Wall clock time and date at job start Sat Mar 6 2021 04:31:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86302 * 109.46892 * 2 1 4 4 C 1.50701 * 109.47061 * 119.99670 * 2 1 3 5 5 C 1.37871 * 119.92999 * 15.28305 * 4 2 1 6 6 C 1.39685 * 119.85837 * 180.27136 * 5 4 2 7 7 C 1.47677 * 120.14015 * 179.74561 * 6 5 4 8 8 O 1.21476 * 119.99545 * 359.72177 * 7 6 5 9 9 O 1.34712 * 119.99833 * 179.72196 * 7 6 5 10 10 C 1.45201 * 117.00064 * 179.97438 * 9 7 6 11 11 C 1.53001 * 109.47313 * 179.97438 * 10 9 7 12 12 H 1.09001 * 109.46652 * 55.00609 * 11 10 9 13 13 C 1.53000 * 109.46886 * 175.00264 * 11 10 9 14 14 C 1.52997 * 109.47060 * 180.02562 * 13 11 10 15 15 C 1.53006 * 109.47127 * 300.00449 * 14 13 11 16 16 H 1.09001 * 109.47002 * 299.99574 * 15 14 13 17 17 O 1.42900 * 109.46976 * 179.97438 * 15 14 13 18 18 C 1.52997 * 109.47164 * 59.99836 * 15 14 13 19 19 C 1.52996 * 109.47302 * 295.00482 * 11 10 9 20 20 C 1.39645 * 119.71974 * 359.47346 * 6 5 4 21 21 C 1.37909 * 119.85679 * 0.24591 * 20 6 5 22 22 C 1.38466 * 120.14270 * 0.02562 * 21 20 6 23 23 Br 1.89099 * 119.86008 * 179.97438 * 22 21 20 24 24 H 0.96704 * 114.00469 * 299.99759 * 1 2 3 25 25 H 1.08992 * 109.47526 * 240.00128 * 2 1 3 26 26 H 1.48499 * 110.00081 * 299.99759 * 3 2 1 27 27 H 1.48504 * 110.00077 * 61.31735 * 3 2 1 28 28 H 1.08000 * 120.07247 * 359.97438 * 5 4 2 29 29 H 1.09002 * 109.46606 * 60.00282 * 10 9 7 30 30 H 1.08994 * 109.47375 * 300.00905 * 10 9 7 31 31 H 1.09002 * 109.47398 * 300.00496 * 13 11 10 32 32 H 1.09001 * 109.47194 * 60.00677 * 13 11 10 33 33 H 1.08998 * 109.47533 * 59.99948 * 14 13 11 34 34 H 1.08996 * 109.47853 * 180.02562 * 14 13 11 35 35 H 0.96708 * 114.00004 * 59.99909 * 17 15 14 36 36 H 1.09002 * 109.47045 * 180.02562 * 18 15 14 37 37 H 1.09001 * 109.47375 * 59.99966 * 18 15 14 38 38 H 1.08992 * 109.47554 * 299.99692 * 19 11 10 39 39 H 1.09004 * 109.47108 * 59.99942 * 19 11 10 40 40 H 1.07996 * 120.06934 * 180.27209 * 20 6 5 41 41 H 1.08002 * 119.92965 * 179.97438 * 21 20 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 1.0740 -1.4994 1.9675 6 6 1.5397 -2.1526 3.1110 7 6 0.6253 -2.9948 3.9081 8 8 -0.5358 -3.1166 3.5726 9 8 1.0789 -3.6280 5.0073 10 6 0.1243 -4.4383 5.7424 11 6 0.8175 -5.0741 6.9491 12 1 1.2824 -4.2950 7.5532 13 6 -0.2144 -5.8258 7.7923 14 6 0.4786 -6.4612 8.9993 15 6 1.5515 -7.4388 8.5153 16 1 1.0869 -8.2182 7.9112 17 8 2.1992 -8.0317 9.6426 18 6 2.5833 -6.6870 7.6720 19 6 1.8899 -6.0518 6.4645 20 6 2.8751 -2.0104 3.4940 21 6 3.7240 -1.2229 2.7450 22 6 3.2548 -0.5735 1.6157 23 35 4.4256 0.5049 0.5949 24 1 -0.3934 0.4417 0.7651 25 1 1.7924 -0.5138 -0.8899 26 1 1.5615 2.4679 -1.2085 27 1 1.5878 2.4586 1.2242 28 1 0.0432 -1.6084 1.6640 29 1 -0.2637 -5.2222 5.0920 30 1 -0.6981 -3.8101 6.0846 31 1 -0.9785 -5.1293 8.1375 32 1 -0.6793 -6.6050 7.1882 33 1 0.9432 -5.6819 9.6034 34 1 -0.2563 -6.9971 9.5999 35 1 1.6041 -8.5256 10.2233 36 1 3.3474 -7.3835 7.3268 37 1 3.0479 -5.9076 8.2760 38 1 1.4251 -6.8309 5.8604 39 1 2.6251 -5.5163 5.8637 40 1 3.2422 -2.5164 4.3746 41 1 4.7569 -1.1118 3.0404 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_13441022_16737258.