Wall clock time and date at job start Sat Mar 6 2021 04:06:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52999 * 109.47568 * 2 1 4 4 C 1.52998 * 109.47411 * 239.99620 * 2 1 3 5 5 O 1.45209 * 109.47094 * 120.00118 * 2 1 3 6 6 C 1.34631 * 116.99862 * 59.99796 * 5 2 1 7 7 O 1.21507 * 120.00308 * 359.97438 * 6 5 2 8 8 N 1.34783 * 119.99708 * 180.27965 * 6 5 2 9 9 C 1.46501 * 120.00076 * 179.72641 * 8 6 5 10 10 H 1.09008 * 112.84340 * 336.18974 * 9 8 6 11 11 C 1.53777 * 113.61742 * 107.49876 * 9 8 6 12 12 C 1.53785 * 87.07985 * 139.98246 * 11 9 8 13 13 H 1.08997 * 113.68738 * 89.12631 * 12 11 9 14 14 C 1.53003 * 113.61067 * 220.01829 * 12 11 9 15 15 O 1.45195 * 109.47167 * 272.49832 * 14 12 11 16 16 C 1.34726 * 116.99925 * 180.02562 * 15 14 12 17 17 O 1.21470 * 119.99720 * 0.02562 * 16 15 14 18 18 C 1.47678 * 119.99800 * 179.97438 * 16 15 14 19 19 C 1.39632 * 120.13574 * 179.72095 * 18 16 15 20 20 C 1.37919 * 119.85625 * 179.76927 * 19 18 16 21 21 C 1.50703 * 119.93171 * 180.25621 * 20 19 18 22 22 O 1.42904 * 109.46913 * 16.35796 * 21 20 19 23 23 Si 1.86298 * 109.46857 * 256.36359 * 21 20 19 24 24 C 1.38457 * 120.13804 * 0.51047 * 20 19 18 25 25 Br 1.89105 * 119.85834 * 179.76604 * 24 20 19 26 26 C 1.38505 * 120.28575 * 359.74262 * 24 20 19 27 27 C 1.37878 * 120.13703 * 0.02562 * 26 24 20 28 28 C 1.53776 * 113.61481 * 205.00124 * 9 8 6 29 29 H 1.08997 * 109.46841 * 300.00424 * 1 2 3 30 30 H 1.09004 * 109.46785 * 60.00129 * 1 2 3 31 31 H 1.08996 * 109.47270 * 179.97438 * 1 2 3 32 32 H 1.08999 * 109.47299 * 179.97438 * 3 2 1 33 33 H 1.09004 * 109.46962 * 299.99762 * 3 2 1 34 34 H 1.09004 * 109.47193 * 59.99619 * 3 2 1 35 35 H 1.08996 * 109.47299 * 300.00466 * 4 2 1 36 36 H 1.09004 * 109.46942 * 60.00347 * 4 2 1 37 37 H 1.08999 * 109.47352 * 180.02562 * 4 2 1 38 38 H 0.96994 * 119.99954 * 359.72068 * 8 6 5 39 39 H 1.09001 * 113.61562 * 254.53297 * 11 9 8 40 40 H 1.08998 * 113.61587 * 25.43132 * 11 9 8 41 41 H 1.09003 * 109.47084 * 32.50192 * 14 12 11 42 42 H 1.09003 * 109.46443 * 152.49350 * 14 12 11 43 43 H 1.08010 * 120.07079 * 0.02562 * 19 18 16 44 44 H 1.08991 * 109.47227 * 136.35689 * 21 20 19 45 45 H 0.96702 * 114.00019 * 180.02562 * 22 21 20 46 46 H 1.48497 * 109.99963 * 305.39525 * 23 21 20 47 47 H 1.48500 * 110.00168 * 66.71663 * 23 21 20 48 48 H 1.07997 * 119.93420 * 180.02562 * 26 24 20 49 49 H 1.08006 * 120.06878 * 179.97438 * 27 26 24 50 50 H 1.09006 * 113.61477 * 334.55918 * 28 9 8 51 51 H 1.08995 * 113.61901 * 105.46388 * 28 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0140 -0.6845 1.1856 6 6 1.6522 -1.9723 1.3383 7 8 0.9508 -2.5094 0.5041 8 7 2.0629 -2.6639 2.4198 9 6 1.6643 -4.0635 2.5891 10 1 0.7502 -4.3114 2.0495 11 6 2.8097 -5.0628 2.3562 12 6 2.2559 -5.8557 3.5518 13 1 1.5042 -6.5953 3.2763 14 6 3.3428 -6.4250 4.4659 15 8 3.7566 -7.7267 3.9733 16 6 4.7140 -8.3685 4.6708 17 8 5.1897 -7.8549 5.6634 18 6 5.1843 -9.6969 4.2290 19 6 6.1806 -10.3621 4.9464 20 6 6.6121 -11.6046 4.5314 21 6 7.6832 -12.3266 5.3077 22 8 7.8177 -11.7317 6.6000 23 14 9.3025 -12.2016 4.3950 24 6 6.0670 -12.1877 3.4001 25 35 6.6692 -13.8887 2.8344 26 6 5.0822 -11.5307 2.6811 27 6 4.6388 -10.2903 3.0883 28 6 1.6604 -4.5299 4.0544 29 1 -0.3633 0.5139 0.8899 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3633 -1.0276 -0.0005 32 1 3.1301 1.4424 0.0005 33 1 1.6768 1.9563 -0.8900 34 1 1.6767 1.9564 0.8900 35 1 1.6767 -1.7489 -1.2492 36 1 1.6767 -0.2075 -2.1392 37 1 3.1300 -0.7217 -1.2489 38 1 2.6225 -2.2351 3.0860 39 1 2.7382 -5.5957 1.4080 40 1 3.7994 -4.6414 2.5323 41 1 4.1994 -5.7510 4.4753 42 1 2.9498 -6.5273 5.4774 43 1 6.6094 -9.9064 5.8267 44 1 7.4078 -13.3754 5.4174 45 1 8.4915 -12.1466 7.1558 46 1 9.1415 -12.6980 3.0047 47 1 9.7698 -10.7922 4.3802 48 1 4.6606 -11.9910 1.7997 49 1 3.8711 -9.7788 2.5266 50 1 2.3360 -3.9629 4.6950 51 1 0.6611 -4.6327 4.4773 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_13441022_15734238.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 04:06:01 Heat of formation + Delta-G solvation = -138.085247 kcal Electronic energy + Delta-G solvation = -34020.844960 eV Core-core repulsion = 29127.498747 eV Total energy + Delta-G solvation = -4893.346214 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 442.092 amu Computer time = 1.44 seconds Orbital eigenvalues (eV) -42.03167 -41.84691 -40.69122 -40.14965 -38.11543 -37.73610 -37.49682 -35.43871 -34.34268 -34.09528 -32.84262 -31.12624 -29.66604 -28.39953 -28.33369 -27.12815 -26.79291 -25.63155 -24.52385 -23.14333 -22.51546 -21.87570 -21.43229 -20.56509 -19.20884 -18.93632 -18.72847 -18.27310 -17.75001 -17.65723 -17.21343 -17.11220 -16.66369 -16.49163 -16.30151 -16.07269 -15.88093 -15.57138 -15.43437 -15.09999 -14.93165 -14.65301 -14.42832 -14.31104 -14.21226 -13.70124 -13.53389 -13.39611 -13.38577 -13.25507 -13.05981 -12.93735 -12.90777 -12.89930 -12.70849 -12.57438 -12.50879 -12.44836 -12.30129 -12.06947 -11.90855 -11.77625 -11.63869 -11.42770 -11.32926 -11.27741 -11.13836 -11.00698 -10.19593 -10.18080 -9.76478 -5.09847 -0.86450 -0.09970 0.22831 1.03531 1.11522 1.29016 1.37424 1.60374 1.69753 1.95227 2.32907 2.98066 3.09275 3.25315 3.35344 3.35835 3.49403 3.62822 3.69650 3.71126 3.76628 3.77397 3.89918 3.91303 4.06315 4.11842 4.13583 4.19943 4.28488 4.38532 4.47261 4.58036 4.58346 4.62988 4.65988 4.71929 4.73259 4.74290 4.77189 4.82792 4.84445 4.86721 4.91245 4.93986 4.99096 5.04002 5.12817 5.19695 5.23914 5.29263 5.33754 5.46107 5.56162 6.35934 6.45269 6.77992 7.30128 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.371 6.371 6 C 0.643 3.357 7 O -0.594 6.594 8 N -0.691 5.691 9 C 0.136 3.864 10 H 0.110 0.890 11 C -0.147 4.147 12 C -0.098 4.098 13 H 0.117 0.883 14 C 0.075 3.925 15 O -0.344 6.344 16 C 0.513 3.487 17 O -0.530 6.530 18 C -0.125 4.125 19 C -0.044 4.044 20 C -0.077 4.077 21 C -0.077 4.077 22 O -0.562 6.562 23 Si 0.756 3.244 24 C -0.074 4.074 25 Br -0.019 7.019 26 C -0.095 4.095 27 C -0.050 4.050 28 C -0.122 4.122 29 H 0.062 0.938 30 H 0.087 0.913 31 H 0.064 0.936 32 H 0.068 0.932 33 H 0.098 0.902 34 H 0.069 0.931 35 H 0.063 0.937 36 H 0.087 0.913 37 H 0.060 0.940 38 H 0.417 0.583 39 H 0.072 0.928 40 H 0.089 0.911 41 H 0.074 0.926 42 H 0.079 0.921 43 H 0.141 0.859 44 H 0.106 0.894 45 H 0.409 0.591 46 H -0.250 1.250 47 H -0.306 1.306 48 H 0.172 0.828 49 H 0.173 0.827 50 H 0.106 0.894 51 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.998 -1.658 0.520 2.004 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.090 3.910 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.285 6.285 6 C 0.397 3.603 7 O -0.485 6.485 8 N -0.350 5.350 9 C 0.032 3.968 10 H 0.128 0.872 11 C -0.186 4.186 12 C -0.117 4.117 13 H 0.136 0.864 14 C 0.002 3.998 15 O -0.260 6.260 16 C 0.358 3.642 17 O -0.421 6.421 18 C -0.126 4.126 19 C -0.063 4.063 20 C -0.079 4.079 21 C -0.186 4.186 22 O -0.372 6.372 23 Si 0.657 3.343 24 C -0.154 4.154 25 Br 0.067 6.933 26 C -0.114 4.114 27 C -0.068 4.068 28 C -0.160 4.160 29 H 0.081 0.919 30 H 0.105 0.895 31 H 0.083 0.917 32 H 0.087 0.913 33 H 0.117 0.883 34 H 0.088 0.912 35 H 0.082 0.918 36 H 0.106 0.894 37 H 0.079 0.921 38 H 0.254 0.746 39 H 0.091 0.909 40 H 0.108 0.892 41 H 0.093 0.907 42 H 0.098 0.902 43 H 0.159 0.841 44 H 0.123 0.877 45 H 0.261 0.739 46 H -0.175 1.175 47 H -0.233 1.233 48 H 0.190 0.810 49 H 0.191 0.809 50 H 0.124 0.876 51 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges 0.929 -1.580 -0.774 1.990 hybrid contribution -0.357 0.889 0.622 1.142 sum 0.572 -0.691 -0.153 0.909 Atomic orbital electron populations 1.22469 0.93944 1.03727 1.03536 1.22357 0.94533 0.92567 0.81505 1.21893 1.02407 0.90920 1.04271 1.22470 1.01557 1.02274 0.97400 1.86315 1.71577 1.23362 1.47272 1.18429 0.78547 0.80695 0.82657 1.90899 1.42253 1.71024 1.44290 1.44786 1.54867 1.12532 1.22809 1.22554 0.98855 0.77098 0.98250 0.87197 1.23627 0.99010 0.96808 0.99145 1.22338 0.97175 0.96534 0.95650 0.86443 1.23318 0.97915 0.79928 0.98638 1.86517 1.51589 1.34140 1.53799 1.21182 0.76889 0.85552 0.80549 1.90857 1.56622 1.67846 1.26742 1.19350 1.00921 0.92906 0.99451 1.21049 0.93774 0.92995 0.98500 1.19387 0.97448 0.95336 0.95779 1.24927 1.05073 0.98729 0.89843 1.86370 1.64225 1.61254 1.25352 0.94965 0.77014 0.80882 0.81421 1.22121 1.00707 0.94543 0.98026 1.96790 1.88073 1.19148 1.89252 1.21449 0.94963 0.94554 1.00420 1.21773 0.97728 0.94002 0.93340 1.23366 1.03542 0.94073 0.95013 0.91909 0.89462 0.91732 0.91269 0.88290 0.91158 0.91761 0.89441 0.92069 0.74603 0.90875 0.89207 0.90726 0.90238 0.84128 0.87675 0.73913 1.17461 1.23349 0.81037 0.80936 0.87579 0.88431 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.59 8.37 71.98 0.60 0.01 16 2 C 0.13 0.41 1.13 -10.80 -0.01 0.40 16 3 C -0.14 0.24 8.85 71.98 0.64 0.88 16 4 C -0.18 -0.65 8.37 71.98 0.60 -0.04 16 5 O -0.37 -2.12 9.94 -55.41 -0.55 -2.67 16 6 C 0.64 4.28 8.06 129.79 1.05 5.33 16 7 O -0.59 -7.05 11.48 19.82 0.23 -6.82 16 8 N -0.69 -0.01 5.36 -567.61 -3.04 -3.05 16 9 C 0.14 -0.29 4.24 45.51 0.19 -0.09 16 10 H 0.11 0.11 7.46 -2.38 -0.02 0.09 16 11 C -0.15 0.40 7.43 31.12 0.23 0.63 16 12 C -0.10 0.47 4.02 -10.27 -0.04 0.43 16 13 H 0.12 -0.67 8.14 -2.39 -0.02 -0.69 16 14 C 0.08 -0.07 5.31 71.98 0.38 0.31 16 15 O -0.34 -0.95 9.47 -56.36 -0.53 -1.48 16 16 C 0.51 3.78 7.90 70.32 0.56 4.33 16 17 O -0.53 -7.00 16.14 19.93 0.32 -6.68 16 18 C -0.12 -0.67 5.87 -20.10 -0.12 -0.79 16 19 C -0.04 -0.32 8.91 22.53 0.20 -0.12 16 20 C -0.08 -0.34 4.49 -19.89 -0.09 -0.43 16 21 C -0.08 0.00 2.43 71.24 0.17 0.18 16 22 O -0.56 -0.06 11.50 -148.98 -1.71 -1.78 16 23 Si 0.76 -0.76 31.32 68.60 2.15 1.39 16 24 C -0.07 -0.16 5.96 22.39 0.13 -0.02 16 25 Br -0.02 -0.01 29.79 -20.37 -0.61 -0.61 16 26 C -0.09 0.08 9.77 22.25 0.22 0.29 16 27 C -0.05 0.00 9.62 22.53 0.22 0.22 16 28 C -0.12 0.83 7.39 31.12 0.23 1.06 16 29 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 30 H 0.09 -0.01 8.14 -2.38 -0.02 -0.03 16 31 H 0.06 0.55 5.88 -2.39 -0.01 0.53 16 32 H 0.07 -0.13 8.14 -2.39 -0.02 -0.14 16 33 H 0.10 -0.50 8.14 -2.38 -0.02 -0.52 16 34 H 0.07 -0.14 8.14 -2.38 -0.02 -0.16 16 35 H 0.06 0.57 5.88 -2.39 -0.01 0.55 16 36 H 0.09 0.01 8.14 -2.38 -0.02 -0.01 16 37 H 0.06 0.19 8.14 -2.39 -0.02 0.17 16 38 H 0.42 -1.83 8.84 -92.71 -0.82 -2.65 16 39 H 0.07 -0.06 8.14 -2.39 -0.02 -0.08 16 40 H 0.09 -0.24 7.90 -2.39 -0.02 -0.26 16 41 H 0.07 -0.04 7.84 -2.39 -0.02 -0.06 16 42 H 0.08 -0.08 8.14 -2.39 -0.02 -0.10 16 43 H 0.14 1.43 6.74 -2.91 -0.02 1.41 16 44 H 0.11 -0.37 7.15 -2.39 -0.02 -0.39 16 45 H 0.41 -4.22 8.74 -74.06 -0.65 -4.87 16 46 H -0.25 -0.50 6.29 99.48 0.63 0.12 16 47 H -0.31 -2.44 7.11 99.48 0.71 -1.74 16 48 H 0.17 -1.03 8.06 -2.91 -0.02 -1.05 16 49 H 0.17 -0.83 7.61 -2.91 -0.02 -0.86 16 50 H 0.11 -0.94 8.08 -2.38 -0.02 -0.96 16 51 H 0.10 -0.79 8.14 -2.39 -0.02 -0.81 16 Total: 0.00 -22.39 436.25 0.88 -21.51 By element: Atomic # 1 Polarization: -11.83 SS G_CDS: -0.53 Total: -12.37 kcal Atomic # 6 Polarization: 7.41 SS G_CDS: 5.16 Total: 12.57 kcal Atomic # 7 Polarization: -0.01 SS G_CDS: -3.04 Total: -3.05 kcal Atomic # 8 Polarization: -17.18 SS G_CDS: -2.25 Total: -19.43 kcal Atomic # 14 Polarization: -0.76 SS G_CDS: 2.15 Total: 1.39 kcal Atomic # 35 Polarization: -0.01 SS G_CDS: -0.61 Total: -0.61 kcal Total: -22.39 0.88 -21.51 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_13441022_15734238.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -116.575 kcal (2) G-P(sol) polarization free energy of solvation -22.389 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -138.963 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.878 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.510 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.085 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.45 seconds