Wall clock time and date at job start Sat Mar 6 2021 03:51:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35647 * 116.99534 * 2 1 4 4 C 1.40195 * 120.15206 * 180.02562 * 3 2 1 5 5 C 1.47399 * 120.20077 * 359.96713 * 4 3 2 6 6 O 1.21509 * 120.00038 * 359.73394 * 5 4 3 7 7 O 1.34754 * 120.00106 * 179.72629 * 5 4 3 8 8 C 1.45203 * 116.99754 * 180.02562 * 7 5 4 9 9 C 1.50700 * 109.46843 * 180.02562 * 8 7 5 10 10 O 1.20753 * 120.00047 * 0.02562 * 9 8 7 11 11 C 1.50696 * 119.99818 * 179.97438 * 9 8 7 12 12 H 1.09004 * 109.47525 * 45.93453 * 11 9 8 13 13 C 1.52997 * 109.47134 * 165.93537 * 11 9 8 14 14 C 1.52999 * 109.47136 * 60.00284 * 13 11 9 15 15 C 1.53006 * 109.47174 * 59.99832 * 14 13 11 16 16 H 1.09002 * 109.46955 * 60.00184 * 15 14 13 17 17 C 1.53002 * 109.46995 * 180.02562 * 15 14 13 18 18 F 1.39904 * 109.46895 * 179.97438 * 17 15 14 19 19 F 1.39902 * 109.47244 * 299.99884 * 17 15 14 20 20 F 1.39895 * 109.47398 * 60.00139 * 17 15 14 21 21 C 1.52997 * 109.47227 * 300.00113 * 15 14 13 22 22 C 1.52997 * 109.47310 * 285.93816 * 11 9 8 23 23 C 1.39769 * 119.60283 * 179.70191 * 4 3 2 24 24 C 1.37765 * 119.90388 * 0.27440 * 23 4 3 25 25 C 1.38563 * 120.30533 * 359.97438 * 24 23 4 26 26 C 1.50700 * 119.79469 * 180.02562 * 25 24 23 27 27 O 1.42900 * 109.47291 * 245.00272 * 26 25 24 28 28 Si 1.86300 * 109.47405 * 5.00615 * 26 25 24 29 29 C 1.38052 * 120.40718 * 359.97438 * 25 24 23 30 30 H 1.09001 * 109.47464 * 60.00549 * 1 2 3 31 31 H 1.09006 * 109.46866 * 179.97438 * 1 2 3 32 32 H 1.08995 * 109.47142 * 299.99810 * 1 2 3 33 33 H 1.09001 * 109.47009 * 60.00572 * 8 7 5 34 34 H 1.09006 * 109.46993 * 300.00446 * 8 7 5 35 35 H 1.09002 * 109.47211 * 180.02562 * 13 11 9 36 36 H 1.09000 * 109.47412 * 300.00160 * 13 11 9 37 37 H 1.08994 * 109.47548 * 180.02562 * 14 13 11 38 38 H 1.09002 * 109.47029 * 300.00061 * 14 13 11 39 39 H 1.09002 * 109.47078 * 300.00454 * 21 15 14 40 40 H 1.09000 * 109.47412 * 179.97438 * 21 15 14 41 41 H 1.08997 * 109.47556 * 59.99968 * 22 11 9 42 42 H 1.09002 * 109.47587 * 180.02562 * 22 11 9 43 43 H 1.08005 * 120.04756 * 180.24580 * 23 4 3 44 44 H 1.08001 * 119.84953 * 179.97438 * 24 23 4 45 45 H 1.08999 * 109.47193 * 125.00324 * 26 25 24 46 46 H 0.96701 * 113.99885 * 60.00778 * 27 26 25 47 47 H 1.48504 * 110.00207 * 180.02562 * 28 26 25 48 48 H 1.48505 * 109.99862 * 301.31646 * 28 26 25 49 49 H 1.07991 * 119.95805 * 180.02562 * 29 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0447 1.2087 0.0000 4 6 3.4445 1.2859 -0.0005 5 6 4.2550 0.0547 -0.0004 6 8 3.7102 -1.0314 0.0051 7 8 5.6002 0.1336 -0.0065 8 6 6.3340 -1.1194 -0.0065 9 6 7.8139 -0.8348 -0.0131 10 8 8.2093 0.3061 -0.0168 11 6 8.8002 -1.9741 -0.0138 12 1 8.4949 -2.7187 -0.7490 13 6 10.1905 -1.4449 -0.3712 14 6 10.6193 -0.3998 0.6608 15 6 10.6591 -1.0409 2.0495 16 1 11.3725 -1.8650 2.0489 17 6 11.0872 0.0044 3.0816 18 9 11.1230 -0.5817 4.3515 19 9 12.3584 0.4888 2.7550 20 9 10.1712 1.0617 3.0821 21 6 9.2688 -1.5701 2.4069 22 6 8.8400 -2.6152 1.3748 23 6 4.0670 2.5373 -0.0069 24 6 3.3036 3.6841 -0.0068 25 6 1.9204 3.6033 -0.0010 26 6 1.0965 4.8652 -0.0016 27 8 0.3643 4.9566 1.2222 28 14 2.2215 6.3413 -0.1638 29 6 1.2923 2.3739 0.0042 30 1 -0.3634 0.5137 -0.8900 31 1 -0.3633 -1.0277 -0.0005 32 1 -0.3633 0.5138 0.8900 33 1 6.0704 -1.6948 -0.8939 34 1 6.0780 -1.6904 0.8861 35 1 10.9039 -2.2690 -0.3722 36 1 10.1622 -0.9882 -1.3606 37 1 11.6095 -0.0224 0.4059 38 1 9.9058 0.4243 0.6613 39 1 8.5553 -0.7461 2.4074 40 1 9.2972 -2.0272 3.3961 41 1 7.8496 -2.9923 1.6295 42 1 9.5538 -3.4390 1.3745 43 1 5.1449 2.6051 -0.0113 44 1 3.7855 4.6506 -0.0112 45 1 0.4009 4.8446 -0.8405 46 1 0.9208 4.9796 2.0127 47 1 1.4212 7.5922 -0.1650 48 1 3.1955 6.3632 0.9570 49 1 0.2138 2.3194 0.0083 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_13470092_12428076.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 03:51:16 Heat of formation + Delta-G solvation = -310.425030 kcal Electronic energy + Delta-G solvation = -39298.112236 eV Core-core repulsion = 33549.712414 eV Total energy + Delta-G solvation = -5748.399822 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 403.142 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -50.98638 -48.47796 -48.43393 -42.07496 -41.65795 -40.62150 -39.20972 -38.46439 -37.51436 -37.17360 -33.67106 -33.18247 -32.16996 -31.44174 -30.24162 -28.63733 -27.64382 -26.75997 -24.25963 -24.06032 -23.65035 -23.30932 -22.17439 -21.87378 -20.32758 -19.41591 -19.15170 -19.09759 -18.81538 -18.58761 -18.16185 -18.01462 -17.77101 -16.99497 -16.90872 -16.86080 -16.58749 -16.27652 -16.03703 -15.89736 -15.68312 -15.43471 -15.32123 -15.16511 -14.98812 -14.93545 -14.81665 -14.64931 -14.61244 -14.51392 -14.40115 -14.10410 -13.85039 -13.70294 -13.59058 -13.46397 -13.42655 -13.36060 -12.99357 -12.92190 -12.71621 -12.35662 -12.32265 -12.21213 -12.19803 -11.82660 -11.72685 -11.56355 -11.47894 -11.42695 -10.76856 -10.36614 -10.20119 -9.46031 -5.02522 -0.48570 0.21861 0.71160 1.15676 1.34109 1.48146 1.53343 1.83410 1.88926 2.10525 2.54762 2.69786 2.85453 2.96273 3.07883 3.18746 3.37365 3.40286 3.47789 3.62867 3.66662 3.72129 3.79401 3.89252 3.90635 3.95465 3.99575 4.02632 4.03952 4.07545 4.14571 4.15494 4.20390 4.27843 4.31210 4.41649 4.44995 4.53114 4.61239 4.64941 4.66158 4.75358 4.86270 4.87212 4.94680 4.97359 5.00502 5.18427 5.27424 5.29648 5.47008 6.17465 6.25589 6.33637 6.78562 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.283 6.283 3 C 0.194 3.806 4 C -0.161 4.161 5 C 0.510 3.490 6 O -0.485 6.485 7 O -0.338 6.338 8 C 0.016 3.984 9 C 0.360 3.640 10 O -0.413 6.413 11 C -0.133 4.133 12 H 0.111 0.889 13 C -0.099 4.099 14 C -0.145 4.145 15 C -0.130 4.130 16 H 0.114 0.886 17 C 0.452 3.548 18 F -0.185 7.185 19 F -0.183 7.183 20 F -0.180 7.180 21 C -0.129 4.129 22 C -0.105 4.105 23 C -0.014 4.014 24 C -0.172 4.172 25 C -0.039 4.039 26 C -0.083 4.083 27 O -0.527 6.527 28 Si 0.691 3.309 29 C -0.198 4.198 30 H 0.060 0.940 31 H 0.106 0.894 32 H 0.060 0.940 33 H 0.107 0.893 34 H 0.106 0.894 35 H 0.077 0.923 36 H 0.077 0.923 37 H 0.076 0.924 38 H 0.113 0.887 39 H 0.075 0.925 40 H 0.084 0.916 41 H 0.081 0.919 42 H 0.087 0.913 43 H 0.152 0.848 44 H 0.138 0.862 45 H 0.123 0.877 46 H 0.378 0.622 47 H -0.255 1.255 48 H -0.256 1.256 49 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.492 -2.645 -3.421 4.352 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.194 6.194 3 C 0.146 3.854 4 C -0.163 4.163 5 C 0.355 3.645 6 O -0.373 6.373 7 O -0.255 6.255 8 C -0.059 4.059 9 C 0.232 3.768 10 O -0.284 6.284 11 C -0.152 4.152 12 H 0.129 0.871 13 C -0.136 4.136 14 C -0.181 4.181 15 C -0.149 4.149 16 H 0.132 0.868 17 C 0.398 3.602 18 F -0.167 7.167 19 F -0.165 7.165 20 F -0.161 7.161 21 C -0.166 4.166 22 C -0.143 4.143 23 C -0.032 4.032 24 C -0.190 4.190 25 C -0.040 4.040 26 C -0.193 4.193 27 O -0.333 6.333 28 Si 0.592 3.408 29 C -0.216 4.216 30 H 0.079 0.921 31 H 0.125 0.875 32 H 0.079 0.921 33 H 0.125 0.875 34 H 0.124 0.876 35 H 0.096 0.904 36 H 0.096 0.904 37 H 0.095 0.905 38 H 0.131 0.869 39 H 0.094 0.906 40 H 0.103 0.897 41 H 0.099 0.901 42 H 0.106 0.894 43 H 0.169 0.831 44 H 0.156 0.844 45 H 0.141 0.859 46 H 0.226 0.774 47 H -0.180 1.180 48 H -0.181 1.181 49 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges -0.560 -1.819 -3.435 3.927 hybrid contribution -0.473 -0.409 1.365 1.502 sum -1.033 -2.227 -2.070 3.211 Atomic orbital electron populations 1.23255 0.77735 1.04836 1.01737 1.86335 1.21656 1.25165 1.86259 1.19032 0.90427 0.85290 0.90646 1.18396 0.89377 0.92000 1.16526 1.20862 0.80680 0.89396 0.73609 1.90913 1.72458 1.29203 1.44678 1.86612 1.19480 1.34571 1.84837 1.23482 0.90989 0.85883 1.05509 1.24481 0.89694 0.90902 0.71674 1.90333 1.80539 1.24307 1.33183 1.21738 0.95834 0.97356 1.00288 0.87098 1.21367 0.94096 0.98788 0.99388 1.22089 1.04634 1.00534 0.90888 1.22496 1.00761 0.96919 0.94734 0.86791 1.20629 0.74973 0.82634 0.81952 1.93184 1.96256 1.83898 1.43325 1.93187 1.41494 1.89385 1.92406 1.93194 1.66643 1.59725 1.96565 1.21714 0.94586 0.99870 1.00434 1.21488 1.03471 0.97870 0.91442 1.21352 1.01121 0.89720 0.91025 1.20963 0.92860 0.98997 1.06191 1.20385 0.93936 0.95308 0.94356 1.25188 1.02098 1.01720 0.90246 1.86620 1.35954 1.95478 1.15247 0.94754 0.79409 0.76208 0.90420 1.21072 1.00819 0.90699 1.09032 0.92120 0.87522 0.92145 0.87503 0.87637 0.90400 0.90401 0.90515 0.86927 0.90587 0.89725 0.90051 0.89430 0.83058 0.84423 0.85895 0.77384 1.17989 1.18111 0.83925 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.28 -0.83 8.57 -40.52 -0.35 -1.18 16 3 C 0.19 0.43 6.70 -38.67 -0.26 0.18 16 4 C -0.16 -0.39 5.89 -104.86 -0.62 -1.00 16 5 C 0.51 1.78 7.89 34.46 0.27 2.05 16 6 O -0.49 -2.73 14.95 -26.60 -0.40 -3.13 16 7 O -0.34 -0.72 9.01 -47.34 -0.43 -1.15 16 8 C 0.02 -0.01 5.87 36.01 0.21 0.20 16 9 C 0.36 -0.34 5.12 -29.04 -0.15 -0.49 16 10 O -0.41 -0.86 13.37 -13.71 -0.18 -1.04 16 11 C -0.13 0.47 2.94 -91.78 -0.27 0.20 16 12 H 0.11 -0.63 8.14 -51.93 -0.42 -1.05 16 13 C -0.10 0.27 5.21 -26.73 -0.14 0.13 16 14 C -0.14 0.12 4.67 -26.73 -0.12 -0.01 16 15 C -0.13 0.15 2.17 -90.62 -0.20 -0.04 16 16 H 0.11 -0.32 8.14 -51.93 -0.42 -0.74 16 17 C 0.45 0.70 2.69 37.16 0.10 0.80 16 18 F -0.19 -0.42 16.80 2.25 0.04 -0.38 16 19 F -0.18 -0.47 16.80 2.25 0.04 -0.43 16 20 F -0.18 -0.57 16.28 2.25 0.04 -0.54 16 21 C -0.13 0.25 4.74 -26.73 -0.13 0.13 16 22 C -0.11 0.43 5.42 -26.73 -0.14 0.29 16 23 C -0.01 -0.01 9.61 -39.18 -0.38 -0.38 16 24 C -0.17 0.13 8.64 -39.63 -0.34 -0.22 16 25 C -0.04 0.02 5.36 -104.57 -0.56 -0.54 16 26 C -0.08 0.10 2.79 36.01 0.10 0.20 16 27 O -0.53 -0.11 12.83 -35.23 -0.45 -0.57 16 28 Si 0.69 -1.20 29.86 -169.99 -5.08 -6.28 16 29 C -0.20 -0.08 8.65 -39.48 -0.34 -0.42 16 30 H 0.06 -0.14 7.67 -51.93 -0.40 -0.54 16 31 H 0.11 -0.23 8.14 -51.93 -0.42 -0.66 16 32 H 0.06 -0.12 7.65 -51.93 -0.40 -0.51 16 33 H 0.11 -0.23 8.14 -51.93 -0.42 -0.65 16 34 H 0.11 -0.21 7.84 -51.93 -0.41 -0.61 16 35 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 36 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 37 H 0.08 -0.06 7.80 -51.93 -0.41 -0.46 16 38 H 0.11 0.15 4.72 -51.93 -0.25 -0.09 16 39 H 0.08 -0.03 6.84 -51.93 -0.36 -0.39 16 40 H 0.08 -0.19 7.80 -51.93 -0.41 -0.60 16 41 H 0.08 -0.41 7.84 -51.93 -0.41 -0.81 16 42 H 0.09 -0.45 8.14 -51.93 -0.42 -0.87 16 43 H 0.15 -0.10 7.61 -52.48 -0.40 -0.50 16 44 H 0.14 -0.35 4.81 -52.49 -0.25 -0.60 16 45 H 0.12 -0.27 7.96 -51.93 -0.41 -0.68 16 46 H 0.38 -0.93 8.70 45.56 0.40 -0.53 16 47 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 48 H -0.26 -0.04 7.00 56.52 0.40 0.36 16 49 H 0.14 -0.12 6.30 -52.49 -0.33 -0.45 16 LS Contribution 407.28 15.07 6.14 6.14 Total: 0.00 -9.48 407.28 -8.79 -18.27 By element: Atomic # 1 Polarization: -5.57 SS G_CDS: -6.18 Total: -11.75 kcal Atomic # 6 Polarization: 4.01 SS G_CDS: -1.97 Total: 2.04 kcal Atomic # 8 Polarization: -5.26 SS G_CDS: -1.81 Total: -7.07 kcal Atomic # 9 Polarization: -1.46 SS G_CDS: 0.11 Total: -1.35 kcal Atomic # 14 Polarization: -1.20 SS G_CDS: -5.08 Total: -6.28 kcal Total LS contribution 6.14 Total: 6.14 kcal Total: -9.48 -8.79 -18.27 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_13470092_12428076.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -292.155 kcal (2) G-P(sol) polarization free energy of solvation -9.482 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -301.637 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.788 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.270 kcal (6) G-S(sol) free energy of system = (1) + (5) -310.425 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds