Wall clock time and date at job start Sat Mar 6 2021 04:25:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 C 1.39388 * 124.01343 * 2 1 4 4 C 1.39397 * 130.67739 * 359.96992 * 3 2 1 5 5 C 1.37955 * 120.14149 * 180.02562 * 4 3 2 6 6 C 1.38270 * 120.36049 * 0.02562 * 5 4 3 7 7 C 1.38428 * 119.83902 * 359.97438 * 6 5 4 8 8 C 1.37688 * 119.94267 * 0.02562 * 7 6 5 9 9 C 1.51135 * 132.63972 * 180.29125 * 8 7 6 10 10 C 1.52997 * 110.59515 * 61.35934 * 9 8 7 11 11 C 1.52996 * 110.39391 * 298.69615 * 9 8 7 12 12 C 1.35996 * 124.02070 * 179.97438 * 2 1 3 13 13 C 1.35569 * 126.54640 * 359.97438 * 12 2 1 14 14 C 1.40196 * 120.00137 * 327.27505 * 13 12 2 15 15 O 1.21538 * 119.99876 * 352.88848 * 14 13 12 16 16 C 1.50701 * 120.00013 * 172.89529 * 14 13 12 17 17 O 1.45203 * 109.46833 * 179.97438 * 16 14 13 18 18 C 1.34719 * 116.99673 * 179.97438 * 17 16 14 19 19 O 1.21475 * 120.00172 * 0.02562 * 18 17 16 20 20 C 1.47679 * 119.99503 * 179.97438 * 18 17 16 21 21 C 1.39641 * 120.14250 * 0.02562 * 20 18 17 22 22 C 1.37920 * 119.85680 * 179.97438 * 21 20 18 23 23 C 1.38458 * 120.14147 * 0.02562 * 22 21 20 24 24 Br 1.89103 * 119.86114 * 179.97438 * 23 22 21 25 25 C 1.38514 * 120.28233 * 0.02562 * 23 22 21 26 26 C 1.50699 * 119.92963 * 179.97438 * 25 23 22 27 27 O 1.42908 * 109.47163 * 72.10418 * 26 25 23 28 28 Si 1.86301 * 109.47229 * 192.10229 * 26 25 23 29 29 H 1.48499 * 109.47012 * 45.86250 * 28 26 25 30 30 H 1.48500 * 109.47291 * 285.86795 * 28 26 25 31 31 H 1.48499 * 109.47178 * 165.86184 * 28 26 25 32 32 C 1.37874 * 120.13993 * 0.25248 * 25 23 22 33 33 H 1.08994 * 109.47173 * 269.22538 * 1 2 3 34 34 H 1.09002 * 109.47208 * 29.22679 * 1 2 3 35 35 H 1.09006 * 109.46573 * 149.22649 * 1 2 3 36 36 H 1.08000 * 119.92694 * 0.02562 * 4 3 2 37 37 H 1.08001 * 119.82408 * 180.02562 * 5 4 3 38 38 H 1.07994 * 120.08037 * 180.02562 * 6 5 4 39 39 H 1.08002 * 120.02695 * 180.02562 * 7 6 5 40 40 H 1.08995 * 109.47485 * 174.79184 * 10 9 8 41 41 H 1.09000 * 109.47361 * 294.79457 * 10 9 8 42 42 H 1.09006 * 109.47153 * 54.79273 * 10 9 8 43 43 H 1.08992 * 109.47305 * 305.32260 * 11 9 8 44 44 H 1.09002 * 109.47206 * 65.32611 * 11 9 8 45 45 H 1.09004 * 109.47461 * 185.32158 * 11 9 8 46 46 H 1.08004 * 119.99862 * 147.26874 * 13 12 2 47 47 H 1.08990 * 109.47506 * 59.99710 * 16 14 13 48 48 H 1.08997 * 109.47026 * 299.99077 * 16 14 13 49 49 H 1.08001 * 120.06922 * 359.97398 * 21 20 18 50 50 H 1.08002 * 119.92424 * 179.97438 * 22 21 20 51 51 H 1.09001 * 109.47467 * 312.10651 * 26 25 23 52 52 H 0.96700 * 113.99764 * 59.99861 * 27 26 25 53 53 H 1.07999 * 120.06876 * 179.72760 * 32 25 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2448 1.1554 0.0000 4 6 1.8767 2.4999 -0.0006 5 6 2.8445 3.4830 -0.0010 6 6 4.1850 3.1441 -0.0013 7 6 4.5585 1.8111 -0.0008 8 6 3.5950 0.8275 -0.0004 9 6 3.6728 -0.6818 0.0059 10 6 4.3815 -1.1789 1.2674 11 6 4.3925 -1.1838 -1.2475 12 6 2.2259 -1.1272 0.0005 13 6 1.7749 -2.4056 0.0016 14 6 0.5787 -2.7264 0.6586 15 8 0.0134 -1.8895 1.3347 16 6 -0.0061 -4.1091 0.5267 17 8 -1.2357 -4.1898 1.2948 18 6 -1.8885 -5.3682 1.2820 19 8 -1.4426 -6.3027 0.6469 20 6 -3.1457 -5.5240 2.0410 21 6 -3.6607 -4.4517 2.7725 22 6 -4.8355 -4.6036 3.4788 23 6 -5.5038 -5.8161 3.4640 24 35 -7.1137 -6.0158 4.4358 25 6 -4.9977 -6.8838 2.7412 26 6 -5.7314 -8.2001 2.7311 27 8 -6.9206 -8.0767 1.9483 28 14 -4.6368 -9.5155 1.9946 29 1 -3.2770 -9.4144 2.5828 30 1 -4.5553 -9.3255 0.5241 31 1 -5.2055 -10.8552 2.2899 32 6 -3.8212 -6.7466 2.0356 33 1 -0.3633 -0.0139 1.0275 34 1 -0.3634 0.8968 -0.5018 35 1 -0.3633 -0.8830 -0.5258 36 1 0.8317 2.7725 -0.0007 37 1 2.5536 4.5231 -0.0010 38 1 4.9389 3.9174 -0.0012 39 1 5.6047 1.5430 -0.0007 40 1 4.3461 -2.2678 1.2989 41 1 5.4205 -0.8494 1.2543 42 1 3.8829 -0.7736 2.1479 43 1 3.9017 -0.7819 -2.1338 44 1 5.4313 -0.8542 -1.2265 45 1 4.3574 -2.2729 -1.2750 46 1 2.3371 -3.1770 -0.5039 47 1 0.7064 -4.8425 0.9040 48 1 -0.2186 -4.3151 -0.5224 49 1 -3.1400 -3.5056 2.7851 50 1 -5.2345 -3.7751 4.0452 51 1 -5.9955 -8.4768 3.7518 52 1 -6.7609 -7.8319 1.0265 53 1 -3.4253 -7.5812 1.4760 RHF calculation, no. of doubly occupied orbitals= 76 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_13441022_485200.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 04:25:15 Heat of formation + Delta-G solvation = -38.917951 kcal Electronic energy + Delta-G solvation = -38442.592897 eV Core-core repulsion = 33372.980269 eV Total energy + Delta-G solvation = -5069.612628 eV No. of doubly occupied orbitals = 76 Molecular weight (most abundant/longest-lived isotopes) = 473.084 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -42.89472 -41.98196 -40.72409 -40.08709 -38.25327 -37.70283 -37.50042 -36.28771 -33.87778 -33.03969 -32.94763 -31.37604 -31.21670 -30.74952 -29.73876 -28.32904 -27.97073 -26.97387 -25.50469 -24.74677 -23.37259 -23.25440 -22.68276 -21.91167 -20.93220 -19.91537 -19.29140 -18.65169 -17.96391 -17.87885 -17.75628 -17.72428 -17.26137 -16.87548 -16.73456 -16.68362 -16.34589 -16.05294 -15.89958 -15.78512 -15.40768 -15.12643 -15.08911 -14.95978 -14.82782 -14.76381 -14.51370 -14.40306 -14.21977 -13.94357 -13.70589 -13.46271 -13.35092 -13.17613 -13.12409 -12.93873 -12.89347 -12.53631 -12.44250 -12.42486 -12.32605 -12.30471 -12.04940 -12.01546 -12.00248 -11.86637 -11.80523 -11.64764 -11.17660 -10.54496 -10.52389 -10.31660 -10.03711 -10.02606 -9.91125 -8.50626 -0.82986 -0.39464 -0.11311 0.29385 0.42250 0.64390 1.02796 1.11262 1.26247 1.37501 1.43935 1.56177 1.83061 1.90227 2.29104 2.71951 2.88659 3.17750 3.23842 3.26481 3.42969 3.51731 3.56062 3.73284 3.86700 3.88380 3.94990 4.01089 4.04628 4.06537 4.09209 4.12335 4.17534 4.21445 4.36389 4.41090 4.42267 4.49382 4.54226 4.64292 4.68032 4.71299 4.71969 4.73750 4.77647 4.83288 4.83422 4.85363 4.90629 4.99587 5.02099 5.09677 5.14771 5.24006 5.32204 5.32546 5.41960 5.50931 5.69575 5.99875 6.04370 6.39766 6.63056 6.82382 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.091 3.909 2 N -0.504 5.504 3 C 0.100 3.900 4 C -0.146 4.146 5 C -0.091 4.091 6 C -0.138 4.138 7 C -0.070 4.070 8 C -0.141 4.141 9 C -0.008 4.008 10 C -0.123 4.123 11 C -0.126 4.126 12 C 0.282 3.718 13 C -0.400 4.400 14 C 0.385 3.615 15 O -0.519 6.519 16 C 0.023 3.977 17 O -0.337 6.337 18 C 0.510 3.490 19 O -0.525 6.525 20 C -0.119 4.119 21 C -0.041 4.041 22 C -0.098 4.098 23 C -0.039 4.039 24 Br -0.022 7.022 25 C -0.106 4.106 26 C -0.078 4.078 27 O -0.533 6.533 28 Si 0.964 3.036 29 H -0.262 1.262 30 H -0.246 1.246 31 H -0.258 1.258 32 C -0.060 4.060 33 H 0.080 0.920 34 H 0.084 0.916 35 H 0.074 0.926 36 H 0.131 0.869 37 H 0.151 0.849 38 H 0.153 0.847 39 H 0.150 0.850 40 H 0.081 0.919 41 H 0.090 0.910 42 H 0.041 0.959 43 H 0.052 0.948 44 H 0.086 0.914 45 H 0.083 0.917 46 H 0.171 0.829 47 H 0.110 0.890 48 H 0.111 0.889 49 H 0.161 0.839 50 H 0.166 0.834 51 H 0.129 0.871 52 H 0.389 0.611 53 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.404 4.729 -2.249 7.525 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.050 4.050 2 N -0.192 5.192 3 C 0.005 3.995 4 C -0.167 4.167 5 C -0.110 4.110 6 C -0.156 4.156 7 C -0.088 4.088 8 C -0.143 4.143 9 C -0.009 4.009 10 C -0.180 4.180 11 C -0.184 4.184 12 C 0.166 3.834 13 C -0.427 4.427 14 C 0.274 3.726 15 O -0.404 6.404 16 C -0.051 4.051 17 O -0.253 6.253 18 C 0.356 3.644 19 O -0.416 6.416 20 C -0.121 4.121 21 C -0.060 4.060 22 C -0.118 4.118 23 C -0.120 4.120 24 Br 0.065 6.935 25 C -0.108 4.108 26 C -0.189 4.189 27 O -0.340 6.340 28 Si 0.788 3.212 29 H -0.186 1.186 30 H -0.170 1.170 31 H -0.183 1.183 32 C -0.079 4.079 33 H 0.098 0.902 34 H 0.103 0.897 35 H 0.092 0.908 36 H 0.149 0.851 37 H 0.169 0.831 38 H 0.171 0.829 39 H 0.168 0.832 40 H 0.100 0.900 41 H 0.108 0.892 42 H 0.060 0.940 43 H 0.071 0.929 44 H 0.105 0.895 45 H 0.102 0.898 46 H 0.188 0.812 47 H 0.128 0.872 48 H 0.129 0.871 49 H 0.179 0.821 50 H 0.184 0.816 51 H 0.147 0.853 52 H 0.238 0.762 53 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 4.655 4.120 -1.547 6.406 hybrid contribution 0.077 0.253 -0.589 0.645 sum 4.732 4.373 -2.136 6.788 Atomic orbital electron populations 1.22210 0.75976 1.03123 1.03663 1.44720 1.07346 1.03890 1.63268 1.18745 0.90891 0.88162 1.01675 1.20670 1.01319 0.89165 1.05524 1.21253 0.92646 0.99858 0.97205 1.21500 0.96731 0.96377 1.01010 1.20603 0.99557 0.91386 0.97239 1.20168 0.92513 0.95266 1.06355 1.19470 0.90558 0.90620 1.00256 1.21745 1.00712 1.02468 0.93101 1.21763 1.00834 1.02585 0.93188 1.21216 0.91520 0.87264 0.83391 1.20419 1.05237 0.95332 1.21749 1.20051 0.83990 0.87294 0.81221 1.90618 1.62271 1.49730 1.37783 1.23624 0.83996 0.99807 0.97640 1.86599 1.37452 1.34795 1.66472 1.21304 0.84226 0.80397 0.78462 1.90846 1.67605 1.41154 1.41964 1.19143 0.94152 0.96296 1.02495 1.21704 0.94146 0.98603 0.91561 1.21460 0.94453 0.96684 0.99177 1.22240 0.94635 0.96313 0.98790 1.96842 1.27596 1.98014 1.71091 1.20238 0.95412 0.97156 0.98013 1.25015 0.93426 0.97956 1.02527 1.86569 1.28583 1.92388 1.26460 0.85487 0.77239 0.77859 0.80655 1.18628 1.16972 1.18263 1.21145 0.93277 0.96641 0.96824 0.90163 0.89723 0.90772 0.85062 0.83083 0.82901 0.83219 0.90025 0.89167 0.94016 0.92858 0.89541 0.89788 0.81159 0.87182 0.87107 0.82121 0.81645 0.85317 0.76211 0.84074 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 0.33 8.71 127.77 1.11 1.44 16 2 N -0.50 -2.22 3.13 -523.22 -1.64 -3.86 16 3 C 0.10 0.35 6.69 38.39 0.26 0.60 16 4 C -0.15 -0.13 9.73 22.48 0.22 0.09 16 5 C -0.09 0.21 10.02 22.21 0.22 0.43 16 6 C -0.14 0.47 10.07 22.32 0.22 0.70 16 7 C -0.07 0.18 10.04 22.18 0.22 0.40 16 8 C -0.14 -0.10 4.98 -19.69 -0.10 -0.20 16 9 C -0.01 0.01 0.95 -53.32 -0.05 -0.04 16 10 C -0.12 0.34 8.57 71.98 0.62 0.96 16 11 C -0.13 0.64 8.56 71.98 0.62 1.25 16 12 C 0.28 0.77 5.24 41.52 0.22 0.99 16 13 C -0.40 -0.62 9.19 22.13 0.20 -0.41 16 14 C 0.38 2.01 5.82 26.16 0.15 2.16 16 15 O -0.52 -5.51 12.02 14.94 0.18 -5.33 16 16 C 0.02 0.08 5.82 71.24 0.41 0.49 16 17 O -0.34 -2.40 9.01 -49.91 -0.45 -2.85 16 18 C 0.51 3.95 7.90 70.32 0.56 4.51 16 19 O -0.52 -6.11 16.14 19.92 0.32 -5.79 16 20 C -0.12 -0.55 5.87 -20.10 -0.12 -0.66 16 21 C -0.04 -0.05 9.62 22.53 0.22 0.17 16 22 C -0.10 0.03 9.77 22.25 0.22 0.24 16 23 C -0.04 -0.07 6.23 22.39 0.14 0.07 16 24 Br -0.02 -0.05 31.86 -20.37 -0.65 -0.70 16 25 C -0.11 -0.20 5.29 -19.89 -0.11 -0.31 16 26 C -0.08 -0.02 2.00 71.24 0.14 0.12 16 27 O -0.53 -0.15 12.49 -148.98 -1.86 -2.02 16 28 Si 0.96 0.85 25.16 68.60 1.73 2.58 16 29 H -0.26 -0.84 7.09 99.48 0.71 -0.14 16 30 H -0.25 -0.26 7.11 99.48 0.71 0.44 16 31 H -0.26 -0.74 7.11 99.48 0.71 -0.04 16 32 C -0.06 -0.22 8.21 22.53 0.18 -0.03 16 33 H 0.08 0.56 6.46 -2.39 -0.02 0.55 16 34 H 0.08 -0.03 7.58 -2.39 -0.02 -0.05 16 35 H 0.07 0.31 6.41 -2.38 -0.02 0.30 16 36 H 0.13 -0.19 7.67 -2.91 -0.02 -0.21 16 37 H 0.15 -1.02 8.06 -2.91 -0.02 -1.04 16 38 H 0.15 -1.24 8.06 -2.91 -0.02 -1.27 16 39 H 0.15 -1.10 8.06 -2.91 -0.02 -1.12 16 40 H 0.08 -0.35 8.12 -2.39 -0.02 -0.37 16 41 H 0.09 -0.56 8.14 -2.39 -0.02 -0.58 16 42 H 0.04 0.06 8.14 -2.38 -0.02 0.04 16 43 H 0.05 -0.15 8.14 -2.39 -0.02 -0.17 16 44 H 0.09 -0.66 8.14 -2.39 -0.02 -0.68 16 45 H 0.08 -0.61 7.91 -2.38 -0.02 -0.63 16 46 H 0.17 -0.66 7.85 -2.91 -0.02 -0.68 16 47 H 0.11 0.12 8.14 -2.39 -0.02 0.10 16 48 H 0.11 0.09 8.14 -2.39 -0.02 0.07 16 49 H 0.16 -0.08 7.61 -2.91 -0.02 -0.10 16 50 H 0.17 -0.71 8.06 -2.91 -0.02 -0.74 16 51 H 0.13 -0.06 7.36 -2.39 -0.02 -0.08 16 52 H 0.39 -2.28 8.70 -74.06 -0.64 -2.92 16 53 H 0.14 0.52 4.61 -2.91 -0.01 0.51 16 Total: 0.00 -18.07 451.69 4.27 -13.80 By element: Atomic # 1 Polarization: -9.88 SS G_CDS: 1.08 Total: -8.80 kcal Atomic # 6 Polarization: 7.41 SS G_CDS: 5.56 Total: 12.97 kcal Atomic # 7 Polarization: -2.22 SS G_CDS: -1.64 Total: -3.86 kcal Atomic # 8 Polarization: -14.18 SS G_CDS: -1.81 Total: -15.99 kcal Atomic # 14 Polarization: 0.85 SS G_CDS: 1.73 Total: 2.58 kcal Atomic # 35 Polarization: -0.05 SS G_CDS: -0.65 Total: -0.70 kcal Total: -18.07 4.27 -13.80 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_13441022_485200.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -25.117 kcal (2) G-P(sol) polarization free energy of solvation -18.075 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -43.191 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.273 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.801 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.918 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds