * 120.13828 * 179.97438 * 15 13 12 17 17 C 1.37914 * 119.85963 * 180.02562 * 16 15 13 18 18 C 1.50700 * 119.93315 * 180.02562 * 17 16 15 19 19 O 1.42900 * 109.46715 * 16.31985 * 18 17 16 20 20 Si 1.86296 * 109.47156 * 256.32036 * 18 17 16 21 21 C 1.38466 * 120.13753 * 359.97438 * 17 16 15 22 22 Br 1.89101 * 119.86040 * 180.27526 * 21 17 16 23 23 C 1.38508 * 120.28140 * 359.97438 * 21 17 16 24 24 C 1.37871 * 120.14257 * 359.97438 * 23 21 17 25 25 C 1.53781 * 113.61562 * 210.00230 * 6 5 2 26 26 H 1.08992 * 109.47534 * 300.00521 * 1 2 3 27 27 H 1.09003 * 109.47032 * 60.00568 * 1 2 3 28 28 H 1.09001 * 109.47117 * 179.97438 * 1 2 3 29 29 H 1.09000 * 109.47149 * 179.97438 * 3 2 1 30 30 H 1.09001 * 109.46984 * 300.00051 * 3 2 1 31 31 H 1.09001 * 109.47405 * 59.99344 * 3 2 1 32 32 H 1.09001 * 109.47444 * 300.00285 * 4 2 1 33 33 H 1.09006 * 109.47373 * 60.00454 * 4 2 1 34 34 H 1.09007 * 109.47269 * 179.97438 * 4 2 1 35 35 H 1.08997 * 113.60926 * 25.43713 * 8 6 5 36 36 H 1.08998 * 113.61685 * 254.53240 * 8 6 5 37 37 H 1.08999 * 109.47158 * 152.49685 * 11 9 8 38 38 H 1.08999 * 109.46732 * 32.49323 * 11 9 8 39 39 H 1.08000 * 120.07048 * 0.04234 * 16 15 13 40 40 H 1.09001 * 109.47016 * 136.31630 * 18 17 16 41 41 H 0.96705 * 113.99603 * 180.02562 * 19 18 17 42 42 H 1.48505 * 110.00081 * 305.38072 * 20 18 17 43 43 H 1.48498 * 110.00182 * 66.69855 * 20 18 17 44 44 H 1.08003 * 119.92908 * 180.02562 * 23 21 17 45 45 H 1.08004 * 120.07129 * 179.97438 * 24 23 21 46 46 H 1.08997 * 113.61435 * 105.46896 * 25 6 5 47 47 H 1.08996 * 113.68808 * 334.57335 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2491 5 8 2.0063 -0.6736 1.1669 6 6 1.5846 -2.0355 1.2646 7 1 0.7241 -2.2595 0.6341 8 6 2.7333 -3.0478 1.1214 9 6 2.0561 -3.8557 2.2411 10 1 1.3243 -4.5779 1.8790 11 6 3.0418 -4.4601 3.2431 12 8 3.4833 -5.7581 2.7648 13 6 4.3600 -6.4287 3.5371 14 8 4.7455 -5.9422 4.5813 15 6 4.8524 -7.7552 3.1143 16 6 5.7616 -8.4526 3.9123 17 6 6.2181 -9.6907 3.5117 18 6 7.1990 -10.4451 4.3720 19 8 7.2122 -9.8817 5.6852 20 14 8.9017 -10.3221 3.6263 21 6 5.7764 -10.2428 2.3212 22 35 6.4014 -11.9445 1.7832 23 6 4.8737 -9.5565 1.5256 24 6 4.4090 -8.3185 1.9155 25 6 1.4331 -2.5310 2.7125 26 1 -0.3634 0.5139 0.8898 27 1 -0.3633 0.5138 -0.8901 28 1 -0.3633 -1.0277 -0.0005 29 1 3.1300 1.4424 0.0005 30 1 1.6767 1.9563 -0.8900 31 1 1.6766 1.9564 0.8899 32 1 1.6766 -1.7490 -1.2492 33 1 1.6767 -0.2075 -2.1393 34 1 3.1300 -0.7209 -1.2494 35 1 3.7070 -2.6456 1.4010 36 1 2.7462 -3.5605 0.1596 37 1 2.5518 -4.5765 4.2097 38 1 3.9027 -3.8000 3.3491 39 1 6.1064 -8.0233 4.8415 40 1 6.9019 -11.4923 4.4288 41 1 7.8231 -10.3185 6.2944 42 1 8.8730 -10.7847 2.2154 43 1 9.3844 -8.9192 3.6909 44 1 4.5326 -9.9926 0.5983 45 1 3.7055 -7.7842 1.2941 46 1 0.3963 -2.6265 3.0350 47 1 2.0507 -1.9883 3.4280 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_13441022_14598394.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 03:38:27 Heat of formation + Delta-G solvation = -111.354156 kcal Electronic energy + Delta-G solvation = -28693.499002 eV Core-core repulsion = 24469.183798 eV Total energy + Delta-G solvation = -4224.315204 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 399.081 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -41.77591 -40.95718 -40.31385 -38.55864 -37.75277 -37.21422 -34.12813 -33.87954 -32.78590 -31.04723 -29.68822 -28.43233 -28.35394 -27.07607 -26.69751 -25.33557 -23.56662 -23.06598 -21.73139 -20.90111 -20.63596 -18.85137 -18.65742 -18.14339 -17.69550 -17.45263 -17.00406 -16.56981 -16.54330 -16.10587 -16.00412 -15.89394 -15.62182 -15.06378 -14.85441 -14.64529 -14.35089 -14.25773 -14.17433 -13.89160 -13.51308 -13.37369 -13.35381 -13.22262 -13.07083 -12.86096 -12.79865 -12.71093 -12.61516 -12.45162 -12.37327 -12.22049 -11.91448 -11.79897 -11.70018 -11.47687 -11.36890 -11.22130 -11.20510 -10.99171 -10.38329 -10.09511 -9.73341 -5.10701 -0.73567 -0.02358 0.29961 1.12059 1.40559 1.48502 1.62378 1.98346 2.44525 2.67579 2.91445 3.31786 3.39001 3.46221 3.53493 3.67200 3.71098 3.77975 3.85525 3.91605 3.94239 4.03853 4.06908 4.08937 4.15041 4.18190 4.29190 4.41879 4.45986 4.52433 4.60243 4.67349 4.70126 4.71975 4.74410 4.77309 4.81106 4.85651 4.88058 4.93228 4.95967 5.01555 5.06099 5.10700 5.24404 5.26897 5.31756 5.38444 5.40969 6.38146 6.47837 6.68156 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.104 3.896 3 C -0.139 4.139 4 C -0.176 4.176 5 O -0.361 6.361 6 C 0.062 3.938 7 H 0.093 0.907 8 C -0.149 4.149 9 C -0.111 4.111 10 H 0.106 0.894 11 C 0.081 3.919 12 O -0.350 6.350 13 C 0.509 3.491 14 O -0.495 6.495 15 C -0.110 4.110 16 C -0.027 4.027 17 C -0.063 4.063 18 C -0.072 4.072 19 O -0.545 6.545 20 Si 0.676 3.324 21 C -0.066 4.066 22 Br -0.027 7.027 23 C -0.098 4.098 24 C -0.058 4.058 25 C -0.127 4.127 26 H 0.065 0.935 27 H 0.068 0.932 28 H 0.059 0.941 29 H 0.063 0.937 30 H 0.071 0.929 31 H 0.064 0.936 32 H 0.058 0.942 33 H 0.066 0.934 34 H 0.064 0.936 35 H 0.091 0.909 36 H 0.073 0.927 37 H 0.076 0.924 38 H 0.076 0.924 39 H 0.158 0.842 40 H 0.089 0.911 41 H 0.389 0.611 42 H -0.231 1.231 43 H -0.251 1.251 44 H 0.148 0.852 45 H 0.151 0.849 46 H 0.079 0.921 47 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.702 -2.098 -2.165 3.095 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.236 4.236 2 C 0.065 3.935 3 C -0.196 4.196 4 C -0.234 4.234 5 O -0.280 6.280 6 C 0.005 3.995 7 H 0.111 0.889 8 C -0.187 4.187 9 C -0.130 4.130 10 H 0.124 0.876 11 C 0.007 3.993 12 O -0.267 6.267 13 C 0.353 3.647 14 O -0.384 6.384 15 C -0.112 4.112 16 C -0.046 4.046 17 C -0.065 4.065 18 C -0.181 4.181 19 O -0.351 6.351 20 Si 0.573 3.427 21 C -0.146 4.146 22 Br 0.060 6.940 23 C -0.118 4.118 24 C -0.077 4.077 25 C -0.164 4.164 26 H 0.084 0.916 27 H 0.087 0.913 28 H 0.078 0.922 29 H 0.082 0.918 30 H 0.090 0.910 31 H 0.083 0.917 32 H 0.077 0.923 33 H 0.085 0.915 34 H 0.083 0.917 35 H 0.110 0.890 36 H 0.092 0.908 37 H 0.094 0.906 38 H 0.095 0.905 39 H 0.176 0.824 40 H 0.107 0.893 41 H 0.238 0.762 42 H -0.154 1.154 43 H -0.175 1.175 44 H 0.165 0.835 45 H 0.169 0.831 46 H 0.097 0.903 47 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -0.212 -1.704 -2.831 3.311 hybrid contribution -0.940 0.378 0.030 1.014 sum -1.153 -1.326 -2.801 3.307 Atomic orbital electron populations 1.22469 0.95619 1.02444 1.03107 1.21545 0.93122 0.93275 0.85510 1.21771 1.02038 0.93201 1.02628 1.22471 1.02321 1.00750 0.97826 1.88045 1.73731 1.23343 1.42901 1.23559 0.96993 0.81896 0.97101 0.88920 1.23642 0.99538 0.96544 0.98950 1.22371 0.97964 0.95967 0.96673 0.87601 1.23145 0.97884 0.80470 0.97767 1.86506 1.56821 1.33065 1.50258 1.20973 0.76645 0.85232 0.81827 1.90885 1.55654 1.68296 1.23535 1.19279 1.01433 0.93017 0.97431 1.21117 0.92505 0.91920 0.99026 1.19117 0.97458 0.95583 0.94338 1.24792 1.07293 0.98289 0.87717 1.86398 1.67792 1.60576 1.20373 0.95766 0.77562 0.84979 0.84406 1.21937 1.01229 0.94135 0.97262 1.96786 1.87183 1.19635 1.90428 1.21111 0.96091 0.94644 0.99961 1.21542 0.97338 0.94234 0.94566 1.23233 1.01915 0.94080 0.97186 0.91575 0.91341 0.92233 0.91757 0.91046 0.91741 0.92291 0.91519 0.91676 0.89040 0.90849 0.90558 0.90548 0.82409 0.89305 0.76203 1.15429 1.17546 0.83451 0.83102 0.90260 0.88659 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.13 8.38 37.15 0.31 0.44 16 2 C 0.10 0.02 1.11 -90.62 -0.10 -0.08 16 3 C -0.14 0.02 8.84 37.16 0.33 0.35 16 4 C -0.18 0.10 8.38 37.16 0.31 0.41 16 5 O -0.36 -0.65 10.00 -35.23 -0.35 -1.00 16 6 C 0.06 -0.01 2.82 -25.92 -0.07 -0.08 16 7 H 0.09 -0.10 5.55 -51.93 -0.29 -0.39 16 8 C -0.15 0.04 7.46 -25.92 -0.19 -0.15 16 9 C -0.11 0.08 4.02 -89.80 -0.36 -0.28 16 10 H 0.11 -0.15 8.14 -51.93 -0.42 -0.58 16 11 C 0.08 0.08 5.31 37.16 0.20 0.27 16 12 O -0.35 -0.74 9.47 -40.53 -0.38 -1.13 16 13 C 0.51 1.94 7.90 34.59 0.27 2.22 16 14 O -0.50 -3.23 16.14 -19.25 -0.31 -3.54 16 15 C -0.11 -0.29 5.87 -104.98 -0.62 -0.91 16 16 C -0.03 -0.09 8.91 -39.18 -0.35 -0.43 16 17 C -0.06 -0.13 4.49 -104.66 -0.47 -0.60 16 18 C -0.07 0.00 2.42 36.01 0.09 0.08 16 19 O -0.54 0.03 11.50 -35.23 -0.41 -0.37 16 20 Si 0.68 -0.41 31.34 -169.99 -5.33 -5.74 16 21 C -0.07 -0.09 5.96 -39.40 -0.24 -0.32 16 22 Br -0.03 -0.02 29.85 -68.01 -2.03 -2.05 16 23 C -0.10 -0.02 9.77 -39.62 -0.39 -0.41 16 24 C -0.06 -0.03 9.62 -39.18 -0.38 -0.40 16 25 C -0.13 0.08 7.47 -25.92 -0.19 -0.11 16 26 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 27 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 28 H 0.06 -0.07 6.25 -51.93 -0.32 -0.39 16 29 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 30 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 31 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 32 H 0.06 -0.05 7.02 -51.93 -0.36 -0.41 16 33 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 34 H 0.06 0.00 8.14 -51.92 -0.42 -0.42 16 35 H 0.09 0.07 7.90 -51.93 -0.41 -0.34 16 36 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 37 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 38 H 0.08 0.11 7.84 -51.93 -0.41 -0.30 16 39 H 0.16 0.65 6.74 -52.49 -0.35 0.29 16 40 H 0.09 -0.12 7.13 -51.93 -0.37 -0.49 16 41 H 0.39 -1.95 8.74 45.56 0.40 -1.55 16 42 H -0.23 -0.26 6.33 56.52 0.36 0.10 16 43 H -0.25 -0.76 7.11 56.52 0.40 -0.36 16 44 H 0.15 -0.29 8.06 -52.48 -0.42 -0.71 16 45 H 0.15 -0.23 7.61 -52.48 -0.40 -0.63 16 46 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 47 H 0.09 0.00 8.10 -51.93 -0.42 -0.42 16 LS Contribution 400.96 15.07 6.04 6.04 Total: 0.00 -6.69 400.96 -11.87 -18.56 By element: Atomic # 1 Polarization: -3.52 SS G_CDS: -7.25 Total: -10.77 kcal Atomic # 6 Polarization: 1.84 SS G_CDS: -1.85 Total: -0.01 kcal Atomic # 8 Polarization: -4.59 SS G_CDS: -1.45 Total: -6.04 kcal Atomic # 14 Polarization: -0.41 SS G_CDS: -5.33 Total: -5.74 kcal Atomic # 35 Polarization: -0.02 SS G_CDS: -2.03 Total: -2.05 kcal Total LS contribution 6.04 Total: 6.04 kcal Total: -6.69 -11.87 -18.56 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_13441022_14598394.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -92.794 kcal (2) G-P(sol) polarization free energy of solvation -6.692 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.486 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.868 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.560 kcal (6) G-S(sol) free energy of system = (1) + (5) -111.354 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds