Wall clock time and date at job start Sat Mar 6 2021 04:05:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 C 1.53003 * 109.47180 * 2 1 4 4 C 1.53000 * 109.47118 * 240.00396 * 2 1 3 5 5 O 1.45196 * 109.47234 * 120.00460 * 2 1 3 6 6 C 1.34634 * 117.00108 * 60.00283 * 5 2 1 7 7 O 1.21515 * 120.00113 * 359.97438 * 6 5 2 8 8 N 1.34779 * 120.00432 * 180.02562 * 6 5 2 9 9 C 1.46498 * 120.00479 * 179.97438 * 8 6 5 10 10 H 1.09004 * 112.84643 * 336.19431 * 9 8 6 11 11 C 1.53952 * 113.61128 * 107.46472 * 9 8 6 12 12 C 1.53776 * 87.02249 * 89.20223 * 11 9 8 13 13 H 1.09002 * 113.61338 * 270.76924 * 12 11 9 14 14 C 1.53000 * 113.61740 * 139.94666 * 12 11 9 15 15 O 1.45203 * 109.46840 * 85.86609 * 14 12 11 16 16 C 1.34710 * 117.00057 * 180.02562 * 15 14 12 17 17 O 1.21490 * 120.00041 * 359.97438 * 16 15 14 18 18 C 1.47680 * 120.00426 * 179.97438 * 16 15 14 19 19 C 1.39636 * 120.13997 * 180.02562 * 18 16 15 20 20 C 1.37918 * 119.85714 * 179.97438 * 19 18 16 21 21 C 1.50701 * 119.93145 * 180.02562 * 20 19 18 22 22 O 1.42896 * 109.47283 * 254.98213 * 21 20 19 23 23 Si 1.86303 * 109.46767 * 134.98094 * 21 20 19 24 24 C 1.38470 * 120.13614 * 0.02727 * 20 19 18 25 25 Br 1.89103 * 119.85587 * 180.27267 * 24 20 19 26 26 C 1.38505 * 120.28382 * 359.97438 * 24 20 19 27 27 C 1.37870 * 120.14264 * 359.97438 * 26 24 20 28 28 C 1.53777 * 113.61540 * 204.99829 * 9 8 6 29 29 H 1.08998 * 109.47052 * 299.99645 * 1 2 3 30 30 H 1.09003 * 109.47572 * 59.99452 * 1 2 3 31 31 H 1.08998 * 109.47255 * 179.97438 * 1 2 3 32 32 H 1.08996 * 109.47244 * 179.97438 * 3 2 1 33 33 H 1.08994 * 109.47095 * 300.00515 * 3 2 1 34 34 H 1.09005 * 109.46630 * 60.00885 * 3 2 1 35 35 H 1.08998 * 109.47222 * 300.00222 * 4 2 1 36 36 H 1.09003 * 109.47026 * 60.00152 * 4 2 1 37 37 H 1.09003 * 109.47565 * 179.97438 * 4 2 1 38 38 H 0.97002 * 119.99190 * 359.97438 * 8 6 5 39 39 H 1.09001 * 113.67224 * 334.67069 * 11 9 8 40 40 H 1.09001 * 113.60896 * 203.72228 * 11 9 8 41 41 H 1.08996 * 109.47013 * 325.86625 * 14 12 11 42 42 H 1.09005 * 109.47003 * 205.86195 * 14 12 11 43 43 H 1.07998 * 120.07718 * 359.96053 * 19 18 16 44 44 H 1.09004 * 109.46854 * 14.98515 * 21 20 19 45 45 H 0.96703 * 114.00088 * 300.00325 * 22 21 20 46 46 H 1.48501 * 109.99746 * 180.02562 * 23 21 20 47 47 H 1.48497 * 110.00011 * 301.32006 * 23 21 20 48 48 H 1.08004 * 119.92552 * 179.97438 * 26 24 20 49 49 H 1.08000 * 120.07617 * 180.02562 * 27 26 24 50 50 H 1.08998 * 113.61735 * 156.24621 * 28 9 8 51 51 H 1.09003 * 113.69017 * 25.35878 * 28 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0399 -0.7212 -1.2493 5 8 2.0140 -0.6846 1.1855 6 6 1.6523 -1.9724 1.3381 7 8 0.9509 -2.5095 0.5038 8 7 2.0672 -2.6656 2.4169 9 6 1.6732 -4.0668 2.5833 10 1 0.7589 -4.3161 2.0449 11 6 2.8224 -5.0630 2.3444 12 6 3.1480 -4.9229 3.8407 13 1 3.8458 -4.1153 4.0620 14 6 3.5356 -6.2431 4.5099 15 8 4.9570 -6.4784 4.3290 16 6 5.4627 -7.6074 4.8620 17 8 4.7362 -8.3744 5.4620 18 6 6.9003 -7.9130 4.7170 19 6 7.4274 -9.0828 5.2679 20 6 8.7707 -9.3627 5.1286 21 6 9.3412 -10.6250 5.7220 22 8 10.0849 -10.3042 6.8992 23 14 10.4652 -11.4418 4.4807 24 6 9.5961 -8.4863 4.4446 25 35 11.4353 -8.8817 4.2516 26 6 9.0793 -7.3243 3.8959 27 6 7.7381 -7.0335 4.0273 28 6 1.6737 -4.5371 4.0474 29 1 -0.3633 0.5138 0.8900 30 1 -0.3634 0.5139 -0.8899 31 1 -0.3633 -1.0276 -0.0005 32 1 3.1299 1.4425 0.0005 33 1 1.6766 1.9564 -0.8899 34 1 1.6767 1.9563 0.8901 35 1 1.6766 -1.7488 -1.2494 36 1 1.6766 -0.2072 -2.1393 37 1 3.1300 -0.7208 -1.2496 38 1 2.6268 -2.2367 3.0831 39 1 3.6049 -4.6797 1.6895 40 1 2.4842 -6.0602 2.0626 41 1 2.9718 -7.0589 4.0576 42 1 3.3086 -6.1910 5.5748 43 1 6.7847 -9.7669 5.8022 44 1 8.5290 -11.3050 5.9792 45 1 10.8252 -9.7015 6.7448 46 1 11.0339 -12.6882 5.0536 47 1 9.7112 -11.7517 3.2395 48 1 9.7285 -6.6445 3.3639 49 1 7.3362 -6.1273 3.5987 50 1 1.0209 -5.3902 4.2322 51 1 1.5301 -3.7307 4.7665 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_13441022_15734084.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 04:05:56 Heat of formation + Delta-G solvation = -144.697434 kcal Electronic energy + Delta-G solvation = -34187.057844 eV Core-core repulsion = 29293.424904 eV Total energy + Delta-G solvation = -4893.632940 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 442.092 amu Computer time = 1.53 seconds Orbital eigenvalues (eV) -42.03945 -41.83806 -40.75452 -40.21116 -38.08745 -37.82231 -37.45765 -35.36938 -34.30670 -34.05298 -32.99621 -31.41996 -29.66144 -28.37424 -28.30387 -27.05227 -26.76228 -25.65905 -24.37029 -23.43980 -23.09696 -21.84102 -21.16911 -20.32037 -19.34783 -19.30949 -18.41705 -17.93785 -17.63821 -17.60132 -17.20698 -17.14196 -17.00227 -16.58330 -16.35530 -15.87172 -15.57788 -15.41510 -15.30256 -15.18715 -15.10721 -14.73983 -14.52285 -14.45234 -14.30055 -13.75024 -13.66918 -13.41718 -13.37045 -13.30527 -13.09788 -13.02602 -12.92381 -12.87133 -12.79002 -12.53270 -12.38338 -12.33962 -12.16037 -12.13351 -12.08840 -11.96723 -11.86862 -11.57564 -11.40222 -11.21927 -11.13076 -10.75542 -10.26126 -10.20209 -10.09698 -4.82252 -0.85905 -0.07914 -0.03529 0.99777 1.11586 1.16463 1.37555 1.44942 1.71630 1.88189 2.32581 3.09671 3.18236 3.27776 3.37870 3.39834 3.45392 3.51291 3.73479 3.74481 3.80018 3.81957 3.86004 3.93936 3.95250 4.14385 4.18315 4.30543 4.34191 4.39374 4.46927 4.60482 4.60708 4.61101 4.72227 4.73421 4.76177 4.76604 4.82315 4.83236 4.87426 4.88689 4.93759 4.99799 5.01848 5.05347 5.14755 5.23382 5.26534 5.31707 5.36387 5.46963 5.60744 6.37157 6.42596 6.48872 7.32424 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C 0.128 3.872 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.368 6.368 6 C 0.646 3.354 7 O -0.594 6.594 8 N -0.682 5.682 9 C 0.131 3.869 10 H 0.094 0.906 11 C -0.145 4.145 12 C -0.100 4.100 13 H 0.116 0.884 14 C 0.073 3.927 15 O -0.342 6.342 16 C 0.511 3.489 17 O -0.532 6.532 18 C -0.116 4.116 19 C -0.045 4.045 20 C -0.102 4.102 21 C -0.061 4.061 22 O -0.541 6.541 23 Si 0.581 3.419 24 C -0.071 4.071 25 Br 0.101 6.899 26 C -0.080 4.080 27 C -0.042 4.042 28 C -0.122 4.122 29 H 0.062 0.938 30 H 0.086 0.914 31 H 0.063 0.937 32 H 0.070 0.930 33 H 0.098 0.902 34 H 0.069 0.931 35 H 0.063 0.937 36 H 0.086 0.914 37 H 0.063 0.937 38 H 0.418 0.582 39 H 0.071 0.929 40 H 0.097 0.903 41 H 0.074 0.926 42 H 0.077 0.923 43 H 0.139 0.861 44 H 0.112 0.888 45 H 0.385 0.615 46 H -0.267 1.267 47 H -0.274 1.274 48 H 0.184 0.816 49 H 0.177 0.823 50 H 0.112 0.888 51 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.584 8.335 -1.233 9.156 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.283 6.283 6 C 0.400 3.600 7 O -0.484 6.484 8 N -0.342 5.342 9 C 0.027 3.973 10 H 0.112 0.888 11 C -0.184 4.184 12 C -0.118 4.118 13 H 0.134 0.866 14 C -0.001 4.001 15 O -0.258 6.258 16 C 0.357 3.643 17 O -0.423 6.423 18 C -0.118 4.118 19 C -0.064 4.064 20 C -0.104 4.104 21 C -0.172 4.172 22 O -0.349 6.349 23 Si 0.483 3.517 24 C -0.150 4.150 25 Br 0.187 6.813 26 C -0.099 4.099 27 C -0.061 4.061 28 C -0.160 4.160 29 H 0.081 0.919 30 H 0.105 0.895 31 H 0.082 0.918 32 H 0.089 0.911 33 H 0.116 0.884 34 H 0.088 0.912 35 H 0.082 0.918 36 H 0.105 0.895 37 H 0.082 0.918 38 H 0.255 0.745 39 H 0.089 0.911 40 H 0.116 0.884 41 H 0.092 0.908 42 H 0.096 0.904 43 H 0.157 0.843 44 H 0.130 0.870 45 H 0.235 0.765 46 H -0.192 1.192 47 H -0.200 1.200 48 H 0.202 0.798 49 H 0.194 0.806 50 H 0.131 0.869 51 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 3.397 6.704 -1.810 7.730 hybrid contribution -1.217 -0.540 0.665 1.488 sum 2.180 6.164 -1.144 6.637 Atomic orbital electron populations 1.22478 0.94108 1.03678 1.03520 1.22350 0.94409 0.92596 0.81499 1.21892 1.02519 0.90823 1.04237 1.22473 1.01697 1.02212 0.97338 1.86308 1.71484 1.23192 1.47270 1.18322 0.78541 0.80733 0.82452 1.90914 1.42235 1.71072 1.44219 1.44338 1.54961 1.11746 1.23122 1.21841 0.98644 0.78248 0.98607 0.88758 1.23589 0.98345 1.00085 0.96355 1.22671 0.97769 0.95986 0.95412 0.86617 1.23355 0.76201 0.98472 1.02028 1.86509 1.28859 1.39745 1.70730 1.21247 0.88875 0.79086 0.75121 1.90874 1.61510 1.49443 1.40516 1.19331 0.90160 0.97814 1.04459 1.21107 0.93940 0.95500 0.95843 1.20059 0.93734 0.97408 0.99176 1.24852 1.00564 0.96533 0.95210 1.86532 1.47321 1.70124 1.30902 0.93179 0.91441 0.89421 0.77641 1.22131 0.90648 0.99057 1.03168 1.96355 1.07166 1.81179 1.96627 1.21514 0.95864 0.94799 0.97711 1.21835 0.92261 0.98746 0.93269 1.23333 0.94955 1.02789 0.94936 0.91903 0.89532 0.91810 0.91072 0.88384 0.91161 0.91826 0.89548 0.91827 0.74482 0.91054 0.88431 0.90782 0.90425 0.84312 0.86983 0.76507 1.19247 1.19975 0.79825 0.80580 0.86924 0.88582 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.43 8.37 71.98 0.60 0.18 16 2 C 0.13 0.23 1.13 -10.79 -0.01 0.22 16 3 C -0.14 0.44 8.85 71.98 0.64 1.08 16 4 C -0.18 -0.39 8.37 71.98 0.60 0.21 16 5 O -0.37 -1.44 9.94 -55.43 -0.55 -1.99 16 6 C 0.65 3.28 8.06 129.79 1.05 4.33 16 7 O -0.59 -6.44 11.48 19.79 0.23 -6.21 16 8 N -0.68 1.22 5.27 -567.33 -2.99 -1.77 16 9 C 0.13 -0.43 4.33 45.58 0.20 -0.23 16 10 H 0.09 0.06 7.46 -2.38 -0.02 0.05 16 11 C -0.15 0.65 7.44 31.18 0.23 0.88 16 12 C -0.10 0.72 3.89 -10.27 -0.04 0.68 16 13 H 0.12 -1.03 8.14 -2.39 -0.02 -1.05 16 14 C 0.07 -0.23 5.30 71.98 0.38 0.15 16 15 O -0.34 0.20 9.47 -56.20 -0.53 -0.33 16 16 C 0.51 1.87 7.90 70.32 0.56 2.42 16 17 O -0.53 -5.40 16.14 19.87 0.32 -5.08 16 18 C -0.12 -0.06 5.87 -20.10 -0.12 -0.18 16 19 C -0.04 -0.11 9.21 22.53 0.21 0.09 16 20 C -0.10 -0.09 4.77 -19.88 -0.09 -0.19 16 21 C -0.06 -0.20 2.79 71.24 0.20 0.00 16 22 O -0.54 -2.03 12.88 -148.98 -1.92 -3.95 16 23 Si 0.58 2.52 26.91 68.60 1.85 4.37 16 24 C -0.07 0.26 5.79 22.39 0.13 0.39 16 25 Br 0.10 -0.65 26.02 -20.37 -0.53 -1.18 16 26 C -0.08 0.61 9.77 22.25 0.22 0.82 16 27 C -0.04 0.24 9.62 22.53 0.22 0.46 16 28 C -0.12 0.99 7.39 31.12 0.23 1.22 16 29 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 30 H 0.09 -0.08 8.14 -2.39 -0.02 -0.10 16 31 H 0.06 0.49 5.88 -2.39 -0.01 0.48 16 32 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 33 H 0.10 -0.61 8.14 -2.39 -0.02 -0.63 16 34 H 0.07 -0.24 8.14 -2.38 -0.02 -0.26 16 35 H 0.06 0.48 5.88 -2.39 -0.01 0.47 16 36 H 0.09 -0.09 8.14 -2.39 -0.02 -0.11 16 37 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 38 H 0.42 -2.73 8.81 -92.71 -0.82 -3.55 16 39 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 40 H 0.10 -0.44 7.92 -2.39 -0.02 -0.46 16 41 H 0.07 -0.17 7.87 -2.39 -0.02 -0.19 16 42 H 0.08 -0.23 8.14 -2.38 -0.02 -0.25 16 43 H 0.14 0.57 7.59 -2.91 -0.02 0.55 16 44 H 0.11 0.45 7.77 -2.38 -0.02 0.43 16 45 H 0.39 -1.11 7.31 -74.06 -0.54 -1.65 16 46 H -0.27 -2.96 7.11 99.48 0.71 -2.25 16 47 H -0.27 -2.70 7.11 99.48 0.71 -1.99 16 48 H 0.18 -2.59 8.06 -2.91 -0.02 -2.61 16 49 H 0.18 -1.84 7.61 -2.91 -0.02 -1.86 16 50 H 0.11 -1.05 8.10 -2.39 -0.02 -1.07 16 51 H 0.10 -0.94 8.14 -2.39 -0.02 -0.96 16 Total: 0.00 -21.70 430.99 0.71 -20.99 By element: Atomic # 1 Polarization: -17.01 SS G_CDS: -0.35 Total: -17.36 kcal Atomic # 6 Polarization: 7.35 SS G_CDS: 5.19 Total: 12.54 kcal Atomic # 7 Polarization: 1.22 SS G_CDS: -2.99 Total: -1.77 kcal Atomic # 8 Polarization: -15.12 SS G_CDS: -2.45 Total: -17.57 kcal Atomic # 14 Polarization: 2.52 SS G_CDS: 1.85 Total: 4.37 kcal Atomic # 35 Polarization: -0.65 SS G_CDS: -0.53 Total: -1.18 kcal Total: -21.70 0.71 -20.99 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_13441022_15734084.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -123.712 kcal (2) G-P(sol) polarization free energy of solvation -21.700 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -145.412 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.715 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.985 kcal (6) G-S(sol) free energy of system = (1) + (5) -144.697 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.53 seconds