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 04:31:42 Heat of formation + Delta-G solvation = -157.703919 kcal Electronic energy + Delta-G solvation = -25162.537649 eV Core-core repulsion = 21247.287806 eV Total energy + Delta-G solvation = -3915.249843 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.050 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -41.93118 -40.69133 -39.97588 -37.98599 -37.80858 -36.57431 -34.40368 -32.69033 -32.07606 -31.78306 -31.11154 -27.49741 -26.74183 -25.05271 -23.76357 -23.14559 -22.34275 -21.84257 -20.86337 -19.39754 -18.40001 -18.21236 -17.97162 -17.61799 -17.09650 -16.88484 -16.46284 -16.35639 -15.61770 -15.50658 -15.30211 -15.17633 -14.94920 -14.59191 -14.35214 -14.18470 -13.94129 -13.77509 -13.29745 -13.27221 -13.14655 -12.91774 -12.75832 -12.53825 -12.37225 -12.15074 -12.11970 -12.01077 -12.00158 -11.93141 -11.65810 -11.49036 -11.09875 -10.95740 -10.70836 -10.20991 -9.89868 -4.72367 -0.82494 -0.04548 0.06213 1.01836 1.23150 1.37300 1.44254 1.89800 2.38202 3.09538 3.19784 3.24725 3.39422 3.57124 3.58341 3.67546 3.85580 3.93976 3.96816 4.00210 4.17457 4.19991 4.25078 4.31538 4.37506 4.40060 4.47065 4.49193 4.53937 4.66677 4.79900 4.81411 4.85196 4.96426 5.00246 5.05375 5.08011 5.15382 5.19492 5.22837 5.31469 5.39602 5.44928 6.31199 6.49032 6.86905 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.062 4.062 3 Si 0.588 3.412 4 C -0.098 4.098 5 C -0.053 4.053 6 C -0.114 4.114 7 C 0.510 3.490 8 O -0.532 6.532 9 O -0.342 6.342 10 C 0.070 3.930 11 C -0.081 4.081 12 H 0.087 0.913 13 C -0.110 4.110 14 C -0.144 4.144 15 C 0.099 3.901 16 H 0.059 0.941 17 O -0.591 6.591 18 C -0.113 4.113 19 C -0.107 4.107 20 C -0.048 4.048 21 C -0.080 4.080 22 C -0.070 4.070 23 Br 0.097 6.903 24 H 0.386 0.614 25 H 0.138 0.862 26 H -0.272 1.272 27 H -0.276 1.276 28 H 0.142 0.858 29 H 0.072 0.928 30 H 0.073 0.927 31 H 0.077 0.923 32 H 0.073 0.927 33 H 0.067 0.933 34 H 0.078 0.922 35 H 0.393 0.607 36 H 0.065 0.935 37 H 0.065 0.935 38 H 0.067 0.933 39 H 0.079 0.921 40 H 0.174 0.826 41 H 0.182 0.818 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.768 -1.811 3.404 6.132 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.355 6.355 2 C -0.172 4.172 3 Si 0.489 3.511 4 C -0.100 4.100 5 C -0.072 4.072 6 C -0.116 4.116 7 C 0.356 3.644 8 O -0.423 6.423 9 O -0.258 6.258 10 C -0.004 4.004 11 C -0.099 4.099 12 H 0.106 0.894 13 C -0.147 4.147 14 C -0.182 4.182 15 C 0.040 3.960 16 H 0.077 0.923 17 O -0.399 6.399 18 C -0.150 4.150 19 C -0.145 4.145 20 C -0.067 4.067 21 C -0.100 4.100 22 C -0.150 4.150 23 Br 0.183 6.817 24 H 0.235 0.765 25 H 0.156 0.844 26 H -0.197 1.197 27 H -0.201 1.201 28 H 0.160 0.840 29 H 0.091 0.909 30 H 0.091 0.909 31 H 0.095 0.905 32 H 0.092 0.908 33 H 0.085 0.915 34 H 0.097 0.903 35 H 0.243 0.757 36 H 0.083 0.917 37 H 0.084 0.916 38 H 0.086 0.914 39 H 0.098 0.902 40 H 0.192 0.808 41 H 0.199 0.801 Dipole moment (debyes) X Y Z Total from point charges 5.249 -0.664 2.142 5.708 hybrid contribution -2.565 -0.546 0.811 2.745 sum 2.684 -1.210 2.953 4.170 Atomic orbital electron populations 1.86535 1.18009 1.80689 1.50282 1.25057 0.84144 1.09844 0.98164 0.93286 1.02717 0.75305 0.79749 1.20084 0.92881 0.98768 0.98279 1.20989 1.00888 0.93205 0.92117 1.19287 0.94751 1.00898 0.96641 1.21291 0.86299 0.77517 0.79274 1.90869 1.20006 1.61624 1.69811 1.86495 1.43739 1.58458 1.37111 1.23336 0.90696 0.93427 0.92906 1.21224 0.96703 0.97972 0.94028 0.89445 1.21457 0.97252 0.99938 0.96087 1.22185 0.98283 0.99643 0.98085 1.21932 0.92841 0.94187 0.87013 0.92267 1.86488 1.40973 1.72631 1.39811 1.21482 0.97739 0.99584 0.96243 1.21527 0.97888 0.98162 0.96892 1.21799 0.90361 0.95048 0.99502 1.21497 1.02478 0.94357 0.91629 1.21972 0.93206 1.01463 0.98340 1.96363 1.53883 1.61545 1.69887 0.76492 0.84423 1.19745 1.20108 0.84045 0.90939 0.90881 0.90471 0.90796 0.91473 0.90298 0.75741 0.91662 0.91633 0.91413 0.90245 0.80841 0.80074 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -2.77 11.64 -148.98 -1.73 -4.51 16 2 C -0.06 -0.12 2.84 71.24 0.20 0.08 16 3 Si 0.59 2.09 26.81 68.60 1.84 3.93 16 4 C -0.10 -0.04 5.12 -19.89 -0.10 -0.14 16 5 C -0.05 -0.13 8.78 22.53 0.20 0.07 16 6 C -0.11 -0.10 5.87 -20.09 -0.12 -0.22 16 7 C 0.51 2.23 7.90 70.32 0.56 2.79 16 8 O -0.53 -5.78 16.14 19.91 0.32 -5.46 16 9 O -0.34 -0.19 9.01 -56.22 -0.51 -0.70 16 10 C 0.07 -0.08 4.85 71.98 0.35 0.26 16 11 C -0.08 0.34 2.43 -10.79 -0.03 0.31 16 12 H 0.09 -0.35 8.14 -2.39 -0.02 -0.37 16 13 C -0.11 0.59 5.20 30.59 0.16 0.75 16 14 C -0.14 0.65 5.55 30.60 0.17 0.82 16 15 C 0.10 -0.20 3.47 30.60 0.11 -0.09 16 16 H 0.06 -0.18 8.14 -2.39 -0.02 -0.20 16 17 O -0.59 -0.54 13.32 -148.98 -1.98 -2.52 16 18 C -0.11 0.18 5.57 30.61 0.17 0.35 16 19 C -0.11 0.41 5.11 30.61 0.16 0.57 16 20 C -0.05 0.25 9.62 22.53 0.22 0.46 16 21 C -0.08 0.56 9.77 22.25 0.22 0.78 16 22 C -0.07 0.24 5.82 22.39 0.13 0.37 16 23 Br 0.10 -0.54 27.31 -20.37 -0.56 -1.09 16 24 H 0.39 0.05 8.44 -74.05 -0.62 -0.58 16 25 H 0.14 -0.02 7.96 -2.39 -0.02 -0.04 16 26 H -0.27 -2.90 7.11 99.48 0.71 -2.20 16 27 H -0.28 -2.39 7.11 99.48 0.71 -1.69 16 28 H 0.14 0.67 6.68 -2.91 -0.02 0.65 16 29 H 0.07 -0.04 8.14 -2.39 -0.02 -0.06 16 30 H 0.07 -0.05 8.14 -2.39 -0.02 -0.07 16 31 H 0.08 -0.46 8.14 -2.39 -0.02 -0.48 16 32 H 0.07 -0.43 8.14 -2.39 -0.02 -0.45 16 33 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 34 H 0.08 -0.49 8.14 -2.39 -0.02 -0.51 16 35 H 0.39 -2.70 9.08 -74.05 -0.67 -3.38 16 36 H 0.06 -0.02 8.14 -2.39 -0.02 -0.03 16 37 H 0.06 -0.02 8.14 -2.39 -0.02 -0.04 16 38 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 39 H 0.08 -0.31 7.82 -2.38 -0.02 -0.33 16 40 H 0.17 -1.65 7.61 -2.91 -0.02 -1.67 16 41 H 0.18 -2.37 8.06 -2.91 -0.02 -2.40 16 Total: 0.00 -17.09 351.53 -0.44 -17.52 By element: Atomic # 1 Polarization: -14.13 SS G_CDS: -0.20 Total: -14.33 kcal Atomic # 6 Polarization: 4.77 SS G_CDS: 2.38 Total: 7.15 kcal Atomic # 8 Polarization: -9.28 SS G_CDS: -3.90 Total: -13.18 kcal Atomic # 14 Polarization: 2.09 SS G_CDS: 1.84 Total: 3.93 kcal Atomic # 35 Polarization: -0.54 SS G_CDS: -0.56 Total: -1.09 kcal Total: -17.09 -0.44 -17.52 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_13441022_16737258.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -140.179 kcal (2) G-P(sol) polarization free energy of solvation -17.088 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -157.268 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.436 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.525 kcal (6) G-S(sol) free energy of system = (1) + (5) -157.704 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds